CircRNA Information

General Information
circRNA Basic Information
CircID chr1:156742245|156742508
Strand +
CircType exon
Host Gene ENSG00000143321.17;
Algorism CIRI2;
Sequence CCTTTGTGTGCTCTCCATTCTGCTCCTTCCCCATCGTTGCCCCCATTTCTGAGGTGCACTGGGAGGCTCCCCTTCTATTTGGGGCTTGATGACTTTCTTTTTGTAGCTGGGGCTTTGATGTTCCTTCCAGTGTCATTTCTCATCCACATACCCTGACCTGGCCCCCTCAGTGTTGTCACCAGATCTGATTTGTAACCCACTGAGAGGACAGAGAGAAATAAGTGCCCTCTCCCACCCTCTTCCTACTGGTCTCTCTATGCCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:156742245|156742508 hsa-miR-148a-5p 0 0 1
chr1:156742245|156742508 hsa-miR-148a-3p 0 0 1
chr1:156742245|156742508 hsa-miR-141-5p 0 0 1
chr1:156742245|156742508 hsa-miR-141-3p 0 0 1
chr1:156742245|156742508 hsa-miR-152-5p 0 0 1
chr1:156742245|156742508 hsa-miR-152-3p 0 0 1
chr1:156742245|156742508 hsa-miR-185-5p 0 0 1
chr1:156742245|156742508 hsa-miR-185-3p 0 0 1
chr1:156742245|156742508 hsa-miR-200a-5p 0 0 1
chr1:156742245|156742508 hsa-miR-200a-3p 0 0 1
chr1:156742245|156742508 hsa-miR-148b-5p 0 0 1
chr1:156742245|156742508 hsa-miR-148b-3p 0 0 1
chr1:156742245|156742508 hsa-miR-425-5p 0 0 1
chr1:156742245|156742508 hsa-miR-425-3p 0 0 1
chr1:156742245|156742508 hsa-miR-539-5p 0 0 1
chr1:156742245|156742508 hsa-miR-539-3p 0 0 1
chr1:156742245|156742508 hsa-miR-891a-5p 0 0 1
chr1:156742245|156742508 hsa-miR-891a-3p 0 0 1
chr1:156742245|156742508 hsa-miR-939-5p 0 0 1
chr1:156742245|156742508 hsa-miR-939-3p 0 0 1
chr1:156742245|156742508 hsa-miR-1255a 0 0 1
chr1:156742245|156742508 hsa-miR-1252-5p 0 0 1
chr1:156742245|156742508 hsa-miR-1252-3p 0 0 1
chr1:156742245|156742508 hsa-miR-1825 0 0 1
chr1:156742245|156742508 hsa-miR-1283 0 0 1
chr1:156742245|156742508 hsa-miR-299-3p 0 0 1
chr1:156742245|156742508 hsa-miR-423-5p 0 0 1
chr1:156742245|156742508 hsa-miR-330-3p 0 0 1
chr1:156742245|156742508 hsa-miR-524-5p 0 0 1
chr1:156742245|156742508 hsa-miR-520d-5p 0 0 1
chr1:156742245|156742508 hsa-miR-1255b 0 0 1
chr1:156742245|156742508 hsa-miR-549 0 0 1
chr1:156742245|156742508 hsa-miR-596 1 0 0
chr1:156742245|156742508 hsa-miR-637 1 0 0
chr1:156742245|156742508 hsa-miR-765 1 0 0
chr1:156742245|156742508 hsa-miR-298 1 0 0
chr1:156742245|156742508 hsa-miR-920 1 0 0
chr1:156742245|156742508 hsa-miR-936 1 0 0
chr1:156742245|156742508 hsa-miR-1202 1 0 0
chr1:156742245|156742508 hsa-miR-3154 1 0 0
chr1:156742245|156742508 hsa-miR-3197 1 0 0
chr1:156742245|156742508 hsa-miR-4271 1 0 0
chr1:156742245|156742508 hsa-miR-1268b 1 0 0
chr1:156742245|156742508 hsa-miR-4428 1 0 0
chr1:156742245|156742508 hsa-miR-4468 1 0 0
chr1:156742245|156742508 hsa-miR-4488 1 0 0
chr1:156742245|156742508 hsa-miR-2392 1 0 0
chr1:156742245|156742508 hsa-miR-4507 1 0 0
chr1:156742245|156742508 hsa-miR-4510 1 0 0
chr1:156742245|156742508 hsa-miR-4516 1 0 0
chr1:156742245|156742508 hsa-miR-4533 1 0 0
chr1:156742245|156742508 hsa-miR-4651 1 0 0
chr1:156742245|156742508 hsa-miR-4688 1 0 0
chr1:156742245|156742508 hsa-miR-4739 1 0 0
chr1:156742245|156742508 hsa-miR-5090 1 0 0
chr1:156742245|156742508 hsa-miR-5093 1 0 0
chr1:156742245|156742508 hsa-miR-5698 1 0 0
chr1:156742245|156742508 hsa-miR-6081 1 0 0
chr1:156742245|156742508 hsa-miR-6085 1 0 0
chr1:156742245|156742508 hsa-miR-6086 1 0 0
chr1:156742245|156742508 hsa-miR-6090 1 0 0
chr1:156742245|156742508 hsa-miR-6124 1 0 0
chr1:156742245|156742508 hsa-miR-6127 1 0 0
chr1:156742245|156742508 hsa-miR-6129 1 0 0
chr1:156742245|156742508 hsa-miR-6130 1 0 0
chr1:156742245|156742508 hsa-miR-6133 1 0 0
chr1:156742245|156742508 hsa-miR-6165 1 0 0
chr1:156742245|156742508 hsa-miR-12118 1 0 0
chr1:156742245|156742508 hsa-miR-12120 1 0 0
chr1:156742245|156742508 hsa-miR-12128 1 0 0
chr1:156742245|156742508 hsa-miR-6765-5p 1 0 0
chr1:156742245|156742508 hsa-miR-7106-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6825-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6894-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6804-5p 1 0 0
chr1:156742245|156742508 hsa-miR-5187-5p 1 0 0
chr1:156742245|156742508 hsa-miR-1227-5p 1 0 0
chr1:156742245|156742508 hsa-miR-1225-3p 1 0 0
chr1:156742245|156742508 hsa-miR-6757-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6873-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6880-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4722-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6890-5p 1 0 0
chr1:156742245|156742508 hsa-miR-3928-3p 1 0 0
chr1:156742245|156742508 hsa-miR-6727-5p 1 0 0
chr1:156742245|156742508 hsa-miR-197-5p 1 0 0
chr1:156742245|156742508 hsa-miR-3189-5p 1 0 0
chr1:156742245|156742508 hsa-miR-7845-5p 1 0 0
chr1:156742245|156742508 hsa-miR-3605-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6716-5p 1 0 0
chr1:156742245|156742508 hsa-miR-3180-3p 1 0 0
chr1:156742245|156742508 hsa-miR-6748-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6732-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6798-5p 1 0 0
chr1:156742245|156742508 hsa-miR-486-3p 1 0 0
chr1:156742245|156742508 hsa-miR-6760-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6881-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6782-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6810-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6786-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6835-5p 1 0 0
chr1:156742245|156742508 hsa-miR-1226-5p 1 0 0
chr1:156742245|156742508 hsa-miR-1229-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4640-5p 1 0 0
chr1:156742245|156742508 hsa-miR-885-3p 1 0 0
chr1:156742245|156742508 hsa-miR-3127-5p 1 0 0
chr1:156742245|156742508 hsa-miR-3202 1 0 0
chr1:156742245|156742508 hsa-miR-4787-5p 1 0 0
chr1:156742245|156742508 hsa-miR-149-3p 1 0 0
chr1:156742245|156742508 hsa-miR-3162-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4684-3p 1 0 0
chr1:156742245|156742508 hsa-miR-6826-5p 1 0 0
chr1:156742245|156742508 hsa-miR-7112-3p 1 0 0
chr1:156742245|156742508 hsa-miR-1207-5p 1 0 0
chr1:156742245|156742508 hsa-miR-1233-5p 1 0 0
chr1:156742245|156742508 hsa-miR-1273h-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4763-3p 1 0 0
chr1:156742245|156742508 hsa-miR-6769b-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6778-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6816-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6870-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6775-5p 1 0 0
chr1:156742245|156742508 hsa-miR-1343-5p 1 0 0
chr1:156742245|156742508 hsa-miR-3180 1 0 0
chr1:156742245|156742508 hsa-miR-6743-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6752-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6756-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6803-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6819-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6842-5p 1 0 0
chr1:156742245|156742508 hsa-miR-7110-5p 1 0 0
chr1:156742245|156742508 hsa-miR-1249-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6751-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6763-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6780a-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6797-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6808-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6879-5p 1 0 0
chr1:156742245|156742508 hsa-miR-7111-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4728-5p 1 0 0
chr1:156742245|156742508 hsa-miR-5196-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6780b-5p 1 0 0
chr1:156742245|156742508 hsa-miR-10526-3p 1 0 0
chr1:156742245|156742508 hsa-miR-1237-5p 1 0 0
chr1:156742245|156742508 hsa-miR-328-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4632-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4649-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4725-3p 1 0 0
chr1:156742245|156742508 hsa-miR-6729-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6735-5p 1 0 0
chr1:156742245|156742508 hsa-miR-675-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6795-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6846-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6848-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6858-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6883-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6887-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4723-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6831-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6885-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6511a-5p 1 0 0
chr1:156742245|156742508 hsa-miR-30c-1-3p 1 0 0
chr1:156742245|156742508 hsa-miR-6731-5p 1 0 0
chr1:156742245|156742508 hsa-miR-1914-3p 1 0 0
chr1:156742245|156742508 hsa-miR-4665-5p 1 0 0
chr1:156742245|156742508 hsa-miR-498-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6736-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4646-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6891-5p 1 0 0
chr1:156742245|156742508 hsa-miR-4716-3p 1 0 0
chr1:156742245|156742508 hsa-miR-6750-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6766-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6785-5p 1 0 0
chr1:156742245|156742508 hsa-miR-6829-3p 1 0 0
chr1:156742245|156742508 hsa-miR-5581-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:156742245|156742508
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence MCALHSAPSPSLPPFLRCTGRLPFYLGLDDFLFVAGALMFLPVSFLIHIP
Nucleotide Sequence TTGTGTGCTCTCCATTCTGCTCCTTCCCCATCGTTGCCCCCATTTCTGAGGTGCACTGGGAGGCTCCCCTTCTATTTGGGGCTTGATGACTTTCTTTTTGTAGCTGGGGCTTTGATGTTCCTTCCAGTGTCATTTCTCATCCACATACCCTGA
CircID chr1:156742245|156742508
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MAPSVLSPDLICNPLRGQREISALSHPLPTGLSMP
Nucleotide Sequence CTGGCCCCCTCAGTGTTGTCACCAGATCTGATTTGTAACCCACTGAGAGGACAGAGAGAAATAAGTGCCCTCTCCCACCCTCTTCCTACTGGTCTCTCTATGCCT
CircID chr1:156742245|156742508
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MVTTLRGPGQGMWMRNDTGRNIKAPATKRKSSSPK
Nucleotide Sequence CTGGTGACAACACTGAGGGGGCCAGGTCAGGGTATGTGGATGAGAAATGACACTGGAAGGAACATCAAAGCCCCAGCTACAAAAAGAAAGTCATCAAGCCCCAAATAG
CircID chr1:156742245|156742508
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MTLEGTSKPQLQKESHQAPNRRGASQCTSEMGATMGKEQNGEHTK
Nucleotide Sequence ATGACACTGGAAGGAACATCAAAGCCCCAGCTACAAAAAGAAAGTCATCAAGCCCCAAATAGAAGGGGAGCCTCCCAGTGCACCTCAGAAATGGGGGCAACGATGGGGAAGGAGCAGAATGGAGAGCACACAAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab