CircRNA Information

General Information
circRNA Basic Information
CircID chr1:156743124|156743358
Strand +
CircType exon
Host Gene ENSG00000143321.17;
Algorism CIRI2;
Sequence CCCTTTCCCACCCCAACCTGCTCTCCTCTTCTACTCACTTTTCCCACTCCAAGCCCAGCCCATGGAGATTGACCTGGATGGGGCAGGCCACCTGGCTCTCACCTCTAGGTCCCCATACTCCTATGATCTGAGTCAGAGCCATGTCTTCTCCCTGGAATGAGTTGAGGCCACTGTGTTCCTTCCGCTTGGAGCTATTTTCCAGGCTTCTGCTGGGGCCTGGGACAACTGCTCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:156743124|156743358 hsa-miR-122-5p 0 0 1
chr1:156743124|156743358 hsa-miR-122-3p 0 0 1
chr1:156743124|156743358 hsa-miR-136-5p 0 0 1
chr1:156743124|156743358 hsa-miR-136-3p 0 0 1
chr1:156743124|156743358 hsa-miR-345-5p 0 0 1
chr1:156743124|156743358 hsa-miR-345-3p 0 0 1
chr1:156743124|156743358 hsa-miR-432-5p 0 0 1
chr1:156743124|156743358 hsa-miR-432-3p 0 0 1
chr1:156743124|156743358 hsa-miR-608 1 0 1
chr1:156743124|156743358 hsa-miR-641 0 0 1
chr1:156743124|156743358 hsa-miR-657 0 0 1
chr1:156743124|156743358 hsa-miR-298 0 1 1
chr1:156743124|156743358 hsa-miR-760 1 1 1
chr1:156743124|156743358 hsa-miR-920 0 0 1
chr1:156743124|156743358 hsa-miR-922 0 0 1
chr1:156743124|156743358 hsa-miR-1253 0 0 1
chr1:156743124|156743358 hsa-miR-1252-5p 0 0 1
chr1:156743124|156743358 hsa-miR-1252-3p 0 0 1
chr1:156743124|156743358 hsa-miR-875-3p 0 0 1
chr1:156743124|156743358 hsa-miR-324-3p 0 0 1
chr1:156743124|156743358 hsa-miR-342-5p 0 0 1
chr1:156743124|156743358 hsa-miR-128 0 0 1
chr1:156743124|156743358 hsa-miR-1254 0 0 1
chr1:156743124|156743358 hsa-miR-612 1 0 0
chr1:156743124|156743358 hsa-miR-663a 1 0 0
chr1:156743124|156743358 hsa-miR-658 1 0 0
chr1:156743124|156743358 hsa-miR-762 1 1 0
chr1:156743124|156743358 hsa-miR-765 1 0 0
chr1:156743124|156743358 hsa-miR-663b 1 0 0
chr1:156743124|156743358 hsa-miR-1204 0 1 0
chr1:156743124|156743358 hsa-miR-1268a 1 0 0
chr1:156743124|156743358 hsa-miR-1913 0 1 0
chr1:156743124|156743358 hsa-miR-2278 0 1 0
chr1:156743124|156743358 hsa-miR-2861 1 0 0
chr1:156743124|156743358 hsa-miR-3132 1 1 0
chr1:156743124|156743358 hsa-miR-378b 1 0 0
chr1:156743124|156743358 hsa-miR-3147 1 0 0
chr1:156743124|156743358 hsa-miR-3153 1 1 0
chr1:156743124|156743358 hsa-miR-3154 1 0 0
chr1:156743124|156743358 hsa-miR-3174 1 1 0
chr1:156743124|156743358 hsa-miR-378c 1 1 0
chr1:156743124|156743358 hsa-miR-4271 1 0 0
chr1:156743124|156743358 hsa-miR-4292 1 0 0
chr1:156743124|156743358 hsa-miR-3652 1 0 0
chr1:156743124|156743358 hsa-miR-1268b 1 0 0
chr1:156743124|156743358 hsa-miR-378e 1 0 0
chr1:156743124|156743358 hsa-miR-378f 1 0 0
chr1:156743124|156743358 hsa-miR-378g 1 1 0
chr1:156743124|156743358 hsa-miR-4430 1 0 0
chr1:156743124|156743358 hsa-miR-4434 1 0 0
chr1:156743124|156743358 hsa-miR-4441 0 1 0
chr1:156743124|156743358 hsa-miR-4447 0 1 0
chr1:156743124|156743358 hsa-miR-4476 1 0 0
chr1:156743124|156743358 hsa-miR-4481 1 0 0
chr1:156743124|156743358 hsa-miR-4486 1 0 0
chr1:156743124|156743358 hsa-miR-4492 1 1 0
chr1:156743124|156743358 hsa-miR-4498 1 0 0
chr1:156743124|156743358 hsa-miR-4505 1 1 0
chr1:156743124|156743358 hsa-miR-4507 1 1 0
chr1:156743124|156743358 hsa-miR-4516 1 0 0
chr1:156743124|156743358 hsa-miR-4530 0 1 0
chr1:156743124|156743358 hsa-miR-1587 1 1 0
chr1:156743124|156743358 hsa-miR-4538 1 0 0
chr1:156743124|156743358 hsa-miR-4651 1 1 0
chr1:156743124|156743358 hsa-miR-4654 1 0 0
chr1:156743124|156743358 hsa-miR-4656 1 0 0
chr1:156743124|156743358 hsa-miR-4658 1 0 0
chr1:156743124|156743358 hsa-miR-4675 1 0 0
chr1:156743124|156743358 hsa-miR-4689 1 1 0
chr1:156743124|156743358 hsa-miR-4706 1 0 0
chr1:156743124|156743358 hsa-miR-4710 1 1 0
chr1:156743124|156743358 hsa-miR-4739 1 0 0
chr1:156743124|156743358 hsa-miR-4741 1 0 0
chr1:156743124|156743358 hsa-miR-4748 1 0 0
chr1:156743124|156743358 hsa-miR-4784 1 0 0
chr1:156743124|156743358 hsa-miR-5192 1 0 0
chr1:156743124|156743358 hsa-miR-5572 1 1 0
chr1:156743124|156743358 hsa-miR-5693 0 1 0
chr1:156743124|156743358 hsa-miR-5694 0 1 0
chr1:156743124|156743358 hsa-miR-5695 0 1 0
chr1:156743124|156743358 hsa-miR-5703 1 0 0
chr1:156743124|156743358 hsa-miR-5787 1 0 0
chr1:156743124|156743358 hsa-miR-6081 1 1 0
chr1:156743124|156743358 hsa-miR-6085 1 0 0
chr1:156743124|156743358 hsa-miR-6124 1 1 0
chr1:156743124|156743358 hsa-miR-6125 0 1 0
chr1:156743124|156743358 hsa-miR-6127 1 0 0
chr1:156743124|156743358 hsa-miR-6132 1 0 0
chr1:156743124|156743358 hsa-miR-6165 1 0 0
chr1:156743124|156743358 hsa-miR-6860 1 0 0
chr1:156743124|156743358 hsa-miR-8057 0 1 0
chr1:156743124|156743358 hsa-miR-8080 1 0 0
chr1:156743124|156743358 hsa-miR-12120 1 1 0
chr1:156743124|156743358 hsa-miR-12128 1 0 0
chr1:156743124|156743358 hsa-miR-4433b-3p 1 1 0
chr1:156743124|156743358 hsa-miR-6734-5p 1 0 0
chr1:156743124|156743358 hsa-miR-504-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6747-5p 1 0 0
chr1:156743124|156743358 hsa-miR-3150a-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6861-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6894-5p 1 0 0
chr1:156743124|156743358 hsa-miR-125a-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6510-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6728-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6833-5p 1 0 0
chr1:156743124|156743358 hsa-miR-5187-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6873-5p 1 0 0
chr1:156743124|156743358 hsa-miR-7847-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6746-5p 1 0 0
chr1:156743124|156743358 hsa-miR-4709-3p 1 0 0
chr1:156743124|156743358 hsa-miR-3677-5p 0 1 0
chr1:156743124|156743358 hsa-miR-6730-5p 1 0 0
chr1:156743124|156743358 hsa-miR-7154-3p 1 0 0
chr1:156743124|156743358 hsa-miR-874-5p 0 1 0
chr1:156743124|156743358 hsa-miR-6721-5p 1 0 0
chr1:156743124|156743358 hsa-miR-4655-5p 1 0 0
chr1:156743124|156743358 hsa-miR-197-5p 1 1 0
chr1:156743124|156743358 hsa-miR-3189-5p 0 1 0
chr1:156743124|156743358 hsa-miR-7845-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6742-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6716-5p 1 0 0
chr1:156743124|156743358 hsa-miR-185-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6829-5p 1 0 0
chr1:156743124|156743358 hsa-miR-3190-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6798-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6760-5p 1 1 0
chr1:156743124|156743358 hsa-miR-6881-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6782-5p 1 0 0
chr1:156743124|156743358 hsa-miR-3150b-3p 1 1 0
chr1:156743124|156743358 hsa-miR-6810-5p 0 1 0
chr1:156743124|156743358 hsa-miR-1226-5p 1 0 0
chr1:156743124|156743358 hsa-miR-4763-5p 0 1 0
chr1:156743124|156743358 hsa-miR-1229-5p 1 0 0
chr1:156743124|156743358 hsa-miR-1228-5p 1 0 0
chr1:156743124|156743358 hsa-miR-296-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6771-5p 1 0 0
chr1:156743124|156743358 hsa-miR-877-5p 1 0 0
chr1:156743124|156743358 hsa-miR-4732-5p 1 0 0
chr1:156743124|156743358 hsa-miR-7854-3p 0 1 0
chr1:156743124|156743358 hsa-miR-6878-3p 0 1 0
chr1:156743124|156743358 hsa-miR-4446-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6824-5p 1 0 0
chr1:156743124|156743358 hsa-miR-3162-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6800-5p 0 1 0
chr1:156743124|156743358 hsa-miR-6878-5p 1 1 0
chr1:156743124|156743358 hsa-miR-6869-5p 1 1 0
chr1:156743124|156743358 hsa-miR-7846-3p 1 0 0
chr1:156743124|156743358 hsa-miR-216a-3p 1 1 0
chr1:156743124|156743358 hsa-miR-7113-5p 0 1 0
chr1:156743124|156743358 hsa-miR-4433b-5p 0 1 0
chr1:156743124|156743358 hsa-miR-942-3p 0 1 0
chr1:156743124|156743358 hsa-miR-3144-5p 0 1 0
chr1:156743124|156743358 hsa-miR-1207-5p 1 0 0
chr1:156743124|156743358 hsa-miR-1233-5p 1 1 0
chr1:156743124|156743358 hsa-miR-6778-5p 1 1 0
chr1:156743124|156743358 hsa-miR-6812-5p 1 1 0
chr1:156743124|156743358 hsa-miR-6816-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6893-5p 1 0 0
chr1:156743124|156743358 hsa-miR-1343-5p 1 0 0
chr1:156743124|156743358 hsa-miR-5001-5p 1 1 0
chr1:156743124|156743358 hsa-miR-6737-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6756-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6769a-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6803-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6813-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6819-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6851-5p 1 1 0
chr1:156743124|156743358 hsa-miR-10401-5p 1 0 0
chr1:156743124|156743358 hsa-miR-1249-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6751-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6788-5p 1 1 0
chr1:156743124|156743358 hsa-miR-6797-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6879-5p 1 0 0
chr1:156743124|156743358 hsa-miR-7111-5p 1 0 0
chr1:156743124|156743358 hsa-miR-3620-5p 1 1 0
chr1:156743124|156743358 hsa-miR-5189-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6780b-5p 1 0 0
chr1:156743124|156743358 hsa-miR-10396a-5p 1 0 0
chr1:156743124|156743358 hsa-miR-10396b-5p 1 0 0
chr1:156743124|156743358 hsa-miR-10526-3p 1 0 0
chr1:156743124|156743358 hsa-miR-4632-5p 1 0 0
chr1:156743124|156743358 hsa-miR-4649-5p 1 0 0
chr1:156743124|156743358 hsa-miR-4685-5p 0 1 0
chr1:156743124|156743358 hsa-miR-4745-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6777-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6794-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6846-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6848-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6858-5p 1 0 0
chr1:156743124|156743358 hsa-miR-3187-5p 1 0 0
chr1:156743124|156743358 hsa-miR-4436b-3p 1 0 0
chr1:156743124|156743358 hsa-miR-939-5p 1 0 0
chr1:156743124|156743358 hsa-miR-1238-5p 1 0 0
chr1:156743124|156743358 hsa-miR-4758-5p 1 1 0
chr1:156743124|156743358 hsa-miR-4769-5p 1 0 0
chr1:156743124|156743358 hsa-miR-3198 1 0 0
chr1:156743124|156743358 hsa-miR-3940-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6731-5p 1 1 0
chr1:156743124|156743358 hsa-miR-6856-5p 1 0 0
chr1:156743124|156743358 hsa-miR-1285-3p 1 0 0
chr1:156743124|156743358 hsa-miR-3116 0 1 0
chr1:156743124|156743358 hsa-miR-4747-5p 1 0 0
chr1:156743124|156743358 hsa-miR-6891-5p 1 0 0
chr1:156743124|156743358 hsa-miR-378a-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6849-5p 1 0 0
chr1:156743124|156743358 hsa-miR-10400-3p 1 0 0
chr1:156743124|156743358 hsa-miR-6859-5p 1 0 0
chr1:156743124|156743358 hsa-miR-378d 1 0 0
chr1:156743124|156743358 hsa-miR-3681-3p 0 1 0
chr1:156743124|156743358 hsa-miR-301a-5p 0 1 0
chr1:156743124|156743358 hsa-miR-203b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:156743124|156743358
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MEIDLDGAGHLALTSRSPYSYDLSQSHVFSLE
Nucleotide Sequence ATGGAGATTGACCTGGATGGGGCAGGCCACCTGGCTCTCACCTCTAGGTCCCCATACTCCTATGATCTGAGTCAGAGCCATGTCTTCTCCCTGGAATGA
CircID chr1:156743124|156743358
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MLSSSTHFSHSKPSPWRLTWMGQATWLSPLGPHTPMI
Nucleotide Sequence CTGCTCTCCTCTTCTACTCACTTTTCCCACTCCAAGCCCAGCCCATGGAGATTGACCTGGATGGGGCAGGCCACCTGGCTCTCACCTCTAGGTCCCCATACTCCTATGATCTGA
CircID chr1:156743124|156743358
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MSSPWNELRPLCSFRLELFSRLLLGPGTTAP
Nucleotide Sequence ATGTCTTCTCCCTGGAATGAGTTGAGGCCACTGTGTTCCTTCCGCTTGGAGCTATTTTCCAGGCTTCTGCTGGGGCCTGGGACAACTGCTCCC
CircID chr1:156743124|156743358
ORF Type ORF4
Protein Length 55
Nucleotide Length 168
Protein Sequence MENSSKRKEHSGLNSFQGEDMALTQIIGVWGPRGESQVACPIQVNLHGLGLEWEK
Nucleotide Sequence CTGGAAAATAGCTCCAAGCGGAAGGAACACAGTGGCCTCAACTCATTCCAGGGAGAAGACATGGCTCTGACTCAGATCATAGGAGTATGGGGACCTAGAGGTGAGAGCCAGGTGGCCTGCCCCATCCAGGTCAATCTCCATGGGCTGGGCTTGGAGTGGGAAAAGTGA
CircID chr1:156743124|156743358
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MSQAPAEAWKIAPSGRNTVASTHSREKTWL
Nucleotide Sequence TTGTCCCAGGCCCCAGCAGAAGCCTGGAAAATAGCTCCAAGCGGAAGGAACACAGTGGCCTCAACTCATTCCAGGGAGAAGACATGGCTCTGA
CircID chr1:156743124|156743358
ORF Type ORF6
Protein Length 28
Nucleotide Length 84
Protein Sequence MPHPGQSPWAGLGVGKVSRRGEQVGVGK
Nucleotide Sequence CTGCCCCATCCAGGTCAATCTCCATGGGCTGGGCTTGGAGTGGGAAAAGTGAGTAGAAGAGGAGAGCAGGTTGGGGTGGGAAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab