CircRNA Information

General Information
circRNA Basic Information
CircID chr1:160029913|160030083
Strand +
CircType exon
Host Gene ENSG00000143315.6;
Algorism CIRI2;
Sequence CCATCTTTTCTTTCTAAAGCTTTCCTGACAGCTGTGAAAATCCAAAAAATATTCTTAAACTGTGTATGGTGGCCCTTGCCTGTAGTCTCAGCACTTTGGGAGGCTGAGGTGGGAGGGTCGCTTGAGTTCAGGAGTTCTAGACCCACCTGGGGCAAGATGGTGAGACCTAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:160029913|160030083 hsa-miR-17-5p 0 0 1
chr1:160029913|160030083 hsa-miR-17-3p 0 0 1
chr1:160029913|160030083 hsa-miR-20a-5p 0 0 1
chr1:160029913|160030083 hsa-miR-20a-3p 0 0 1
chr1:160029913|160030083 hsa-miR-27a-5p 0 0 1
chr1:160029913|160030083 hsa-miR-27a-3p 0 0 1
chr1:160029913|160030083 hsa-miR-93-5p 0 0 1
chr1:160029913|160030083 hsa-miR-93-3p 0 0 1
chr1:160029913|160030083 hsa-miR-106a-5p 0 0 1
chr1:160029913|160030083 hsa-miR-106a-3p 0 0 1
chr1:160029913|160030083 hsa-miR-27b-5p 0 0 1
chr1:160029913|160030083 hsa-miR-27b-3p 0 0 1
chr1:160029913|160030083 hsa-miR-150-5p 0 0 1
chr1:160029913|160030083 hsa-miR-150-3p 0 0 1
chr1:160029913|160030083 hsa-miR-106b-5p 0 0 1
chr1:160029913|160030083 hsa-miR-106b-3p 0 0 1
chr1:160029913|160030083 hsa-miR-302a-5p 0 0 1
chr1:160029913|160030083 hsa-miR-302a-3p 0 0 1
chr1:160029913|160030083 hsa-miR-302b-5p 0 0 1
chr1:160029913|160030083 hsa-miR-302b-3p 0 0 1
chr1:160029913|160030083 hsa-miR-302c-5p 0 0 1
chr1:160029913|160030083 hsa-miR-302c-3p 0 0 1
chr1:160029913|160030083 hsa-miR-302d-5p 0 0 1
chr1:160029913|160030083 hsa-miR-302d-3p 0 0 1
chr1:160029913|160030083 hsa-miR-372-5p 0 0 1
chr1:160029913|160030083 hsa-miR-372-3p 0 0 1
chr1:160029913|160030083 hsa-miR-373-5p 0 0 1
chr1:160029913|160030083 hsa-miR-373-3p 0 0 1
chr1:160029913|160030083 hsa-miR-20b-5p 0 0 1
chr1:160029913|160030083 hsa-miR-20b-3p 0 0 1
chr1:160029913|160030083 hsa-miR-520e-5p 0 0 1
chr1:160029913|160030083 hsa-miR-520e-3p 0 0 1
chr1:160029913|160030083 hsa-miR-520b-5p 0 0 1
chr1:160029913|160030083 hsa-miR-520b-3p 0 0 1
chr1:160029913|160030083 hsa-miR-519d-5p 0 0 1
chr1:160029913|160030083 hsa-miR-519d-3p 0 0 1
chr1:160029913|160030083 hsa-miR-520g-5p 0 0 1
chr1:160029913|160030083 hsa-miR-520g-3p 0 0 1
chr1:160029913|160030083 hsa-miR-520h 0 0 1
chr1:160029913|160030083 hsa-miR-601 0 1 1
chr1:160029913|160030083 hsa-miR-873-5p 0 0 1
chr1:160029913|160030083 hsa-miR-873-3p 0 0 1
chr1:160029913|160030083 hsa-miR-1229-5p 0 0 1
chr1:160029913|160030083 hsa-miR-1229-3p 0 0 1
chr1:160029913|160030083 hsa-miR-1290 0 0 1
chr1:160029913|160030083 hsa-miR-302e 0 0 1
chr1:160029913|160030083 hsa-miR-129-5p 0 0 1
chr1:160029913|160030083 hsa-miR-512-3p 0 1 1
chr1:160029913|160030083 hsa-miR-532-3p 0 0 1
chr1:160029913|160030083 hsa-miR-193a-5p 0 0 1
chr1:160029913|160030083 hsa-miR-1224-3p 0 1 1
chr1:160029913|160030083 hsa-miR-513a-5p 0 0 1
chr1:160029913|160030083 hsa-miR-520d-3p 0 0 1
chr1:160029913|160030083 hsa-miR-876-5p 0 0 1
chr1:160029913|160030083 hsa-miR-520a-3p 0 0 1
chr1:160029913|160030083 hsa-miR-520c-3p 0 0 1
chr1:160029913|160030083 hsa-miR-1260 0 0 1
chr1:160029913|160030083 hsa-miR-1280 0 0 1
chr1:160029913|160030083 hsa-miR-1260a 0 1 0
chr1:160029913|160030083 hsa-miR-1260b 0 1 0
chr1:160029913|160030083 hsa-miR-4476 0 1 0
chr1:160029913|160030083 hsa-miR-4539 0 1 0
chr1:160029913|160030083 hsa-miR-12113 0 1 0
chr1:160029913|160030083 hsa-miR-12128 1 0 0
chr1:160029913|160030083 hsa-miR-4726-3p 1 0 0
chr1:160029913|160030083 hsa-miR-4713-5p 0 1 0
chr1:160029913|160030083 hsa-miR-6772-3p 1 0 0
chr1:160029913|160030083 hsa-miR-4640-5p 1 0 0
chr1:160029913|160030083 hsa-miR-5004-3p 0 1 0
chr1:160029913|160030083 hsa-miR-6895-5p 1 1 0
chr1:160029913|160030083 hsa-miR-4742-5p 0 1 0
chr1:160029913|160030083 hsa-miR-1285-5p 0 1 0
chr1:160029913|160030083 hsa-miR-3670 0 1 0
chr1:160029913|160030083 hsa-miR-1207-5p 1 0 0
chr1:160029913|160030083 hsa-miR-4763-3p 1 0 0
chr1:160029913|160030083 hsa-miR-6769a-5p 0 1 0
chr1:160029913|160030083 hsa-miR-1909-3p 1 0 0
chr1:160029913|160030083 hsa-miR-10396a-3p 1 0 0
chr1:160029913|160030083 hsa-miR-10396b-3p 1 0 0
chr1:160029913|160030083 hsa-miR-6511a-3p 0 1 0
chr1:160029913|160030083 hsa-miR-619-5p 0 1 0
chr1:160029913|160030083 hsa-miR-154-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:160029913|160030083
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MTAVKIQKIFLNCVWWPLPVVSALWEAEVGGSLEFRSSRPTWGKMVRPS
Nucleotide Sequence CTGACAGCTGTGAAAATCCAAAAAATATTCTTAAACTGTGTATGGTGGCCCTTGCCTGTAGTCTCAGCACTTTGGGAGGCTGAGGTGGGAGGGTCGCTTGAGTTCAGGAGTTCTAGACCCACCTGGGGCAAGATGGTGAGACCTAGT

CircID chr1:160029913|160030083
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MPQVGLELLNSSDPPTSASQSAETTGKGHHTQFKNIFWIFTAVRKALERKD
Nucleotide Sequence TTGCCCCAGGTGGGTCTAGAACTCCTGAACTCAAGCGACCCTCCCACCTCAGCCTCCCAAAGTGCTGAGACTACAGGCAAGGGCCACCATACACAGTTTAAGAATATTTTTTGGATTTTCACAGCTGTCAGGAAAGCTTTAGAAAGAAAAGAT

CircID chr1:160029913|160030083
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MRLQARATIHSLRIFFGFSQLSGKL
Nucleotide Sequence CTGAGACTACAGGCAAGGGCCACCATACACAGTTTAAGAATATTTTTTGGATTTTCACAGCTGTCAGGAAAGCTTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites