CircRNA Information

General Information
circRNA Basic Information
CircID chr1:160214445|160214714
Strand +
CircType exon
Host Gene ENSG00000162734.11;
Algorism CIRI2;
Sequence TGTGGCATTCCCCTCCCACCCCCGCTCTGGCCTAGACAATAAGTTAATGCTAGACACCACAAAAAAGGGCAGACATGGCAGTGCAGTTTTAATATACATATATGTAGAATATATATGTACACACAGTTAGCACGGTCAGGGTGGGGAGGGGCATCTTGGGGTAGGCAGGAGGCTGGGGTCACTCACTGTACTGTAGTGATGTGGCTAGGAGGTGTTCACAAGCCCAGGGGGCCAGGATATCTAGTAAAGAAGGGTTTCCTAAGTAAGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:160214445|160214714 hsa-miR-144-5p 0 0 1
chr1:160214445|160214714 hsa-miR-144-3p 0 0 1
chr1:160214445|160214714 hsa-miR-346 0 0 1
chr1:160214445|160214714 hsa-miR-608 1 1 1
chr1:160214445|160214714 hsa-miR-632 0 1 1
chr1:160214445|160214714 hsa-miR-645 0 0 1
chr1:160214445|160214714 hsa-miR-656-5p 0 0 1
chr1:160214445|160214714 hsa-miR-656-3p 0 0 1
chr1:160214445|160214714 hsa-miR-892a 0 0 1
chr1:160214445|160214714 hsa-miR-938 0 0 1
chr1:160214445|160214714 hsa-miR-1179 0 0 1
chr1:160214445|160214714 hsa-miR-548e-5p 0 0 1
chr1:160214445|160214714 hsa-miR-548e-3p 0 0 1
chr1:160214445|160214714 hsa-miR-1248 0 0 1
chr1:160214445|160214714 hsa-miR-139-5p 1 1 1
chr1:160214445|160214714 hsa-miR-129-5p 0 0 1
chr1:160214445|160214714 hsa-miR-28-3p 0 1 1
chr1:160214445|160214714 hsa-miR-331-3p 1 0 1
chr1:160214445|160214714 hsa-miR-654-3p 0 0 1
chr1:160214445|160214714 hsa-miR-34c-3p 0 0 1
chr1:160214445|160214714 hsa-miR-324-3p 0 0 1
chr1:160214445|160214714 hsa-miR-548a-3p 0 0 1
chr1:160214445|160214714 hsa-miR-548f 0 0 1
chr1:160214445|160214714 hsa-miR-499-3p 0 0 1
chr1:160214445|160214714 hsa-miR-101 0 0 1
chr1:160214445|160214714 hsa-miR-596 1 0 0
chr1:160214445|160214714 hsa-miR-663b 1 0 0
chr1:160214445|160214714 hsa-miR-1268a 1 0 0
chr1:160214445|160214714 hsa-miR-1913 1 0 0
chr1:160214445|160214714 hsa-miR-1976 1 1 0
chr1:160214445|160214714 hsa-miR-3141 1 0 0
chr1:160214445|160214714 hsa-miR-4313 0 1 0
chr1:160214445|160214714 hsa-miR-3924 0 1 0
chr1:160214445|160214714 hsa-miR-1268b 1 0 0
chr1:160214445|160214714 hsa-miR-378g 0 1 0
chr1:160214445|160214714 hsa-miR-4511 1 0 0
chr1:160214445|160214714 hsa-miR-4651 1 1 0
chr1:160214445|160214714 hsa-miR-4706 1 0 0
chr1:160214445|160214714 hsa-miR-5572 1 0 0
chr1:160214445|160214714 hsa-miR-7975 0 1 0
chr1:160214445|160214714 hsa-miR-7978 0 1 0
chr1:160214445|160214714 hsa-miR-8078 1 1 0
chr1:160214445|160214714 hsa-miR-4435 1 0 0
chr1:160214445|160214714 hsa-miR-6749-3p 1 1 0
chr1:160214445|160214714 hsa-miR-18a-3p 0 1 0
chr1:160214445|160214714 hsa-miR-6747-3p 1 1 0
chr1:160214445|160214714 hsa-miR-4726-3p 1 0 0
chr1:160214445|160214714 hsa-miR-6836-3p 1 0 0
chr1:160214445|160214714 hsa-miR-766-3p 1 0 0
chr1:160214445|160214714 hsa-miR-210-5p 1 0 0
chr1:160214445|160214714 hsa-miR-150-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6089 1 0 0
chr1:160214445|160214714 hsa-miR-1225-3p 1 0 0
chr1:160214445|160214714 hsa-miR-197-5p 1 0 0
chr1:160214445|160214714 hsa-miR-3189-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6849-3p 1 1 0
chr1:160214445|160214714 hsa-miR-6845-3p 1 0 0
chr1:160214445|160214714 hsa-miR-4697-3p 0 1 0
chr1:160214445|160214714 hsa-miR-6732-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6782-5p 1 0 0
chr1:160214445|160214714 hsa-miR-4793-3p 0 1 0
chr1:160214445|160214714 hsa-miR-30b-3p 0 1 0
chr1:160214445|160214714 hsa-miR-5006-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6882-3p 1 0 0
chr1:160214445|160214714 hsa-miR-7109-3p 1 0 0
chr1:160214445|160214714 hsa-miR-939-3p 0 1 0
chr1:160214445|160214714 hsa-miR-4763-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6763-3p 1 0 0
chr1:160214445|160214714 hsa-miR-4707-3p 1 0 0
chr1:160214445|160214714 hsa-miR-1908-3p 1 0 0
chr1:160214445|160214714 hsa-miR-4640-5p 1 0 0
chr1:160214445|160214714 hsa-miR-7113-3p 1 0 0
chr1:160214445|160214714 hsa-miR-4743-5p 1 0 0
chr1:160214445|160214714 hsa-miR-4787-5p 1 1 0
chr1:160214445|160214714 hsa-miR-6786-3p 1 0 0
chr1:160214445|160214714 hsa-miR-6769a-3p 1 0 0
chr1:160214445|160214714 hsa-miR-4646-3p 1 0 0
chr1:160214445|160214714 hsa-miR-660-3p 0 1 0
chr1:160214445|160214714 hsa-miR-4732-3p 0 1 0
chr1:160214445|160214714 hsa-miR-4758-3p 1 0 0
chr1:160214445|160214714 hsa-miR-6887-3p 0 1 0
chr1:160214445|160214714 hsa-miR-6793-3p 1 0 0
chr1:160214445|160214714 hsa-miR-6886-3p 1 0 0
chr1:160214445|160214714 hsa-miR-5088-3p 1 1 0
chr1:160214445|160214714 hsa-miR-4749-3p 1 1 0
chr1:160214445|160214714 hsa-miR-328-3p 1 0 0
chr1:160214445|160214714 hsa-miR-6777-3p 1 0 0
chr1:160214445|160214714 hsa-miR-449b-3p 0 1 0
chr1:160214445|160214714 hsa-miR-4433a-5p 1 0 0
chr1:160214445|160214714 hsa-miR-1287-3p 0 1 0
chr1:160214445|160214714 hsa-miR-4433b-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6846-3p 1 0 0
chr1:160214445|160214714 hsa-miR-1249-3p 1 0 0
chr1:160214445|160214714 hsa-miR-6890-3p 0 1 0
chr1:160214445|160214714 hsa-miR-3162-3p 1 0 0
chr1:160214445|160214714 hsa-miR-4740-3p 1 0 0
chr1:160214445|160214714 hsa-miR-1233-5p 0 1 0
chr1:160214445|160214714 hsa-miR-1273h-5p 0 1 0
chr1:160214445|160214714 hsa-miR-6787-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6752-5p 1 1 0
chr1:160214445|160214714 hsa-miR-6756-5p 0 1 0
chr1:160214445|160214714 hsa-miR-6803-5p 1 1 0
chr1:160214445|160214714 hsa-miR-6819-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6842-5p 1 0 0
chr1:160214445|160214714 hsa-miR-7110-5p 1 1 0
chr1:160214445|160214714 hsa-miR-6722-3p 1 0 0
chr1:160214445|160214714 hsa-miR-6751-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6779-5p 0 1 0
chr1:160214445|160214714 hsa-miR-6780a-5p 0 1 0
chr1:160214445|160214714 hsa-miR-6879-5p 1 0 0
chr1:160214445|160214714 hsa-miR-7111-5p 1 0 0
chr1:160214445|160214714 hsa-miR-3127-3p 1 0 0
chr1:160214445|160214714 hsa-miR-4728-5p 0 1 0
chr1:160214445|160214714 hsa-miR-1237-5p 1 0 0
chr1:160214445|160214714 hsa-miR-3689a-3p 0 1 0
chr1:160214445|160214714 hsa-miR-4685-5p 1 0 0
chr1:160214445|160214714 hsa-miR-4726-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6766-5p 0 1 0
chr1:160214445|160214714 hsa-miR-6724-5p 1 0 0
chr1:160214445|160214714 hsa-miR-6791-5p 0 1 0
chr1:160214445|160214714 hsa-miR-4722-3p 1 0 0
chr1:160214445|160214714 hsa-miR-6756-3p 1 1 0
chr1:160214445|160214714 hsa-miR-6829-3p 0 1 0
chr1:160214445|160214714 hsa-miR-6751-3p 1 0 0
chr1:160214445|160214714 hsa-miR-6819-3p 1 0 0
chr1:160214445|160214714 hsa-miR-7973 0 1 0
chr1:160214445|160214714 hsa-miR-548ar-3p 0 1 0
chr1:160214445|160214714 hsa-miR-4659a-5p 0 1 0
chr1:160214445|160214714 hsa-miR-4659b-5p 0 1 0
chr1:160214445|160214714 hsa-miR-101-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:160214445|160214714
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MYTQLARSGWGGASWGRQEAGVTHCTVVMWLGGVHKPRGPGYLVKKGFLSKS
Nucleotide Sequence ATGTACACACAGTTAGCACGGTCAGGGTGGGGAGGGGCATCTTGGGGTAGGCAGGAGGCTGGGGTCACTCACTGTACTGTAGTGATGTGGCTAGGAGGTGTTCACAAGCCCAGGGGGCCAGGATATCTAGTAAAGAAGGGTTTCCTAAGTAAGTCC

CircID chr1:160214445|160214714
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MLDTTKKGRHGSAVLIYIYVEYICTHS
Nucleotide Sequence ATGCTAGACACCACAAAAAAGGGCAGACATGGCAGTGCAGTTTTAATATACATATATGTAGAATATATATGTACACACAGTTAG

CircID chr1:160214445|160214714
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MYCSDVARRCSQAQGARISSKEGFPK
Nucleotide Sequence CTGTACTGTAGTGATGTGGCTAGGAGGTGTTCACAAGCCCAGGGGGCCAGGATATCTAGTAAAGAAGGGTTTCCTAAGTAA

CircID chr1:160214445|160214714
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MCVHIYSTYMYIKTALPCLPFFVVSSINLLSRPERGWEGNAT
Nucleotide Sequence CTGTGTGTACATATATATTCTACATATATGTATATTAAAACTGCACTGCCATGTCTGCCCTTTTTTGTGGTGTCTAGCATTAACTTATTGTCTAGGCCAGAGCGGGGGTGGGAGGGGAATGCCACA

CircID chr1:160214445|160214714
ORF Type ORF5
Protein Length 28
Nucleotide Length 84
Protein Sequence MHCHVCPFLWCLALTYCLGQSGGGRGMP
Nucleotide Sequence CTGCACTGCCATGTCTGCCCTTTTTTGTGGTGTCTAGCATTAACTTATTGTCTAGGCCAGAGCGGGGGTGGGAGGGGAATGCCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites