CircRNA Information

General Information
circRNA Basic Information
CircID chr1:15942380|15942642
Strand -
CircType exon
Host Gene ENSG00000116809.10;
Algorism CIRI2;
Sequence TTCCGTCTCATCGGCTGTCACTGCAGCTCCCACCGGCACCACTGCGGGCAGAGTCGCAGGGCCTAAGGTGAAGGCACGGGCACTGCCCCATCATCGCCACCCTGGCAGCAAGCTGCCTGTGACTTCCCTCTGCTGCCCACAGCCCGCACCTGTGAGCTGAGTGACGGCTGTCGCTGCCAGTGCCTCGGTAGCCAGCGTGACCATGTCATCCACAGTGACCACGCTGACCTCACTGCCCTCCTCGGGCTCCAGGATCTTGATGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:15942380|15942642 hsa-miR-34a-5p 0 0 1
chr1:15942380|15942642 hsa-miR-34a-3p 0 0 1
chr1:15942380|15942642 hsa-miR-224-5p 0 0 1
chr1:15942380|15942642 hsa-miR-224-3p 0 0 1
chr1:15942380|15942642 hsa-miR-449a 0 1 1
chr1:15942380|15942642 hsa-miR-412-5p 0 0 1
chr1:15942380|15942642 hsa-miR-412-3p 0 0 1
chr1:15942380|15942642 hsa-miR-552-5p 0 0 1
chr1:15942380|15942642 hsa-miR-552-3p 0 0 1
chr1:15942380|15942642 hsa-miR-558 0 0 1
chr1:15942380|15942642 hsa-miR-449b-5p 0 0 1
chr1:15942380|15942642 hsa-miR-449b-3p 0 0 1
chr1:15942380|15942642 hsa-miR-668-5p 0 0 1
chr1:15942380|15942642 hsa-miR-668-3p 0 0 1
chr1:15942380|15942642 hsa-miR-675-5p 0 0 1
chr1:15942380|15942642 hsa-miR-675-3p 0 0 1
chr1:15942380|15942642 hsa-miR-920 1 1 1
chr1:15942380|15942642 hsa-miR-922 0 0 1
chr1:15942380|15942642 hsa-miR-1208 0 0 1
chr1:15942380|15942642 hsa-miR-1291 0 0 1
chr1:15942380|15942642 hsa-miR-1294 0 1 1
chr1:15942380|15942642 hsa-miR-1255a 0 0 1
chr1:15942380|15942642 hsa-miR-512-5p 0 0 1
chr1:15942380|15942642 hsa-miR-139-3p 0 0 1
chr1:15942380|15942642 hsa-miR-486-3p 0 0 1
chr1:15942380|15942642 hsa-miR-885-3p 0 1 1
chr1:15942380|15942642 hsa-miR-513a-5p 0 0 1
chr1:15942380|15942642 hsa-miR-324-3p 0 0 1
chr1:15942380|15942642 hsa-miR-34c-5p 0 1 1
chr1:15942380|15942642 hsa-miR-542-3p 0 0 1
chr1:15942380|15942642 hsa-miR-151-5p 0 0 1
chr1:15942380|15942642 hsa-miR-1255b 0 0 1
chr1:15942380|15942642 hsa-miR-220c 0 0 1
chr1:15942380|15942642 hsa-miR-1295 0 0 1
chr1:15942380|15942642 hsa-miR-608 1 1 0
chr1:15942380|15942642 hsa-miR-658 1 1 0
chr1:15942380|15942642 hsa-miR-936 1 1 0
chr1:15942380|15942642 hsa-miR-3137 1 0 0
chr1:15942380|15942642 hsa-miR-4300 0 1 0
chr1:15942380|15942642 hsa-miR-4318 0 1 0
chr1:15942380|15942642 hsa-miR-4322 0 1 0
chr1:15942380|15942642 hsa-miR-3621 1 0 0
chr1:15942380|15942642 hsa-miR-3665 1 0 0
chr1:15942380|15942642 hsa-miR-3135b 1 0 0
chr1:15942380|15942642 hsa-miR-4466 1 1 0
chr1:15942380|15942642 hsa-miR-4522 1 1 0
chr1:15942380|15942642 hsa-miR-4656 1 0 0
chr1:15942380|15942642 hsa-miR-4692 0 1 0
chr1:15942380|15942642 hsa-miR-4734 0 1 0
chr1:15942380|15942642 hsa-miR-4741 1 1 0
chr1:15942380|15942642 hsa-miR-4752 0 1 0
chr1:15942380|15942642 hsa-miR-5190 0 1 0
chr1:15942380|15942642 hsa-miR-6068 1 0 0
chr1:15942380|15942642 hsa-miR-6081 1 0 0
chr1:15942380|15942642 hsa-miR-8089 1 0 0
chr1:15942380|15942642 hsa-miR-12115 1 0 0
chr1:15942380|15942642 hsa-miR-134-3p 0 1 0
chr1:15942380|15942642 hsa-miR-17-3p 0 1 0
chr1:15942380|15942642 hsa-miR-6825-5p 1 1 0
chr1:15942380|15942642 hsa-miR-7114-5p 0 1 0
chr1:15942380|15942642 hsa-miR-6873-5p 0 1 0
chr1:15942380|15942642 hsa-miR-6744-5p 0 1 0
chr1:15942380|15942642 hsa-miR-6741-5p 1 0 0
chr1:15942380|15942642 hsa-miR-3180-3p 1 0 0
chr1:15942380|15942642 hsa-miR-5006-5p 1 1 0
chr1:15942380|15942642 hsa-miR-1343-3p 1 0 0
chr1:15942380|15942642 hsa-miR-6786-5p 1 1 0
chr1:15942380|15942642 hsa-miR-1909-5p 0 1 0
chr1:15942380|15942642 hsa-miR-3944-3p 1 0 0
chr1:15942380|15942642 hsa-miR-3691-5p 0 1 0
chr1:15942380|15942642 hsa-miR-6516-5p 0 1 0
chr1:15942380|15942642 hsa-miR-6501-5p 1 0 0
chr1:15942380|15942642 hsa-miR-4787-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6717-5p 0 1 0
chr1:15942380|15942642 hsa-miR-2277-5p 1 0 0
chr1:15942380|15942642 hsa-miR-3173-5p 0 1 0
chr1:15942380|15942642 hsa-miR-196b-3p 0 1 0
chr1:15942380|15942642 hsa-miR-10400-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6778-5p 0 1 0
chr1:15942380|15942642 hsa-miR-6816-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6726-5p 1 1 0
chr1:15942380|15942642 hsa-miR-6756-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6803-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6722-3p 1 0 0
chr1:15942380|15942642 hsa-miR-6751-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6780a-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6879-5p 0 1 0
chr1:15942380|15942642 hsa-miR-6754-3p 0 1 0
chr1:15942380|15942642 hsa-miR-328-5p 1 0 0
chr1:15942380|15942642 hsa-miR-449c-5p 0 1 0
chr1:15942380|15942642 hsa-miR-4632-5p 1 1 0
chr1:15942380|15942642 hsa-miR-4685-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6735-5p 0 1 0
chr1:15942380|15942642 hsa-miR-6777-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6846-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6848-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6799-3p 0 1 0
chr1:15942380|15942642 hsa-miR-7843-5p 0 1 0
chr1:15942380|15942642 hsa-miR-6724-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6791-5p 1 0 0
chr1:15942380|15942642 hsa-miR-6775-3p 1 1 0
chr1:15942380|15942642 hsa-miR-2682-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:15942380|15942642
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MLPTARTCELSDGCRCQCLGSQRDHVIHSDHADLTALLGLQDLD
Nucleotide Sequence CTGCTGCCCACAGCCCGCACCTGTGAGCTGAGTGACGGCTGTCGCTGCCAGTGCCTCGGTAGCCAGCGTGACCATGTCATCCACAGTGACCACGCTGACCTCACTGCCCTCCTCGGGCTCCAGGATCTTGAT

CircID chr1:15942380|15942642
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MPHHRHPGSKLPVTSLCCPQPAPVS
Nucleotide Sequence CTGCCCCATCATCGCCACCCTGGCAGCAAGCTGCCTGTGACTTCCCTCTGCTGCCCACAGCCCGCACCTGTGAGCTGA

CircID chr1:15942380|15942642
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MWMTWSRWLPRHWQRQPSLSSQVRAVGSRGKSQAACCQGGDDGAVPVPSP
Nucleotide Sequence CTGTGGATGACATGGTCACGCTGGCTACCGAGGCACTGGCAGCGACAGCCGTCACTCAGCTCACAGGTGCGGGCTGTGGGCAGCAGAGGGAAGTCACAGGCAGCTTGCTGCCAGGGTGGCGATGATGGGGCAGTGCCCGTGCCTTCACCTTAG

CircID chr1:15942380|15942642
ORF Type ORF4
Protein Length 44
Nucleotide Length 135
Protein Sequence MWAAEGSHRQLAARVAMMGQCPCLHLRPCDSARSGAGGSCSDSR
Nucleotide Sequence CTGTGGGCAGCAGAGGGAAGTCACAGGCAGCTTGCTGCCAGGGTGGCGATGATGGGGCAGTGCCCGTGCCTTCACCTTAGGCCCTGCGACTCTGCCCGCAGTGGTGCCGGTGGGAGCTGCAGTGACAGCCGATGA

CircID chr1:15942380|15942642
ORF Type ORF5
Protein Length 53
Nucleotide Length 162
Protein Sequence MEPEEGSEVSVVTVDDMVTLATEALAATAVTQLTGAGCGQQREVTGSLLPGWR
Nucleotide Sequence CTGGAGCCCGAGGAGGGCAGTGAGGTCAGCGTGGTCACTGTGGATGACATGGTCACGCTGGCTACCGAGGCACTGGCAGCGACAGCCGTCACTCAGCTCACAGGTGCGGGCTGTGGGCAGCAGAGGGAAGTCACAGGCAGCTTGCTGCCAGGGTGGCGATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites