CircRNA Information

General Information
circRNA Basic Information
CircID chr1:156738394|156738585
Strand -
CircType exon
Host Gene ENSG00000143314.11;
Algorism CIRI2;
Sequence CACTTTGCCCTGCTTCCCGGCATCCTTGCCTTCTAGGATCTCCACCTGTGGGAAGATACGAAGGTTAGGGAGGGGGATCCTTGCCCAGGAGGTTCCCCATCACTCTACCCCCTGTATGAGGCTCTCACCGTGTCCCCACAGAACAGATACCAGTCTTCATCAGAGATGGGTTCCACAACCACTGGGCGCCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:156738394|156738585 hsa-miR-520g-5p 0 0 1
chr1:156738394|156738585 hsa-miR-520g-3p 0 0 1
chr1:156738394|156738585 hsa-miR-520h 0 0 1
chr1:156738394|156738585 hsa-miR-552-5p 0 0 1
chr1:156738394|156738585 hsa-miR-552-3p 0 0 1
chr1:156738394|156738585 hsa-miR-612 0 1 1
chr1:156738394|156738585 hsa-miR-620 0 0 1
chr1:156738394|156738585 hsa-miR-1270 0 1 1
chr1:156738394|156738585 hsa-miR-140-5p 0 1 1
chr1:156738394|156738585 hsa-miR-491-5p 0 1 1
chr1:156738394|156738585 hsa-miR-188-3p 0 0 1
chr1:156738394|156738585 hsa-miR-485-3p 0 0 1
chr1:156738394|156738585 hsa-miR-1260 0 0 1
chr1:156738394|156738585 hsa-miR-1285 0 0 1
chr1:156738394|156738585 hsa-miR-453 0 0 1
chr1:156738394|156738585 hsa-miR-608 1 1 0
chr1:156738394|156738585 hsa-miR-3131 1 0 0
chr1:156738394|156738585 hsa-miR-4281 1 0 0
chr1:156738394|156738585 hsa-miR-3911 1 0 0
chr1:156738394|156738585 hsa-miR-4460 0 1 0
chr1:156738394|156738585 hsa-miR-4462 0 1 0
chr1:156738394|156738585 hsa-miR-4463 1 0 0
chr1:156738394|156738585 hsa-miR-4466 1 0 0
chr1:156738394|156738585 hsa-miR-4502 1 1 0
chr1:156738394|156738585 hsa-miR-6860 0 1 0
chr1:156738394|156738585 hsa-miR-12114 0 1 0
chr1:156738394|156738585 hsa-miR-12119 1 0 0
chr1:156738394|156738585 hsa-miR-141-5p 0 1 0
chr1:156738394|156738585 hsa-miR-6510-5p 0 1 0
chr1:156738394|156738585 hsa-miR-6089 1 0 0
chr1:156738394|156738585 hsa-miR-6880-5p 1 1 0
chr1:156738394|156738585 hsa-miR-197-5p 0 1 0
chr1:156738394|156738585 hsa-miR-6796-5p 1 0 0
chr1:156738394|156738585 hsa-miR-6732-5p 0 1 0
chr1:156738394|156738585 hsa-miR-6798-5p 1 1 0
chr1:156738394|156738585 hsa-miR-6782-5p 1 0 0
chr1:156738394|156738585 hsa-miR-6810-5p 0 1 0
chr1:156738394|156738585 hsa-miR-6786-5p 1 0 0
chr1:156738394|156738585 hsa-miR-6835-5p 0 1 0
chr1:156738394|156738585 hsa-miR-1226-5p 1 0 0
chr1:156738394|156738585 hsa-miR-1229-5p 0 1 0
chr1:156738394|156738585 hsa-miR-4783-3p 1 0 0
chr1:156738394|156738585 hsa-miR-3162-5p 1 0 0
chr1:156738394|156738585 hsa-miR-660-3p 0 1 0
chr1:156738394|156738585 hsa-miR-4661-3p 0 1 0
chr1:156738394|156738585 hsa-miR-6887-3p 0 1 0
chr1:156738394|156738585 hsa-miR-4762-3p 0 1 0
chr1:156738394|156738585 hsa-miR-2114-3p 0 1 0
chr1:156738394|156738585 hsa-miR-509-3p 1 1 0
chr1:156738394|156738585 hsa-miR-6734-3p 0 1 0
chr1:156738394|156738585 hsa-miR-1207-5p 1 1 0
chr1:156738394|156738585 hsa-miR-4763-3p 1 0 0
chr1:156738394|156738585 hsa-miR-6803-5p 0 1 0
chr1:156738394|156738585 hsa-miR-328-5p 1 0 0
chr1:156738394|156738585 hsa-miR-6795-5p 1 1 0
chr1:156738394|156738585 hsa-miR-1185-1-3p 0 1 0
chr1:156738394|156738585 hsa-miR-1185-2-3p 0 1 0
chr1:156738394|156738585 hsa-miR-6783-3p 0 1 0
chr1:156738394|156738585 hsa-miR-433-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:156738394|156738585
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MWEDTKVREGDPCPGGSPSLYPLYEALTVSPQNRYQSSSEMGSTTTGRR
Nucleotide Sequence CTGTGGGAAGATACGAAGGTTAGGGAGGGGGATCCTTGCCCAGGAGGTTCCCCATCACTCTACCCCCTGTATGAGGCTCTCACCGTGTCCCCACAGAACAGATACCAGTCTTCATCAGAGATGGGTTCCACAACCACTGGGCGCCGC

CircID chr1:156738394|156738585
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence MPCFPASLPSRISTCGKIRRLGRGILAQEVPHHSTPCMRLSPCPHRTDTSLHQRWVPQPLGA
Nucleotide Sequence TTGCCCTGCTTCCCGGCATCCTTGCCTTCTAGGATCTCCACCTGTGGGAAGATACGAAGGTTAGGGAGGGGGATCCTTGCCCAGGAGGTTCCCCATCACTCTACCCCCTGTATGAGGCTCTCACCGTGTCCCCACAGAACAGATACCAGTCTTCATCAGAGATGGGTTCCACAACCACTGGGCGCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites