CircNet

General Information

circRNA Basic Information

CircID	chr1:15939675\|15939906
Strand	-
CircType	exon
Host Gene	ENSG00000065526.9;
Algorism	CIRI2;
Sequence	CGGGGCTGGGTTTCTCTTTCCTCTTTTTGGAGAAAAGGAACAGGGCAGTGGAATGAAAATTTTTTGTTTGTTTGTTTTTAAGAAACAAGAAAACAGAACTGCCTTTGCACTAAATTAGTGACTTGGACTTTTGCCCAGTGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTGCTGAGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:15939675\|15939906	hsa-miR-19a-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-19a-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-214-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-214-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-224-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-224-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-130a-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-130a-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-301a-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-301a-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-130b-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-130b-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-412-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-412-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-495-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-495-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-527	0	0	1
chr1:15939675\|15939906	hsa-miR-573	0	0	1
chr1:15939675\|15939906	hsa-miR-578	0	0	1
chr1:15939675\|15939906	hsa-miR-583	0	1	1
chr1:15939675\|15939906	hsa-miR-597-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-597-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-603	0	0	1
chr1:15939675\|15939906	hsa-miR-612	0	1	1
chr1:15939675\|15939906	hsa-miR-641	0	1	1
chr1:15939675\|15939906	hsa-miR-454-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-454-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-1298-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-1298-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-298	1	1	1
chr1:15939675\|15939906	hsa-miR-874-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-874-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-301b-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-301b-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-922	0	0	1
chr1:15939675\|15939906	hsa-miR-934	0	0	1
chr1:15939675\|15939906	hsa-miR-146b-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-525-5p	0	1	1
chr1:15939675\|15939906	hsa-miR-520a-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-518a-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-515-5p	0	0	1
chr1:15939675\|15939906	hsa-miR-362-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-548d-3p	0	0	1
chr1:15939675\|15939906	hsa-miR-1274b	0	0	1
chr1:15939675\|15939906	hsa-miR-1285	0	0	1
chr1:15939675\|15939906	hsa-miR-19b	0	0	1
chr1:15939675\|15939906	hsa-miR-329	0	0	1
chr1:15939675\|15939906	hsa-miR-1248	0	1	0
chr1:15939675\|15939906	hsa-miR-3193	0	1	0
chr1:15939675\|15939906	hsa-miR-3916	0	1	0
chr1:15939675\|15939906	hsa-miR-3941	0	1	0
chr1:15939675\|15939906	hsa-miR-18a-3p	0	1	0
chr1:15939675\|15939906	hsa-miR-3667-3p	0	1	0
chr1:15939675\|15939906	hsa-miR-1266-3p	0	1	0
chr1:15939675\|15939906	hsa-miR-335-3p	0	1	0
chr1:15939675\|15939906	hsa-miR-6509-3p	0	1	0
chr1:15939675\|15939906	hsa-miR-6735-5p	1	0	0
chr1:15939675\|15939906	hsa-miR-1285-3p	0	1	0
chr1:15939675\|15939906	hsa-miR-324-3p	0	1	0
chr1:15939675\|15939906	hsa-miR-6876-5p	0	1	0
chr1:15939675\|15939906	hsa-miR-6859-5p	0	1	0
chr1:15939675\|15939906	hsa-miR-5699-3p	0	1	0
chr1:15939675\|15939906	hsa-miR-6874-3p	0	1	0
chr1:15939675\|15939906	hsa-miR-6733-5p	0	1	0
chr1:15939675\|15939906	hsa-miR-519e-5p	0	1	0
chr1:15939675\|15939906	hsa-miR-6507-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:15939675\|15939906
ORF Type	ORF1
Protein Length	36
Nucleotide Length	108
Protein Sequence	MDFCPVKTGCDTLDVLVCVDTHCRLLTQEGLQTSAE
Nucleotide Sequence	TTGGACTTTTGCCCAGTGAAGACAGGCTGTGACACTCTGGATGTCTTGGTGTGTGTAGACACACATTGCAGACTCTTAACGCAGGAAGGACTTCAAACTTCTGCTGAG

CircID	chr1:15939675\|15939906
ORF Type	ORF2
Protein Length	27
Nucleotide Length	84
Protein Sequence	MQCVSTHTKTSRVSQPVFTGQKSKSLI
Nucleotide Sequence	CTGCAATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACTGGGCAAAAGTCCAAGTCACTAATTTAG

CircID	chr1:15939675\|15939906
ORF Type	ORF3
Protein Length	29
Nucleotide Length	87
Protein Sequence	MFLKNKQTKNFHSTALFLFSKKRKEKPSP
Nucleotide Sequence	TTGTTTCTTAAAAACAAACAAACAAAAAATTTTCATTCCACTGCCCTGTTCCTTTTCTCCAAAAAGAGGAAAGAGAAACCCAGCCCC

CircID	chr1:15939675\|15939906
ORF Type	ORF4
Protein Length	32
Nucleotide Length	96
Protein Sequence	MFSCFLKTNKQKIFIPLPCSFSPKRGKRNPAP
Nucleotide Sequence	CTGTTTTCTTGTTTCTTAAAAACAAACAAACAAAAAATTTTCATTCCACTGCCCTGTTCCTTTTCTCCAAAAAGAGGAAAGAGAAACCCAGCCCCG

CircID	chr1:15939675\|15939906
ORF Type	ORF5
Protein Length	36
Nucleotide Length	111
Protein Sequence	MCVYTHQDIQSVTACLHWAKVQVTNLVQRQFCFLVS
Nucleotide Sequence	ATGTGTGTCTACACACACCAAGACATCCAGAGTGTCACAGCCTGTCTTCACTGGGCAAAAGTCCAAGTCACTAATTTAGTGCAAAGGCAGTTCTGTTTTCTTGTTTCTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information