CircRNA Information

General Information
circRNA Basic Information
CircID chr1:161102081|161102335
Strand -
CircType exon
Host Gene ENSG00000143256.4;
Algorism CIRI2;
Sequence CTCTTTGACAGTTCGCTCCACCAGCACTCCTCCAACCATGCGGTAGCACTTACGAGTTTCATCTACCTCCTTCAGTGTATCGATCACTAGGCTGGGATAGGAGAACAAGGCAGGACCTGAGGATTCAGCCCCACTCTACTACAAATCCCCCTCACGGAGTAGCCCACACAACTGTCCTACTGTTTGCCTCTCCCTGACTTTCTCACCTGTGCTCATTCAACTCCATCTCCAACTCAGCTGCTTTGGATGCCAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:161102081|161102335 hsa-let-7b-5p 0 0 1
chr1:161102081|161102335 hsa-let-7b-3p 0 0 1
chr1:161102081|161102335 hsa-let-7c-5p 0 0 1
chr1:161102081|161102335 hsa-let-7c-3p 0 0 1
chr1:161102081|161102335 hsa-let-7d-5p 0 0 1
chr1:161102081|161102335 hsa-let-7d-3p 0 0 1
chr1:161102081|161102335 hsa-let-7e-5p 0 0 1
chr1:161102081|161102335 hsa-let-7e-3p 0 0 1
chr1:161102081|161102335 hsa-miR-98-5p 0 0 1
chr1:161102081|161102335 hsa-miR-98-3p 0 0 1
chr1:161102081|161102335 hsa-let-7g-5p 0 0 1
chr1:161102081|161102335 hsa-let-7g-3p 0 0 1
chr1:161102081|161102335 hsa-let-7i-5p 0 0 1
chr1:161102081|161102335 hsa-let-7i-3p 0 0 1
chr1:161102081|161102335 hsa-miR-302a-5p 0 0 1
chr1:161102081|161102335 hsa-miR-302a-3p 0 0 1
chr1:161102081|161102335 hsa-miR-302b-5p 0 0 1
chr1:161102081|161102335 hsa-miR-302b-3p 0 0 1
chr1:161102081|161102335 hsa-miR-302c-5p 0 0 1
chr1:161102081|161102335 hsa-miR-302c-3p 0 0 1
chr1:161102081|161102335 hsa-miR-302d-5p 0 0 1
chr1:161102081|161102335 hsa-miR-302d-3p 0 0 1
chr1:161102081|161102335 hsa-miR-372-5p 0 0 1
chr1:161102081|161102335 hsa-miR-372-3p 0 0 1
chr1:161102081|161102335 hsa-miR-373-5p 0 0 1
chr1:161102081|161102335 hsa-miR-373-3p 0 0 1
chr1:161102081|161102335 hsa-miR-520e-5p 0 0 1
chr1:161102081|161102335 hsa-miR-520e-3p 0 0 1
chr1:161102081|161102335 hsa-miR-520b-5p 0 0 1
chr1:161102081|161102335 hsa-miR-520b-3p 0 0 1
chr1:161102081|161102335 hsa-miR-539-5p 0 0 1
chr1:161102081|161102335 hsa-miR-539-3p 0 0 1
chr1:161102081|161102335 hsa-miR-552-5p 0 0 1
chr1:161102081|161102335 hsa-miR-552-3p 0 0 1
chr1:161102081|161102335 hsa-miR-571 0 1 1
chr1:161102081|161102335 hsa-miR-620 0 0 1
chr1:161102081|161102335 hsa-miR-646 0 1 1
chr1:161102081|161102335 hsa-miR-411-5p 0 0 1
chr1:161102081|161102335 hsa-miR-411-3p 0 0 1
chr1:161102081|161102335 hsa-miR-765 0 0 1
chr1:161102081|161102335 hsa-miR-1270 0 0 1
chr1:161102081|161102335 hsa-miR-302e 0 0 1
chr1:161102081|161102335 hsa-miR-1252-5p 0 0 1
chr1:161102081|161102335 hsa-miR-1252-3p 0 0 1
chr1:161102081|161102335 hsa-miR-1197 0 0 1
chr1:161102081|161102335 hsa-miR-125a-3p 1 1 1
chr1:161102081|161102335 hsa-miR-512-3p 0 0 1
chr1:161102081|161102335 hsa-miR-423-5p 0 1 1
chr1:161102081|161102335 hsa-miR-330-3p 0 0 1
chr1:161102081|161102335 hsa-miR-520d-3p 0 1 1
chr1:161102081|161102335 hsa-miR-519b-3p 0 0 1
chr1:161102081|161102335 hsa-miR-519c-3p 0 0 1
chr1:161102081|161102335 hsa-miR-520a-3p 0 0 1
chr1:161102081|161102335 hsa-miR-520c-3p 0 0 1
chr1:161102081|161102335 hsa-miR-369-5p 0 0 1
chr1:161102081|161102335 hsa-miR-644 0 0 1
chr1:161102081|161102335 hsa-miR-138 0 0 1
chr1:161102081|161102335 hsa-let-7a 0 0 1
chr1:161102081|161102335 hsa-let-7f 0 0 1
chr1:161102081|161102335 hsa-miR-768-5p 0 0 1
chr1:161102081|161102335 hsa-miR-147 0 0 1
chr1:161102081|161102335 hsa-miR-219-1-3p 0 0 1
chr1:161102081|161102335 hsa-miR-1245 0 0 1
chr1:161102081|161102335 hsa-miR-519a 0 0 1
chr1:161102081|161102335 hsa-miR-663a 1 0 0
chr1:161102081|161102335 hsa-miR-762 1 0 0
chr1:161102081|161102335 hsa-miR-1183 1 0 0
chr1:161102081|161102335 hsa-miR-1255a 1 0 0
chr1:161102081|161102335 hsa-miR-1275 1 0 0
chr1:161102081|161102335 hsa-miR-3125 1 0 0
chr1:161102081|161102335 hsa-miR-3132 1 0 0
chr1:161102081|161102335 hsa-miR-3175 1 0 0
chr1:161102081|161102335 hsa-miR-320e 1 0 0
chr1:161102081|161102335 hsa-miR-4298 1 0 0
chr1:161102081|161102335 hsa-miR-4312 0 1 0
chr1:161102081|161102335 hsa-miR-4322 1 1 0
chr1:161102081|161102335 hsa-miR-4265 0 1 0
chr1:161102081|161102335 hsa-miR-4270 1 0 0
chr1:161102081|161102335 hsa-miR-4450 1 1 0
chr1:161102081|161102335 hsa-miR-4458 0 1 0
chr1:161102081|161102335 hsa-miR-4510 1 0 0
chr1:161102081|161102335 hsa-miR-4516 1 0 0
chr1:161102081|161102335 hsa-miR-1587 1 0 0
chr1:161102081|161102335 hsa-miR-4656 1 0 0
chr1:161102081|161102335 hsa-miR-4660 1 0 0
chr1:161102081|161102335 hsa-miR-4688 1 0 0
chr1:161102081|161102335 hsa-miR-4706 1 0 0
chr1:161102081|161102335 hsa-miR-4739 1 0 0
chr1:161102081|161102335 hsa-miR-4741 1 0 0
chr1:161102081|161102335 hsa-miR-4784 1 0 0
chr1:161102081|161102335 hsa-miR-5047 1 0 0
chr1:161102081|161102335 hsa-miR-5194 1 0 0
chr1:161102081|161102335 hsa-miR-5698 1 0 0
chr1:161102081|161102335 hsa-miR-6085 1 0 0
chr1:161102081|161102335 hsa-miR-6088 1 0 0
chr1:161102081|161102335 hsa-miR-6127 1 0 0
chr1:161102081|161102335 hsa-miR-6133 1 0 0
chr1:161102081|161102335 hsa-miR-8073 0 1 0
chr1:161102081|161102335 hsa-miR-8077 0 1 0
chr1:161102081|161102335 hsa-miR-8079 0 1 0
chr1:161102081|161102335 hsa-miR-8085 1 1 0
chr1:161102081|161102335 hsa-miR-12118 0 1 0
chr1:161102081|161102335 hsa-miR-12119 1 0 0
chr1:161102081|161102335 hsa-miR-12128 1 1 0
chr1:161102081|161102335 hsa-miR-138-5p 1 1 0
chr1:161102081|161102335 hsa-miR-4433b-3p 1 1 0
chr1:161102081|161102335 hsa-miR-6734-5p 1 1 0
chr1:161102081|161102335 hsa-miR-504-3p 0 1 0
chr1:161102081|161102335 hsa-miR-6747-3p 0 1 0
chr1:161102081|161102335 hsa-miR-4433a-3p 1 0 0
chr1:161102081|161102335 hsa-miR-6857-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6510-5p 1 0 0
chr1:161102081|161102335 hsa-miR-3692-5p 1 0 0
chr1:161102081|161102335 hsa-miR-8071 1 0 0
chr1:161102081|161102335 hsa-miR-3192-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6880-5p 1 1 0
chr1:161102081|161102335 hsa-miR-1301-3p 1 0 0
chr1:161102081|161102335 hsa-miR-6820-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6741-5p 1 0 0
chr1:161102081|161102335 hsa-miR-197-5p 1 0 0
chr1:161102081|161102335 hsa-miR-8069 1 0 0
chr1:161102081|161102335 hsa-miR-6742-5p 1 0 0
chr1:161102081|161102335 hsa-miR-3151-5p 1 0 0
chr1:161102081|161102335 hsa-miR-3180-3p 1 0 0
chr1:161102081|161102335 hsa-miR-6748-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6793-5p 1 0 0
chr1:161102081|161102335 hsa-miR-185-3p 1 1 0
chr1:161102081|161102335 hsa-miR-6829-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6732-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6805-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6798-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6760-5p 1 1 0
chr1:161102081|161102335 hsa-miR-6810-5p 1 0 0
chr1:161102081|161102335 hsa-miR-30b-3p 1 0 0
chr1:161102081|161102335 hsa-miR-6786-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6835-5p 1 0 0
chr1:161102081|161102335 hsa-miR-7109-5p 1 0 0
chr1:161102081|161102335 hsa-miR-1226-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6740-5p 1 0 0
chr1:161102081|161102335 hsa-miR-3944-3p 1 0 0
chr1:161102081|161102335 hsa-miR-5187-3p 0 1 0
chr1:161102081|161102335 hsa-miR-1229-5p 1 0 0
chr1:161102081|161102335 hsa-miR-885-3p 1 0 0
chr1:161102081|161102335 hsa-miR-296-3p 1 0 0
chr1:161102081|161102335 hsa-miR-6823-5p 1 0 0
chr1:161102081|161102335 hsa-miR-4713-3p 1 0 0
chr1:161102081|161102335 hsa-miR-6834-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6739-3p 0 1 0
chr1:161102081|161102335 hsa-miR-149-3p 1 0 0
chr1:161102081|161102335 hsa-miR-937-5p 1 0 0
chr1:161102081|161102335 hsa-miR-3162-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6800-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6886-5p 1 0 0
chr1:161102081|161102335 hsa-miR-194-3p 1 1 0
chr1:161102081|161102335 hsa-miR-7113-5p 1 0 0
chr1:161102081|161102335 hsa-miR-1296-3p 0 1 0
chr1:161102081|161102335 hsa-miR-6780b-3p 0 1 0
chr1:161102081|161102335 hsa-miR-7158-5p 1 1 0
chr1:161102081|161102335 hsa-miR-221-5p 0 1 0
chr1:161102081|161102335 hsa-miR-1207-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6870-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6893-5p 1 0 0
chr1:161102081|161102335 hsa-miR-1343-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6743-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6752-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6754-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6756-5p 1 1 0
chr1:161102081|161102335 hsa-miR-6803-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6813-5p 1 1 0
chr1:161102081|161102335 hsa-miR-6851-5p 1 0 0
chr1:161102081|161102335 hsa-miR-10401-5p 1 0 0
chr1:161102081|161102335 hsa-miR-11181-3p 1 0 0
chr1:161102081|161102335 hsa-miR-1249-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6751-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6763-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6779-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6780a-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6808-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6879-5p 1 0 0
chr1:161102081|161102335 hsa-miR-7111-5p 1 0 0
chr1:161102081|161102335 hsa-miR-3620-5p 1 0 0
chr1:161102081|161102335 hsa-miR-5189-5p 1 0 0
chr1:161102081|161102335 hsa-miR-328-5p 1 0 0
chr1:161102081|161102335 hsa-miR-3689a-3p 1 0 0
chr1:161102081|161102335 hsa-miR-4632-5p 1 0 0
chr1:161102081|161102335 hsa-miR-4649-5p 1 0 0
chr1:161102081|161102335 hsa-miR-4745-5p 1 1 0
chr1:161102081|161102335 hsa-miR-6777-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6794-5p 1 1 0
chr1:161102081|161102335 hsa-miR-6795-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6846-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6858-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6887-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6889-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6831-5p 1 0 0
chr1:161102081|161102335 hsa-miR-4758-5p 1 0 0
chr1:161102081|161102335 hsa-miR-30c-1-3p 1 0 0
chr1:161102081|161102335 hsa-miR-4665-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6855-5p 1 0 0
chr1:161102081|161102335 hsa-miR-4700-5p 1 0 0
chr1:161102081|161102335 hsa-miR-6891-5p 1 1 0
chr1:161102081|161102335 hsa-miR-4716-3p 0 1 0
chr1:161102081|161102335 hsa-miR-3184-5p 1 0 0
chr1:161102081|161102335 hsa-miR-3928-5p 1 1 0
chr1:161102081|161102335 hsa-miR-6884-5p 1 0 0
chr1:161102081|161102335 hsa-miR-1255b-5p 1 0 0
chr1:161102081|161102335 hsa-miR-3927-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:161102081|161102335
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MSYCLPLPDFLTCAHSTPSPTQLLWMPG
Nucleotide Sequence CTGTCCTACTGTTTGCCTCTCCCTGACTTTCTCACCTGTGCTCATTCAACTCCATCTCCAACTCAGCTGCTTTGGATGCCAGGC
CircID chr1:161102081|161102335
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MRIQPHSTTNPPHGVAHTTVLLFASP
Nucleotide Sequence CTGAGGATTCAGCCCCACTCTACTACAAATCCCCCTCACGGAGTAGCCCACACAACTGTCCTACTGTTTGCCTCTCCCTGA
CircID chr1:161102081|161102335
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MSTGEKVRERQTVGQLCGLLREGDL
Nucleotide Sequence ATGAGCACAGGTGAGAAAGTCAGGGAGAGGCAAACAGTAGGACAGTTGTGTGGGCTACTCCGTGAGGGGGATTTGTAG
CircID chr1:161102081|161102335
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MFSYPSLVIDTLKEVDETRKCYRMVGGVLVERTVKE
Nucleotide Sequence TTGTTCTCCTATCCCAGCCTAGTGATCGATACACTGAAGGAGGTAGATGAAACTCGTAAGTGCTACCGCATGGTTGGAGGAGTGCTGGTGGAGCGAACTGTCAAAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab