CircRNA Information

General Information
circRNA Basic Information
CircID chr1:159918416|159918526
Strand +
CircType exon
Host Gene ENSG00000158710.13;
Algorism CIRI2;
Sequence CGCCATGCCCTGGCCTATTCTGTCTCTCCTTCTTCCCCCTGGCCTGTTCTGTCTCTGAGCTCTGTGTCCTCCGTTCATTCCATGGCTGGGAGTCACTGATGCTGCCTCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:159918416|159918526 hsa-miR-107 0 0 1
chr1:159918416|159918526 hsa-miR-185-5p 0 0 1
chr1:159918416|159918526 hsa-miR-185-3p 0 0 1
chr1:159918416|159918526 hsa-miR-206 0 0 1
chr1:159918416|159918526 hsa-miR-613 0 0 1
chr1:159918416|159918526 hsa-miR-625-5p 0 0 1
chr1:159918416|159918526 hsa-miR-625-3p 0 0 1
chr1:159918416|159918526 hsa-miR-887-5p 0 0 1
chr1:159918416|159918526 hsa-miR-887-3p 0 0 1
chr1:159918416|159918526 hsa-miR-1197 0 0 1
chr1:159918416|159918526 hsa-miR-1827 0 0 1
chr1:159918416|159918526 hsa-miR-103 0 0 1
chr1:159918416|159918526 hsa-miR-1 0 0 1
chr1:159918416|159918526 hsa-miR-650 1 0 0
chr1:159918416|159918526 hsa-miR-658 1 0 0
chr1:159918416|159918526 hsa-miR-765 1 0 0
chr1:159918416|159918526 hsa-miR-1275 1 0 0
chr1:159918416|159918526 hsa-miR-711 1 0 0
chr1:159918416|159918526 hsa-miR-2861 1 0 0
chr1:159918416|159918526 hsa-miR-3141 1 0 0
chr1:159918416|159918526 hsa-miR-3154 1 0 0
chr1:159918416|159918526 hsa-miR-3175 1 0 0
chr1:159918416|159918526 hsa-miR-3185 1 1 0
chr1:159918416|159918526 hsa-miR-4298 1 0 0
chr1:159918416|159918526 hsa-miR-4270 1 0 0
chr1:159918416|159918526 hsa-miR-4271 1 1 0
chr1:159918416|159918526 hsa-miR-4276 0 1 0
chr1:159918416|159918526 hsa-miR-4436a 1 0 0
chr1:159918416|159918526 hsa-miR-4437 1 0 0
chr1:159918416|159918526 hsa-miR-4462 1 0 0
chr1:159918416|159918526 hsa-miR-4476 1 0 0
chr1:159918416|159918526 hsa-miR-4488 1 0 0
chr1:159918416|159918526 hsa-miR-4510 1 0 0
chr1:159918416|159918526 hsa-miR-4516 1 0 0
chr1:159918416|159918526 hsa-miR-4525 1 0 0
chr1:159918416|159918526 hsa-miR-4533 1 0 0
chr1:159918416|159918526 hsa-miR-4644 1 1 0
chr1:159918416|159918526 hsa-miR-4656 1 0 0
chr1:159918416|159918526 hsa-miR-4689 1 0 0
chr1:159918416|159918526 hsa-miR-4706 1 0 0
chr1:159918416|159918526 hsa-miR-4739 1 0 0
chr1:159918416|159918526 hsa-miR-4751 1 0 0
chr1:159918416|159918526 hsa-miR-5090 1 0 0
chr1:159918416|159918526 hsa-miR-5190 0 1 0
chr1:159918416|159918526 hsa-miR-5192 1 0 0
chr1:159918416|159918526 hsa-miR-5698 1 0 0
chr1:159918416|159918526 hsa-miR-5739 1 0 0
chr1:159918416|159918526 hsa-miR-6075 1 0 0
chr1:159918416|159918526 hsa-miR-6090 1 0 0
chr1:159918416|159918526 hsa-miR-6124 1 0 0
chr1:159918416|159918526 hsa-miR-6127 1 0 0
chr1:159918416|159918526 hsa-miR-6133 1 0 0
chr1:159918416|159918526 hsa-miR-6745 1 0 0
chr1:159918416|159918526 hsa-miR-7977 0 1 0
chr1:159918416|159918526 hsa-miR-8085 1 0 0
chr1:159918416|159918526 hsa-miR-8089 1 0 0
chr1:159918416|159918526 hsa-miR-9500 1 0 0
chr1:159918416|159918526 hsa-miR-12118 1 0 0
chr1:159918416|159918526 hsa-miR-12122 1 0 0
chr1:159918416|159918526 hsa-miR-12128 1 0 0
chr1:159918416|159918526 hsa-miR-211-3p 1 0 0
chr1:159918416|159918526 hsa-miR-504-3p 1 0 0
chr1:159918416|159918526 hsa-miR-3150a-3p 1 0 0
chr1:159918416|159918526 hsa-miR-7106-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6825-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6894-5p 1 1 0
chr1:159918416|159918526 hsa-miR-1972 1 1 0
chr1:159918416|159918526 hsa-miR-125a-3p 1 0 0
chr1:159918416|159918526 hsa-miR-6854-5p 0 1 0
chr1:159918416|159918526 hsa-miR-6510-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6728-5p 1 1 0
chr1:159918416|159918526 hsa-miR-1236-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6089 1 0 0
chr1:159918416|159918526 hsa-miR-6873-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6880-5p 1 0 0
chr1:159918416|159918526 hsa-miR-7847-3p 1 0 0
chr1:159918416|159918526 hsa-miR-4695-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6746-5p 1 0 0
chr1:159918416|159918526 hsa-miR-7154-3p 1 0 0
chr1:159918416|159918526 hsa-miR-4755-3p 1 0 0
chr1:159918416|159918526 hsa-miR-6820-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6721-5p 1 0 0
chr1:159918416|159918526 hsa-miR-4655-5p 1 0 0
chr1:159918416|159918526 hsa-miR-7845-5p 1 1 0
chr1:159918416|159918526 hsa-miR-3180-3p 1 0 0
chr1:159918416|159918526 hsa-miR-4697-3p 1 1 0
chr1:159918416|159918526 hsa-miR-6732-5p 1 0 0
chr1:159918416|159918526 hsa-miR-3190-3p 1 0 0
chr1:159918416|159918526 hsa-miR-6805-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6798-5p 1 1 0
chr1:159918416|159918526 hsa-miR-3126-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6760-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6881-5p 1 0 0
chr1:159918416|159918526 hsa-miR-2467-3p 1 1 0
chr1:159918416|159918526 hsa-miR-6810-5p 1 0 0
chr1:159918416|159918526 hsa-miR-5006-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6835-5p 1 0 0
chr1:159918416|159918526 hsa-miR-5088-5p 1 1 0
chr1:159918416|159918526 hsa-miR-7109-5p 1 0 0
chr1:159918416|159918526 hsa-miR-1226-5p 1 0 0
chr1:159918416|159918526 hsa-miR-4640-5p 1 0 0
chr1:159918416|159918526 hsa-miR-4690-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6749-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6847-5p 1 0 0
chr1:159918416|159918526 hsa-miR-3648 1 0 0
chr1:159918416|159918526 hsa-miR-3616-3p 1 0 0
chr1:159918416|159918526 hsa-miR-6824-5p 1 0 0
chr1:159918416|159918526 hsa-miR-5010-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6895-5p 1 0 0
chr1:159918416|159918526 hsa-miR-345-5p 1 0 0
chr1:159918416|159918526 hsa-miR-4773 1 0 0
chr1:159918416|159918526 hsa-miR-6801-5p 1 0 0
chr1:159918416|159918526 hsa-miR-1295b-3p 1 1 0
chr1:159918416|159918526 hsa-miR-214-3p 1 0 0
chr1:159918416|159918526 hsa-miR-338-3p 0 1 0
chr1:159918416|159918526 hsa-miR-1233-5p 1 0 0
chr1:159918416|159918526 hsa-miR-4763-3p 1 0 0
chr1:159918416|159918526 hsa-miR-6778-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6787-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6870-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6842-5p 1 0 0
chr1:159918416|159918526 hsa-miR-11181-3p 1 0 0
chr1:159918416|159918526 hsa-miR-1249-5p 1 1 0
chr1:159918416|159918526 hsa-miR-6797-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6808-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6875-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6879-5p 1 0 0
chr1:159918416|159918526 hsa-miR-7111-5p 1 1 0
chr1:159918416|159918526 hsa-miR-5196-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6780b-5p 1 0 0
chr1:159918416|159918526 hsa-miR-1237-5p 1 0 0
chr1:159918416|159918526 hsa-miR-328-5p 1 0 0
chr1:159918416|159918526 hsa-miR-4649-5p 1 0 0
chr1:159918416|159918526 hsa-miR-4685-5p 1 1 0
chr1:159918416|159918526 hsa-miR-4725-3p 1 0 0
chr1:159918416|159918526 hsa-miR-4726-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6729-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6735-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6794-5p 1 1 0
chr1:159918416|159918526 hsa-miR-6795-5p 1 1 0
chr1:159918416|159918526 hsa-miR-6887-5p 1 1 0
chr1:159918416|159918526 hsa-miR-4436b-3p 1 0 0
chr1:159918416|159918526 hsa-miR-4723-5p 1 0 0
chr1:159918416|159918526 hsa-miR-1266-5p 1 1 0
chr1:159918416|159918526 hsa-miR-34b-5p 0 1 0
chr1:159918416|159918526 hsa-miR-6511a-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6731-5p 1 0 0
chr1:159918416|159918526 hsa-miR-3173-3p 1 0 0
chr1:159918416|159918526 hsa-miR-3679-5p 1 0 0
chr1:159918416|159918526 hsa-miR-4747-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6876-5p 1 0 0
chr1:159918416|159918526 hsa-miR-4716-3p 1 1 0
chr1:159918416|159918526 hsa-miR-541-3p 1 0 0
chr1:159918416|159918526 hsa-miR-6785-5p 1 0 0
chr1:159918416|159918526 hsa-miR-6837-5p 1 0 0
chr1:159918416|159918526 hsa-miR-3619-5p 1 0 0
chr1:159918416|159918526 hsa-miR-642a-3p 1 0 0
chr1:159918416|159918526 hsa-miR-664a-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:159918416|159918526
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MAYSVSPSSPWPVLSLSSVSSVHSMAGSH
Nucleotide Sequence CTGGCCTATTCTGTCTCTCCTTCTTCCCCCTGGCCTGTTCTGTCTCTGAGCTCTGTGTCCTCCGTTCATTCCATGGCTGGGAGTCACTGA
CircID chr1:159918416|159918526
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MNGGHRAQRQNRPGGRRRDRIGQGMA
Nucleotide Sequence ATGAACGGAGGACACAGAGCTCAGAGACAGAACAGGCCAGGGGGAAGAAGGAGAGACAGAATAGGCCAGGGCATGGCG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab