CircRNA Information

General Information
circRNA Basic Information
CircID chr1:159918204|159918596
Strand -
CircType exon
Host Gene ENSG00000158710.13;
Algorism CIRI2;
Sequence CCCACCCCTTAGCCACAGTGAAGGGAATGGAAAATGAGAAGCCACGAGGGCCCCTGCCAGGGAAGGCTGCCCCAGATGTGTGGTGAGCACAGTCAGTGCAGCTGTGGCTGGGGCAGCAGCTGCCACAGGCTCCTCCCTATAAATTAAGTTCCTGCAGCCACAGCTGTGGGAGAAGCATACTTGTAGAAGCAAGGCCAGTCCAGCATCAGAAGGCAGAGGCAGCATCAGTGACTCCCAGCCATGGAATGAACGGAGGACACAGAGCTCAGAGACAGAACAGGCCAGGGGGAAGAAGGAGAGACAGAATAGGCCAGGGCATGGCGGTGAGGGACTGAGGCCCCTAAATTTTGGTCCCAGGGGAAAGGAAGAGGCCAGTTGGTCCAGTTTTGATGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:159918204|159918596 hsa-miR-197-5p 0 0 1
chr1:159918204|159918596 hsa-miR-197-3p 0 0 1
chr1:159918204|159918596 hsa-miR-204-5p 0 0 1
chr1:159918204|159918596 hsa-miR-204-3p 0 0 1
chr1:159918204|159918596 hsa-miR-211-5p 0 0 1
chr1:159918204|159918596 hsa-miR-211-3p 0 0 1
chr1:159918204|159918596 hsa-miR-150-5p 0 0 1
chr1:159918204|159918596 hsa-miR-150-3p 0 0 1
chr1:159918204|159918596 hsa-miR-422a 0 0 1
chr1:159918204|159918596 hsa-miR-193b-5p 0 0 1
chr1:159918204|159918596 hsa-miR-193b-3p 0 0 1
chr1:159918204|159918596 hsa-miR-587 0 0 1
chr1:159918204|159918596 hsa-miR-593-5p 0 0 1
chr1:159918204|159918596 hsa-miR-593-3p 0 0 1
chr1:159918204|159918596 hsa-miR-604 0 0 1
chr1:159918204|159918596 hsa-miR-608 0 0 1
chr1:159918204|159918596 hsa-miR-623 1 1 1
chr1:159918204|159918596 hsa-miR-637 1 0 1
chr1:159918204|159918596 hsa-miR-647 0 1 1
chr1:159918204|159918596 hsa-miR-1323 0 0 1
chr1:159918204|159918596 hsa-miR-1298-5p 0 0 1
chr1:159918204|159918596 hsa-miR-1298-3p 0 0 1
chr1:159918204|159918596 hsa-miR-765 0 0 1
chr1:159918204|159918596 hsa-miR-874-5p 0 0 1
chr1:159918204|159918596 hsa-miR-874-3p 0 0 1
chr1:159918204|159918596 hsa-miR-873-5p 0 0 1
chr1:159918204|159918596 hsa-miR-873-3p 0 0 1
chr1:159918204|159918596 hsa-miR-943 0 0 1
chr1:159918204|159918596 hsa-miR-1178-5p 0 0 1
chr1:159918204|159918596 hsa-miR-1178-3p 0 0 1
chr1:159918204|159918596 hsa-miR-1236-5p 0 0 1
chr1:159918204|159918596 hsa-miR-1236-3p 0 0 1
chr1:159918204|159918596 hsa-miR-1237-5p 0 0 1
chr1:159918204|159918596 hsa-miR-1237-3p 0 0 1
chr1:159918204|159918596 hsa-miR-1204 0 0 1
chr1:159918204|159918596 hsa-miR-1205 0 0 1
chr1:159918204|159918596 hsa-miR-1208 0 0 1
chr1:159918204|159918596 hsa-miR-548e-5p 0 0 1
chr1:159918204|159918596 hsa-miR-548e-3p 0 0 1
chr1:159918204|159918596 hsa-miR-1286 0 0 1
chr1:159918204|159918596 hsa-miR-1287-5p 0 0 1
chr1:159918204|159918596 hsa-miR-1287-3p 0 0 1
chr1:159918204|159918596 hsa-miR-1248 0 1 1
chr1:159918204|159918596 hsa-miR-548o-3p 0 0 1
chr1:159918204|159918596 hsa-miR-1288-5p 0 0 1
chr1:159918204|159918596 hsa-miR-1288-3p 0 0 1
chr1:159918204|159918596 hsa-miR-1321 0 1 1
chr1:159918204|159918596 hsa-miR-548o 0 0 1
chr1:159918204|159918596 hsa-miR-486-3p 0 0 1
chr1:159918204|159918596 hsa-miR-532-3p 0 1 1
chr1:159918204|159918596 hsa-miR-1283 0 0 1
chr1:159918204|159918596 hsa-miR-885-3p 0 0 1
chr1:159918204|159918596 hsa-miR-146b-3p 0 0 1
chr1:159918204|159918596 hsa-miR-331-3p 0 1 1
chr1:159918204|159918596 hsa-miR-188-3p 0 1 1
chr1:159918204|159918596 hsa-miR-1207-5p 1 0 1
chr1:159918204|159918596 hsa-miR-324-3p 1 0 1
chr1:159918204|159918596 hsa-miR-455-3p 0 0 1
chr1:159918204|159918596 hsa-miR-193a-3p 0 0 1
chr1:159918204|159918596 hsa-miR-548a-3p 0 1 1
chr1:159918204|159918596 hsa-miR-220b 0 0 1
chr1:159918204|159918596 hsa-miR-1274a 0 0 1
chr1:159918204|159918596 hsa-miR-378 0 0 1
chr1:159918204|159918596 hsa-miR-1269 0 0 1
chr1:159918204|159918596 hsa-miR-548f 0 0 1
chr1:159918204|159918596 hsa-miR-326 1 0 0
chr1:159918204|159918596 hsa-miR-612 1 0 0
chr1:159918204|159918596 hsa-miR-661 1 0 0
chr1:159918204|159918596 hsa-miR-663a 1 0 0
chr1:159918204|159918596 hsa-miR-940 1 0 0
chr1:159918204|159918596 hsa-miR-1181 1 0 0
chr1:159918204|159918596 hsa-miR-1269a 1 1 0
chr1:159918204|159918596 hsa-miR-1322 1 0 0
chr1:159918204|159918596 hsa-miR-1913 0 1 0
chr1:159918204|159918596 hsa-miR-3176 0 1 0
chr1:159918204|159918596 hsa-miR-3181 1 0 0
chr1:159918204|159918596 hsa-miR-3196 1 0 0
chr1:159918204|159918596 hsa-miR-4313 1 0 0
chr1:159918204|159918596 hsa-miR-3654 0 1 0
chr1:159918204|159918596 hsa-miR-3921 0 1 0
chr1:159918204|159918596 hsa-miR-4420 1 1 0
chr1:159918204|159918596 hsa-miR-378g 1 0 0
chr1:159918204|159918596 hsa-miR-4498 1 0 0
chr1:159918204|159918596 hsa-miR-4515 1 0 0
chr1:159918204|159918596 hsa-miR-1269b 1 1 0
chr1:159918204|159918596 hsa-miR-4682 1 0 0
chr1:159918204|159918596 hsa-miR-4706 1 0 0
chr1:159918204|159918596 hsa-miR-4739 1 1 0
chr1:159918204|159918596 hsa-miR-5787 1 0 0
chr1:159918204|159918596 hsa-miR-6133 1 0 0
chr1:159918204|159918596 hsa-miR-7150 0 1 0
chr1:159918204|159918596 hsa-miR-8073 1 0 0
chr1:159918204|159918596 hsa-miR-135a-3p 1 1 0
chr1:159918204|159918596 hsa-miR-511-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6749-3p 1 0 0
chr1:159918204|159918596 hsa-miR-92a-1-5p 1 0 0
chr1:159918204|159918596 hsa-miR-128-1-5p 1 0 0
chr1:159918204|159918596 hsa-miR-1233-3p 1 0 0
chr1:159918204|159918596 hsa-miR-3692-3p 0 1 0
chr1:159918204|159918596 hsa-miR-7114-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6875-3p 1 1 0
chr1:159918204|159918596 hsa-miR-4474-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6842-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6721-5p 1 1 0
chr1:159918204|159918596 hsa-miR-6873-3p 1 1 0
chr1:159918204|159918596 hsa-miR-7110-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6841-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6817-3p 1 0 0
chr1:159918204|159918596 hsa-miR-1915-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6845-3p 1 1 0
chr1:159918204|159918596 hsa-miR-3180-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6793-5p 1 0 0
chr1:159918204|159918596 hsa-miR-877-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6868-3p 0 1 0
chr1:159918204|159918596 hsa-miR-4753-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6782-5p 0 1 0
chr1:159918204|159918596 hsa-miR-4793-3p 0 1 0
chr1:159918204|159918596 hsa-miR-5008-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6735-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6882-3p 1 1 0
chr1:159918204|159918596 hsa-miR-4713-5p 0 1 0
chr1:159918204|159918596 hsa-miR-6815-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6884-3p 1 0 0
chr1:159918204|159918596 hsa-miR-615-5p 1 0 0
chr1:159918204|159918596 hsa-miR-4738-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6803-3p 1 0 0
chr1:159918204|159918596 hsa-miR-4691-3p 0 1 0
chr1:159918204|159918596 hsa-miR-5010-3p 1 0 0
chr1:159918204|159918596 hsa-miR-5001-3p 1 1 0
chr1:159918204|159918596 hsa-miR-7113-3p 1 0 0
chr1:159918204|159918596 hsa-miR-3667-3p 1 1 0
chr1:159918204|159918596 hsa-miR-3191-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6878-3p 1 1 0
chr1:159918204|159918596 hsa-miR-4743-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6818-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6780a-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6830-3p 1 1 0
chr1:159918204|159918596 hsa-miR-1266-3p 0 1 0
chr1:159918204|159918596 hsa-miR-4667-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6739-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6789-5p 1 1 0
chr1:159918204|159918596 hsa-miR-4646-3p 1 0 0
chr1:159918204|159918596 hsa-miR-7160-3p 1 0 0
chr1:159918204|159918596 hsa-miR-1250-5p 1 0 0
chr1:159918204|159918596 hsa-miR-3120-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6811-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6785-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6813-3p 1 0 0
chr1:159918204|159918596 hsa-miR-4732-3p 1 1 0
chr1:159918204|159918596 hsa-miR-4778-3p 0 1 0
chr1:159918204|159918596 hsa-miR-1910-5p 1 0 0
chr1:159918204|159918596 hsa-miR-361-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6837-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6895-3p 1 1 0
chr1:159918204|159918596 hsa-miR-5088-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6738-3p 1 0 0
chr1:159918204|159918596 hsa-miR-328-3p 1 0 0
chr1:159918204|159918596 hsa-miR-3670 1 0 0
chr1:159918204|159918596 hsa-miR-449b-3p 0 1 0
chr1:159918204|159918596 hsa-miR-1229-3p 1 0 0
chr1:159918204|159918596 hsa-miR-3173-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6734-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6515-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6729-3p 1 0 0
chr1:159918204|159918596 hsa-miR-3157-3p 0 1 0
chr1:159918204|159918596 hsa-miR-6890-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6888-3p 1 1 0
chr1:159918204|159918596 hsa-miR-4652-3p 1 0 0
chr1:159918204|159918596 hsa-miR-4482-3p 0 1 0
chr1:159918204|159918596 hsa-miR-10400-5p 1 0 0
chr1:159918204|159918596 hsa-miR-4763-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6787-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6816-5p 1 0 0
chr1:159918204|159918596 hsa-miR-5001-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6743-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6813-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6722-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6779-5p 1 0 0
chr1:159918204|159918596 hsa-miR-320a-5p 1 0 0
chr1:159918204|159918596 hsa-miR-4755-5p 0 1 0
chr1:159918204|159918596 hsa-miR-6754-3p 1 0 0
chr1:159918204|159918596 hsa-miR-3620-5p 1 0 0
chr1:159918204|159918596 hsa-miR-4728-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6836-5p 1 0 0
chr1:159918204|159918596 hsa-miR-10396b-5p 1 0 0
chr1:159918204|159918596 hsa-miR-1909-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6856-5p 1 0 0
chr1:159918204|159918596 hsa-miR-5008-3p 1 1 0
chr1:159918204|159918596 hsa-miR-1914-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6877-3p 1 1 0
chr1:159918204|159918596 hsa-miR-3184-5p 1 1 0
chr1:159918204|159918596 hsa-miR-6791-5p 1 1 0
chr1:159918204|159918596 hsa-miR-6753-3p 1 0 0
chr1:159918204|159918596 hsa-miR-7107-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6862-3p 1 0 0
chr1:159918204|159918596 hsa-miR-10401-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6805-3p 1 0 0
chr1:159918204|159918596 hsa-miR-10400-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6511b-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6751-3p 1 0 0
chr1:159918204|159918596 hsa-miR-330-5p 1 1 0
chr1:159918204|159918596 hsa-miR-6744-3p 0 1 0
chr1:159918204|159918596 hsa-miR-4691-5p 1 0 0
chr1:159918204|159918596 hsa-miR-6876-3p 1 1 0
chr1:159918204|159918596 hsa-miR-6827-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6833-3p 1 0 0
chr1:159918204|159918596 hsa-miR-6737-3p 0 1 0
chr1:159918204|159918596 hsa-miR-5699-3p 0 1 0
chr1:159918204|159918596 hsa-miR-4315 1 0 0
chr1:159918204|159918596 hsa-miR-3922-3p 0 1 0
chr1:159918204|159918596 hsa-miR-1250-3p 0 1 0
chr1:159918204|159918596 hsa-miR-135b-5p 0 1 0
chr1:159918204|159918596 hsa-miR-26a-2-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:159918204|159918596
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence MRSHEGPCQGRLPQMCGEHSQCSCGWGSSCHRLLPIN
Nucleotide Sequence ATGAGAAGCCACGAGGGCCCCTGCCAGGGAAGGCTGCCCCAGATGTGTGGTGAGCACAGTCAGTGCAGCTGTGGCTGGGGCAGCAGCTGCCACAGGCTCCTCCCTATAAATTAA
CircID chr1:159918204|159918596
ORF Type ORF2
Protein Length 80
Nucleotide Length 240
Protein Sequence MQPQLWEKHTCRSKASPASEGRGSISDSQPWNERRTQSSETEQARGKKERQNRPGHGGEGLRPLNFGPRGKEEASWSSFD
Nucleotide Sequence CTGCAGCCACAGCTGTGGGAGAAGCATACTTGTAGAAGCAAGGCCAGTCCAGCATCAGAAGGCAGAGGCAGCATCAGTGACTCCCAGCCATGGAATGAACGGAGGACACAGAGCTCAGAGACAGAACAGGCCAGGGGGAAGAAGGAGAGACAGAATAGGCCAGGGCATGGCGGTGAGGGACTGAGGCCCCTAAATTTTGGTCCCAGGGGAAAGGAAGAGGCCAGTTGGTCCAGTTTTGAT
CircID chr1:159918204|159918596
ORF Type ORF3
Protein Length 77
Nucleotide Length 234
Protein Sequence MWLGQQLPQAPPYKLSSCSHSCGRSILVEARPVQHQKAEAASVTPSHGMNGGHRAQRQNRPGGRRRDRIGQGMAVRD
Nucleotide Sequence CTGTGGCTGGGGCAGCAGCTGCCACAGGCTCCTCCCTATAAATTAAGTTCCTGCAGCCACAGCTGTGGGAGAAGCATACTTGTAGAAGCAAGGCCAGTCCAGCATCAGAAGGCAGAGGCAGCATCAGTGACTCCCAGCCATGGAATGAACGGAGGACACAGAGCTCAGAGACAGAACAGGCCAGGGGGAAGAAGGAGAGACAGAATAGGCCAGGGCATGGCGGTGAGGGACTGA
CircID chr1:159918204|159918596
ORF Type ORF4
Protein Length 128
Nucleotide Length 384
Protein Sequence MDQLASSFPLGPKFRGLSPSPPCPGLFCLSFFPLACSVSELCVLRSFHGWESLMLPLPSDAGLALLLQVCFSHSCGCRNLIYREEPVAAAAPATAALTVLTTHLGQPSLAGALVASHFPFPSLWLRGG
Nucleotide Sequence CTGGACCAACTGGCCTCTTCCTTTCCCCTGGGACCAAAATTTAGGGGCCTCAGTCCCTCACCGCCATGCCCTGGCCTATTCTGTCTCTCCTTCTTCCCCCTGGCCTGTTCTGTCTCTGAGCTCTGTGTCCTCCGTTCATTCCATGGCTGGGAGTCACTGATGCTGCCTCTGCCTTCTGATGCTGGACTGGCCTTGCTTCTACAAGTATGCTTCTCCCACAGCTGTGGCTGCAGGAACTTAATTTATAGGGAGGAGCCTGTGGCAGCTGCTGCCCCAGCCACAGCTGCACTGACTGTGCTCACCACACATCTGGGGCAGCCTTCCCTGGCAGGGGCCCTCGTGGCTTCTCATTTTCCATTCCCTTCACTGTGGCTAAGGGGTGGG
CircID chr1:159918204|159918596
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MAYSVSPSSPWPVLSLSSVSSVHSMAGSH
Nucleotide Sequence CTGGCCTATTCTGTCTCTCCTTCTTCCCCCTGGCCTGTTCTGTCTCTGAGCTCTGTGTCCTCCGTTCATTCCATGGCTGGGAGTCACTGA
CircID chr1:159918204|159918596
ORF Type ORF6
Protein Length 27
Nucleotide Length 84
Protein Sequence MCSPHIWGSLPWQGPSWLLIFHSLHCG
Nucleotide Sequence CTGTGCTCACCACACATCTGGGGCAGCCTTCCCTGGCAGGGGCCCTCGTGGCTTCTCATTTTCCATTCCCTTCACTGTGGCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab