CircRNA Information

General Information
circRNA Basic Information
CircID chr1:156939683|156939830
Strand -
CircType exon
Host Gene ENSG00000132694.17;
Algorism CIRI2;
Sequence CCATGTCTTCCTGCTCTGGCCGTTCCCCCTCCAGCCCTGCAAGCTGGGTGTTGTCCCCTTCACCCCCAGGGGGTGCTTGCCCTGGGGAGCCTGGGTCCCAGGGGTGAGAGGTGACGCTGATGACAGAAGGTGTGGGTGTCAGGTCGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:156939683|156939830 hsa-miR-484 0 0 1
chr1:156939683|156939830 hsa-miR-625-5p 0 0 1
chr1:156939683|156939830 hsa-miR-625-3p 0 0 1
chr1:156939683|156939830 hsa-miR-637 0 0 1
chr1:156939683|156939830 hsa-miR-641 0 0 1
chr1:156939683|156939830 hsa-miR-1228-5p 0 0 1
chr1:156939683|156939830 hsa-miR-1228-3p 0 0 1
chr1:156939683|156939830 hsa-miR-1229-5p 0 0 1
chr1:156939683|156939830 hsa-miR-1229-3p 0 0 1
chr1:156939683|156939830 hsa-miR-1237-5p 0 0 1
chr1:156939683|156939830 hsa-miR-1237-3p 0 0 1
chr1:156939683|156939830 hsa-miR-1292-5p 0 0 1
chr1:156939683|156939830 hsa-miR-1292-3p 0 0 1
chr1:156939683|156939830 hsa-miR-331-3p 0 1 1
chr1:156939683|156939830 hsa-miR-7 0 0 1
chr1:156939683|156939830 hsa-miR-608 1 1 0
chr1:156939683|156939830 hsa-miR-631 1 0 0
chr1:156939683|156939830 hsa-miR-663a 1 0 0
chr1:156939683|156939830 hsa-miR-762 1 1 0
chr1:156939683|156939830 hsa-miR-711 0 1 0
chr1:156939683|156939830 hsa-miR-3155a 0 1 0
chr1:156939683|156939830 hsa-miR-3178 1 0 0
chr1:156939683|156939830 hsa-miR-4327 1 1 0
chr1:156939683|156939830 hsa-miR-4292 0 1 0
chr1:156939683|156939830 hsa-miR-3652 0 1 0
chr1:156939683|156939830 hsa-miR-3661 1 0 0
chr1:156939683|156939830 hsa-miR-4430 1 1 0
chr1:156939683|156939830 hsa-miR-3135b 0 1 0
chr1:156939683|156939830 hsa-miR-3155b 0 1 0
chr1:156939683|156939830 hsa-miR-4498 1 1 0
chr1:156939683|156939830 hsa-miR-4505 1 0 0
chr1:156939683|156939830 hsa-miR-1587 1 0 0
chr1:156939683|156939830 hsa-miR-4651 1 0 0
chr1:156939683|156939830 hsa-miR-4656 1 0 0
chr1:156939683|156939830 hsa-miR-4739 1 0 0
chr1:156939683|156939830 hsa-miR-4741 1 0 0
chr1:156939683|156939830 hsa-miR-5698 1 0 0
chr1:156939683|156939830 hsa-miR-5787 1 0 0
chr1:156939683|156939830 hsa-miR-6085 1 0 0
chr1:156939683|156939830 hsa-miR-6090 1 0 0
chr1:156939683|156939830 hsa-miR-6132 1 1 0
chr1:156939683|156939830 hsa-miR-8089 1 0 0
chr1:156939683|156939830 hsa-miR-12125 0 1 0
chr1:156939683|156939830 hsa-miR-4435 1 0 0
chr1:156939683|156939830 hsa-miR-4726-3p 1 1 0
chr1:156939683|156939830 hsa-miR-6515-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4722-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4755-3p 0 1 0
chr1:156939683|156939830 hsa-miR-3180-3p 1 0 0
chr1:156939683|156939830 hsa-miR-6868-3p 0 1 0
chr1:156939683|156939830 hsa-miR-6732-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6805-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6798-5p 1 0 0
chr1:156939683|156939830 hsa-miR-486-3p 1 0 0
chr1:156939683|156939830 hsa-miR-6782-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6765-3p 1 0 0
chr1:156939683|156939830 hsa-miR-1343-3p 0 1 0
chr1:156939683|156939830 hsa-miR-6852-5p 0 1 0
chr1:156939683|156939830 hsa-miR-5088-5p 1 0 0
chr1:156939683|156939830 hsa-miR-7109-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4793-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6823-5p 1 1 0
chr1:156939683|156939830 hsa-miR-6749-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4787-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4446-3p 1 1 0
chr1:156939683|156939830 hsa-miR-6781-5p 1 0 0
chr1:156939683|156939830 hsa-miR-5010-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6864-5p 0 1 0
chr1:156939683|156939830 hsa-miR-3189-3p 0 1 0
chr1:156939683|156939830 hsa-miR-3191-3p 1 0 0
chr1:156939683|156939830 hsa-miR-6730-3p 1 1 0
chr1:156939683|156939830 hsa-miR-744-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6801-5p 0 1 0
chr1:156939683|156939830 hsa-miR-6871-3p 0 1 0
chr1:156939683|156939830 hsa-miR-6859-3p 1 0 0
chr1:156939683|156939830 hsa-miR-4649-3p 1 0 0
chr1:156939683|156939830 hsa-miR-6802-3p 0 1 0
chr1:156939683|156939830 hsa-miR-5003-5p 0 1 0
chr1:156939683|156939830 hsa-miR-1233-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4763-3p 1 0 0
chr1:156939683|156939830 hsa-miR-6787-5p 1 0 0
chr1:156939683|156939830 hsa-miR-1343-5p 1 0 0
chr1:156939683|156939830 hsa-miR-3180 1 0 0
chr1:156939683|156939830 hsa-miR-5001-5p 1 1 0
chr1:156939683|156939830 hsa-miR-6756-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6803-5p 1 1 0
chr1:156939683|156939830 hsa-miR-6819-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6851-5p 1 0 0
chr1:156939683|156939830 hsa-miR-7110-5p 0 1 0
chr1:156939683|156939830 hsa-miR-11181-3p 1 0 0
chr1:156939683|156939830 hsa-miR-1249-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6722-3p 1 0 0
chr1:156939683|156939830 hsa-miR-6751-5p 0 1 0
chr1:156939683|156939830 hsa-miR-6780a-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6797-5p 1 0 0
chr1:156939683|156939830 hsa-miR-7111-5p 1 0 0
chr1:156939683|156939830 hsa-miR-1915-3p 0 1 0
chr1:156939683|156939830 hsa-miR-3620-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4728-5p 1 0 0
chr1:156939683|156939830 hsa-miR-5196-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6780b-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6836-5p 1 0 0
chr1:156939683|156939830 hsa-miR-10396a-5p 1 0 0
chr1:156939683|156939830 hsa-miR-10396b-5p 1 0 0
chr1:156939683|156939830 hsa-miR-328-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4685-5p 1 1 0
chr1:156939683|156939830 hsa-miR-4725-3p 1 0 0
chr1:156939683|156939830 hsa-miR-4726-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4749-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6794-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6795-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6846-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6848-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6887-5p 1 1 0
chr1:156939683|156939830 hsa-miR-4436b-3p 0 1 0
chr1:156939683|156939830 hsa-miR-4697-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4723-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6845-5p 1 0 0
chr1:156939683|156939830 hsa-miR-6885-5p 1 0 0
chr1:156939683|156939830 hsa-miR-939-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4758-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4665-5p 1 0 0
chr1:156939683|156939830 hsa-miR-4716-3p 1 0 0
chr1:156939683|156939830 hsa-miR-6791-5p 1 1 0
chr1:156939683|156939830 hsa-miR-6837-5p 0 1 0
chr1:156939683|156939830 hsa-miR-3622a-3p 1 1 0
chr1:156939683|156939830 hsa-miR-1234-3p 1 1 0
chr1:156939683|156939830 hsa-miR-498-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:156939683|156939830
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MAVPPPALQAGCCPLHPQGVLALGSLGPRGER
Nucleotide Sequence CTGGCCGTTCCCCCTCCAGCCCTGCAAGCTGGGTGTTGTCCCCTTCACCCCCAGGGGGTGCTTGCCCTGGGGAGCCTGGGTCCCAGGGGTGAGAGGTGA
CircID chr1:156939683|156939830
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MLWPFPLQPCKLGVVPFTPRGCLPWGAWVPGVRGDADDRRCGCQVV
Nucleotide Sequence CTGCTCTGGCCGTTCCCCCTCCAGCCCTGCAAGCTGGGTGTTGTCCCCTTCACCCCCAGGGGGTGCTTGCCCTGGGGAGCCTGGGTCCCAGGGGTGAGAGGTGACGCTGATGACAGAAGGTGTGGGTGTCAGGTCGTC
CircID chr1:156939683|156939830
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MSSCSGRSPSSPASWVLSPSPPGGACPGEPGSQG
Nucleotide Sequence ATGTCTTCCTGCTCTGGCCGTTCCCCCTCCAGCCCTGCAAGCTGGGTGTTGTCCCCTTCACCCCCAGGGGGTGCTTGCCCTGGGGAGCCTGGGTCCCAGGGGTGA
CircID chr1:156939683|156939830
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MTPTPSVISVTSHPWDPGSPGQAPPGGEGDNTQLAGLEGERPEQEDM
Nucleotide Sequence CTGACACCCACACCTTCTGTCATCAGCGTCACCTCTCACCCCTGGGACCCAGGCTCCCCAGGGCAAGCACCCCCTGGGGGTGAAGGGGACAACACCCAGCTTGCAGGGCTGGAGGGGGAACGGCCAGAGCAGGAAGACATG
CircID chr1:156939683|156939830
ORF Type ORF5
Protein Length 42
Nucleotide Length 126
Protein Sequence MSSASPLTPGTQAPQGKHPLGVKGTTPSLQGWRGNGQSRKTW
Nucleotide Sequence CTGTCATCAGCGTCACCTCTCACCCCTGGGACCCAGGCTCCCCAGGGCAAGCACCCCCTGGGGGTGAAGGGGACAACACCCAGCTTGCAGGGCTGGAGGGGGAACGGCCAGAGCAGGAAGACATGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab