CircNet

General Information

circRNA Basic Information

CircID	chr1:15785180\|15785321
Strand	-
CircType	exon
Host Gene	ENSG00000162458.11;
Algorism	CIRI2;
Sequence	AAAAATTAGCCAGGCATGGTAGCAGGTGCCTGTAATCCCAGCTACTGGGGAAAGCTGAGGCAGGAGAATTGCTTCAATCTGGAAGGCAGAGGTTGCAGTGAGATTGCACCATTGCATTCCAGCCTGGGCAACAAGAGGGAAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:15785180\|15785321	hsa-miR-216a-5p	0	0	1
chr1:15785180\|15785321	hsa-miR-216a-3p	0	0	1
chr1:15785180\|15785321	hsa-miR-206	0	0	1
chr1:15785180\|15785321	hsa-miR-613	0	0	1
chr1:15785180\|15785321	hsa-miR-661	0	0	1
chr1:15785180\|15785321	hsa-miR-127-5p	0	0	1
chr1:15785180\|15785321	hsa-miR-525-5p	0	0	1
chr1:15785180\|15785321	hsa-miR-520a-5p	0	0	1
chr1:15785180\|15785321	hsa-miR-590-3p	0	0	1
chr1:15785180\|15785321	hsa-miR-642	0	0	1
chr1:15785180\|15785321	hsa-miR-1	0	0	1
chr1:15785180\|15785321	hsa-miR-1254	0	0	1
chr1:15785180\|15785321	hsa-miR-1976	0	1	0
chr1:15785180\|15785321	hsa-miR-3135a	0	1	0
chr1:15785180\|15785321	hsa-miR-4269	0	1	0
chr1:15785180\|15785321	hsa-miR-4430	0	1	0
chr1:15785180\|15785321	hsa-miR-4654	0	1	0
chr1:15785180\|15785321	hsa-miR-143-5p	0	1	0
chr1:15785180\|15785321	hsa-miR-6868-3p	0	1	0
chr1:15785180\|15785321	hsa-miR-4633-5p	0	1	0
chr1:15785180\|15785321	hsa-miR-5001-3p	0	1	0
chr1:15785180\|15785321	hsa-miR-1304-3p	1	1	0
chr1:15785180\|15785321	hsa-miR-4695-3p	0	1	0
chr1:15785180\|15785321	hsa-miR-4772-3p	0	1	0
chr1:15785180\|15785321	hsa-miR-6837-3p	1	0	0
chr1:15785180\|15785321	hsa-miR-3622a-3p	1	0	0
chr1:15785180\|15785321	hsa-miR-5581-5p	0	1	0
chr1:15785180\|15785321	hsa-miR-619-5p	1	1	0
chr1:15785180\|15785321	hsa-miR-3622b-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:15785180\|15785321
ORF Type	ORF1
Protein Length	42
Nucleotide Length	126
Protein Sequence	MVAGACNPSYWGKLRQENCFNLEGRGCSEIAPLHSSLGNKRE
Nucleotide Sequence	ATGGTAGCAGGTGCCTGTAATCCCAGCTACTGGGGAAAGCTGAGGCAGGAGAATTGCTTCAATCTGGAAGGCAGAGGTTGCAGTGAGATTGCACCATTGCATTCCAGCCTGGGCAACAAGAGGGAA

CircID	chr1:15785180\|15785321
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MQWCNLTATSAFQIEAILLPQLSPVAGITGTCYHAWLIF
Nucleotide Sequence	ATGCAATGGTGCAATCTCACTGCAACCTCTGCCTTCCAGATTGAAGCAATTCTCCTGCCTCAGCTTTCCCCAGTAGCTGGGATTACAGGCACCTGCTACCATGCCTGGCTAATTTTT

CircID	chr1:15785180\|15785321
ORF Type	ORF3
Protein Length	30
Nucleotide Length	93
Protein Sequence	MLPRLECNGAISLQPLPSRLKQFSCLSFPQ
Nucleotide Sequence	TTGTTGCCCAGGCTGGAATGCAATGGTGCAATCTCACTGCAACCTCTGCCTTCCAGATTGAAGCAATTCTCCTGCCTCAGCTTTCCCCAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information