CircRNA Information

General Information
circRNA Basic Information
CircID chr1:159713367|159713498
Strand +
CircType exon
Host Gene ENSG00000132693.11;
Algorism CIRI2;
Sequence CTCCCGGTTTTTTACACCGCATGGGCCCCACGTCTCTGTCTCTGGTACCTCCCGCTTTTTTACACTGCATGGTTCCCACGTCTCTGTCTCTGGGCCTTTGTTCCCCTATATGCATTGCAGGCCTGCTCCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:159713367|159713498 hsa-miR-448 0 0 1
chr1:159713367|159713498 hsa-miR-1292-5p 0 0 1
chr1:159713367|159713498 hsa-miR-1292-3p 0 0 1
chr1:159713367|159713498 hsa-miR-548d-3p 0 0 1
chr1:159713367|159713498 hsa-miR-658 1 0 0
chr1:159713367|159713498 hsa-miR-1303 1 0 0
chr1:159713367|159713498 hsa-miR-711 1 0 0
chr1:159713367|159713498 hsa-miR-4298 1 0 0
chr1:159713367|159713498 hsa-miR-4327 1 0 0
chr1:159713367|159713498 hsa-miR-4281 1 0 0
chr1:159713367|159713498 hsa-miR-4428 1 0 0
chr1:159713367|159713498 hsa-miR-4466 1 0 0
chr1:159713367|159713498 hsa-miR-3689c 1 0 0
chr1:159713367|159713498 hsa-miR-4484 1 0 0
chr1:159713367|159713498 hsa-miR-4688 1 0 0
chr1:159713367|159713498 hsa-miR-4692 1 0 0
chr1:159713367|159713498 hsa-miR-4706 1 0 0
chr1:159713367|159713498 hsa-miR-5090 1 0 0
chr1:159713367|159713498 hsa-miR-5091 1 1 0
chr1:159713367|159713498 hsa-miR-6081 1 1 0
chr1:159713367|159713498 hsa-miR-6165 1 0 0
chr1:159713367|159713498 hsa-miR-6863 0 1 0
chr1:159713367|159713498 hsa-miR-8059 1 0 0
chr1:159713367|159713498 hsa-miR-8089 1 0 0
chr1:159713367|159713498 hsa-miR-211-3p 0 1 0
chr1:159713367|159713498 hsa-miR-7106-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6825-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6799-5p 1 1 0
chr1:159713367|159713498 hsa-miR-139-3p 1 0 0
chr1:159713367|159713498 hsa-miR-1227-5p 1 1 0
chr1:159713367|159713498 hsa-miR-6880-5p 0 1 0
chr1:159713367|159713498 hsa-miR-6746-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6820-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6806-5p 1 0 0
chr1:159713367|159713498 hsa-miR-7845-5p 1 1 0
chr1:159713367|159713498 hsa-miR-6783-5p 0 1 0
chr1:159713367|159713498 hsa-miR-3190-3p 1 0 0
chr1:159713367|159713498 hsa-miR-6827-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6798-5p 1 0 0
chr1:159713367|159713498 hsa-miR-2467-3p 1 0 0
chr1:159713367|159713498 hsa-miR-5008-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6853-5p 1 1 0
chr1:159713367|159713498 hsa-miR-6753-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6771-5p 1 0 0
chr1:159713367|159713498 hsa-miR-92b-5p 1 0 0
chr1:159713367|159713498 hsa-miR-4713-3p 1 0 0
chr1:159713367|159713498 hsa-miR-6749-5p 1 0 0
chr1:159713367|159713498 hsa-miR-149-3p 1 0 0
chr1:159713367|159713498 hsa-miR-6824-5p 1 1 0
chr1:159713367|159713498 hsa-miR-6789-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6781-5p 1 0 0
chr1:159713367|159713498 hsa-miR-7112-5p 1 0 0
chr1:159713367|159713498 hsa-miR-7113-5p 0 1 0
chr1:159713367|159713498 hsa-miR-483-5p 1 0 0
chr1:159713367|159713498 hsa-miR-1233-5p 1 0 0
chr1:159713367|159713498 hsa-miR-3689b-3p 1 0 0
chr1:159713367|159713498 hsa-miR-6778-5p 1 1 0
chr1:159713367|159713498 hsa-miR-6865-5p 1 0 0
chr1:159713367|159713498 hsa-miR-1343-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6743-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6851-5p 1 0 0
chr1:159713367|159713498 hsa-miR-1249-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6779-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6808-5p 0 1 0
chr1:159713367|159713498 hsa-miR-7111-5p 1 0 0
chr1:159713367|159713498 hsa-miR-4728-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6780b-5p 1 0 0
chr1:159713367|159713498 hsa-miR-328-5p 1 0 0
chr1:159713367|159713498 hsa-miR-3689a-3p 1 0 0
chr1:159713367|159713498 hsa-miR-449c-5p 1 0 0
chr1:159713367|159713498 hsa-miR-4725-3p 1 0 0
chr1:159713367|159713498 hsa-miR-4726-5p 1 0 0
chr1:159713367|159713498 hsa-miR-4745-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6738-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6777-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6795-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6887-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6889-5p 1 0 0
chr1:159713367|159713498 hsa-miR-4723-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6845-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6885-5p 1 0 0
chr1:159713367|159713498 hsa-miR-939-5p 1 1 0
chr1:159713367|159713498 hsa-miR-6511a-5p 1 0 0
chr1:159713367|159713498 hsa-miR-3085-5p 1 0 0
chr1:159713367|159713498 hsa-miR-1914-3p 1 0 0
chr1:159713367|159713498 hsa-miR-10398-3p 1 0 0
chr1:159713367|159713498 hsa-miR-6785-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6859-5p 1 0 0
chr1:159713367|159713498 hsa-miR-3619-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6811-5p 1 0 0
chr1:159713367|159713498 hsa-miR-6503-5p 1 0 0
chr1:159713367|159713498 hsa-miR-1912-3p 1 0 0
chr1:159713367|159713498 hsa-miR-6506-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:159713367|159713498
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MGPTSLSLVPPAFLHCMVPTSLSLGLCSPICIAGLLH
Nucleotide Sequence ATGGGCCCCACGTCTCTGTCTCTGGTACCTCCCGCTTTTTTACACTGCATGGTTCCCACGTCTCTGTCTCTGGGCCTTTGTTCCCCTATATGCATTGCAGGCCTGCTCCAC
CircID chr1:159713367|159713498
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MHIGEQRPRDRDVGTMQCKKAGGTRDRDVGPMRCKKPG
Nucleotide Sequence ATGCATATAGGGGAACAAAGGCCCAGAGACAGAGACGTGGGAACCATGCAGTGTAAAAAAGCGGGAGGTACCAGAGACAGAGACGTGGGGCCCATGCGGTGTAAAAAACCGGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab