CircRNA Information

General Information
circRNA Basic Information
CircID chr1:161165043|161165417
Strand -
CircType exon
Host Gene ENSG00000143258.14;
Algorism CIRI2;
Sequence CAGCTGTATGCCCTTTGCAACCACTCAGGCAGCGTCCACTATGGCCACTACACAGCCCTGTGCCGGTGCCAGACTGGTTGGCATGTCTACAATGACTCTCGGTGAGAATAGCCTCCTATTTACATCCTGCCCCATTCCCACTCAGCCCTGACACCCTCCCCTTCTATGAAGCTCCAGGAGAGCAGAGTGCCAGGTGAAAGGAGAGGTGGAGGTCTTGCCTGATCATTTCCTGGATGCTCTGAGGTTCGGTCTTGTAGGGAGAAGGGAGTAAACAGGAATGACCACAACCCTTTCCCGATCTCCTTTTTTCCTAGTGTCTCCCCTGTCAGTGAAAACCAGGTGGCATCCAGCGAGGGCTACGTGCTGTTCTACCAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:161165043|161165417 hsa-miR-31-5p 0 0 1
chr1:161165043|161165417 hsa-miR-31-3p 0 0 1
chr1:161165043|161165417 hsa-miR-379-5p 0 0 1
chr1:161165043|161165417 hsa-miR-379-3p 0 0 1
chr1:161165043|161165417 hsa-miR-383-5p 0 0 1
chr1:161165043|161165417 hsa-miR-383-3p 0 0 1
chr1:161165043|161165417 hsa-miR-376b-5p 0 0 1
chr1:161165043|161165417 hsa-miR-376b-3p 0 0 1
chr1:161165043|161165417 hsa-miR-527 0 1 1
chr1:161165043|161165417 hsa-miR-616-5p 0 0 1
chr1:161165043|161165417 hsa-miR-616-3p 0 0 1
chr1:161165043|161165417 hsa-miR-622 0 0 1
chr1:161165043|161165417 hsa-miR-665 0 0 1
chr1:161165043|161165417 hsa-miR-1229-5p 0 0 1
chr1:161165043|161165417 hsa-miR-1229-3p 0 0 1
chr1:161165043|161165417 hsa-miR-1287-5p 0 0 1
chr1:161165043|161165417 hsa-miR-1287-3p 0 0 1
chr1:161165043|161165417 hsa-miR-1265 0 0 1
chr1:161165043|161165417 hsa-miR-140-5p 0 0 1
chr1:161165043|161165417 hsa-miR-486-3p 0 0 1
chr1:161165043|161165417 hsa-miR-296-3p 1 1 1
chr1:161165043|161165417 hsa-miR-767-3p 0 0 1
chr1:161165043|161165417 hsa-miR-518a-5p 0 1 1
chr1:161165043|161165417 hsa-miR-142-3p 0 0 1
chr1:161165043|161165417 hsa-miR-220c 0 0 1
chr1:161165043|161165417 hsa-miR-129-3p 0 0 1
chr1:161165043|161165417 hsa-miR-720 0 0 1
chr1:161165043|161165417 hsa-miR-376a 0 0 1
chr1:161165043|161165417 hsa-miR-1201 0 0 1
chr1:161165043|161165417 hsa-miR-608 1 0 0
chr1:161165043|161165417 hsa-miR-638 1 1 0
chr1:161165043|161165417 hsa-miR-762 1 0 0
chr1:161165043|161165417 hsa-miR-940 1 1 0
chr1:161165043|161165417 hsa-miR-663b 1 0 0
chr1:161165043|161165417 hsa-miR-1268a 1 0 0
chr1:161165043|161165417 hsa-miR-2278 1 0 0
chr1:161165043|161165417 hsa-miR-3141 1 0 0
chr1:161165043|161165417 hsa-miR-3153 0 1 0
chr1:161165043|161165417 hsa-miR-3154 1 1 0
chr1:161165043|161165417 hsa-miR-378c 1 0 0
chr1:161165043|161165417 hsa-miR-4298 1 0 0
chr1:161165043|161165417 hsa-miR-4254 0 1 0
chr1:161165043|161165417 hsa-miR-3660 0 1 0
chr1:161165043|161165417 hsa-miR-1268b 1 0 0
chr1:161165043|161165417 hsa-miR-4428 0 1 0
chr1:161165043|161165417 hsa-miR-4469 1 0 0
chr1:161165043|161165417 hsa-miR-4498 1 0 0
chr1:161165043|161165417 hsa-miR-4505 1 0 0
chr1:161165043|161165417 hsa-miR-4516 1 0 0
chr1:161165043|161165417 hsa-miR-4651 1 0 0
chr1:161165043|161165417 hsa-miR-4654 1 0 0
chr1:161165043|161165417 hsa-miR-4656 1 1 0
chr1:161165043|161165417 hsa-miR-4669 1 0 0
chr1:161165043|161165417 hsa-miR-4675 0 1 0
chr1:161165043|161165417 hsa-miR-4706 1 0 0
chr1:161165043|161165417 hsa-miR-4741 1 1 0
chr1:161165043|161165417 hsa-miR-5090 1 0 0
chr1:161165043|161165417 hsa-miR-5093 0 1 0
chr1:161165043|161165417 hsa-miR-5681a 0 1 0
chr1:161165043|161165417 hsa-miR-5787 1 0 0
chr1:161165043|161165417 hsa-miR-6077 1 0 0
chr1:161165043|161165417 hsa-miR-6085 1 0 0
chr1:161165043|161165417 hsa-miR-6127 1 0 0
chr1:161165043|161165417 hsa-miR-6132 1 1 0
chr1:161165043|161165417 hsa-miR-8077 1 1 0
chr1:161165043|161165417 hsa-miR-29b-1-5p 0 1 0
chr1:161165043|161165417 hsa-miR-4433b-3p 1 0 0
chr1:161165043|161165417 hsa-miR-128-1-5p 1 0 0
chr1:161165043|161165417 hsa-miR-15a-3p 0 1 0
chr1:161165043|161165417 hsa-miR-6734-5p 1 0 0
chr1:161165043|161165417 hsa-miR-4700-3p 1 0 0
chr1:161165043|161165417 hsa-miR-6747-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6861-5p 1 0 0
chr1:161165043|161165417 hsa-miR-7106-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6825-5p 1 1 0
chr1:161165043|161165417 hsa-miR-6857-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6799-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6510-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6804-5p 1 1 0
chr1:161165043|161165417 hsa-miR-6089 1 0 0
chr1:161165043|161165417 hsa-miR-6757-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6746-5p 1 0 0
chr1:161165043|161165417 hsa-miR-3677-5p 0 1 0
chr1:161165043|161165417 hsa-miR-6890-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6875-3p 1 0 0
chr1:161165043|161165417 hsa-miR-6727-5p 1 0 0
chr1:161165043|161165417 hsa-miR-3187-3p 0 1 0
chr1:161165043|161165417 hsa-miR-6721-5p 1 1 0
chr1:161165043|161165417 hsa-miR-197-5p 1 0 0
chr1:161165043|161165417 hsa-miR-8069 1 0 0
chr1:161165043|161165417 hsa-miR-432-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6716-5p 1 1 0
chr1:161165043|161165417 hsa-miR-6871-5p 1 0 0
chr1:161165043|161165417 hsa-miR-1292-5p 1 0 0
chr1:161165043|161165417 hsa-miR-3180-3p 1 0 0
chr1:161165043|161165417 hsa-miR-6748-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6772-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6829-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6732-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6798-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6782-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6765-3p 0 1 0
chr1:161165043|161165417 hsa-miR-6728-3p 0 1 0
chr1:161165043|161165417 hsa-miR-6888-5p 0 1 0
chr1:161165043|161165417 hsa-miR-4436b-5p 0 1 0
chr1:161165043|161165417 hsa-miR-5088-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6784-5p 1 0 0
chr1:161165043|161165417 hsa-miR-885-3p 1 0 0
chr1:161165043|161165417 hsa-miR-4764-5p 0 1 0
chr1:161165043|161165417 hsa-miR-3127-5p 1 1 0
chr1:161165043|161165417 hsa-miR-7113-3p 1 0 0
chr1:161165043|161165417 hsa-miR-1228-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6823-5p 1 1 0
chr1:161165043|161165417 hsa-miR-6749-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6821-3p 1 0 0
chr1:161165043|161165417 hsa-miR-4743-5p 1 0 0
chr1:161165043|161165417 hsa-miR-4787-5p 1 0 0
chr1:161165043|161165417 hsa-miR-4446-3p 1 1 0
chr1:161165043|161165417 hsa-miR-149-3p 1 1 0
chr1:161165043|161165417 hsa-miR-6824-5p 1 0 0
chr1:161165043|161165417 hsa-miR-664b-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6828-3p 0 1 0
chr1:161165043|161165417 hsa-miR-629-3p 0 1 0
chr1:161165043|161165417 hsa-miR-4727-3p 1 1 0
chr1:161165043|161165417 hsa-miR-5088-3p 1 1 0
chr1:161165043|161165417 hsa-miR-5189-3p 0 1 0
chr1:161165043|161165417 hsa-miR-2277-5p 1 0 0
chr1:161165043|161165417 hsa-miR-3675-5p 0 1 0
chr1:161165043|161165417 hsa-miR-4704-5p 0 1 0
chr1:161165043|161165417 hsa-miR-4772-5p 0 1 0
chr1:161165043|161165417 hsa-miR-6800-3p 0 1 0
chr1:161165043|161165417 hsa-miR-652-3p 1 0 0
chr1:161165043|161165417 hsa-miR-1207-5p 1 1 0
chr1:161165043|161165417 hsa-miR-1233-5p 1 0 0
chr1:161165043|161165417 hsa-miR-4763-3p 1 0 0
chr1:161165043|161165417 hsa-miR-6778-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6816-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6870-5p 1 0 0
chr1:161165043|161165417 hsa-miR-1343-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6743-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6752-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6756-5p 1 1 0
chr1:161165043|161165417 hsa-miR-6803-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6813-5p 1 0 0
chr1:161165043|161165417 hsa-miR-7110-5p 1 0 0
chr1:161165043|161165417 hsa-miR-10401-5p 1 0 0
chr1:161165043|161165417 hsa-miR-1249-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6751-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6779-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6797-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6879-5p 1 0 0
chr1:161165043|161165417 hsa-miR-4685-3p 0 1 0
chr1:161165043|161165417 hsa-miR-6754-3p 1 0 0
chr1:161165043|161165417 hsa-miR-5196-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6780b-5p 1 0 0
chr1:161165043|161165417 hsa-miR-328-5p 1 0 0
chr1:161165043|161165417 hsa-miR-4649-5p 1 0 0
chr1:161165043|161165417 hsa-miR-4685-5p 1 1 0
chr1:161165043|161165417 hsa-miR-4725-3p 1 0 0
chr1:161165043|161165417 hsa-miR-4745-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6729-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6795-5p 1 1 0
chr1:161165043|161165417 hsa-miR-6846-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6848-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6883-5p 1 1 0
chr1:161165043|161165417 hsa-miR-6887-5p 1 1 0
chr1:161165043|161165417 hsa-miR-4723-5p 0 1 0
chr1:161165043|161165417 hsa-miR-939-5p 1 0 0
chr1:161165043|161165417 hsa-miR-1238-5p 1 1 0
chr1:161165043|161165417 hsa-miR-4758-5p 1 1 0
chr1:161165043|161165417 hsa-miR-1266-5p 1 1 0
chr1:161165043|161165417 hsa-miR-6731-5p 1 0 0
chr1:161165043|161165417 hsa-miR-4700-5p 1 0 0
chr1:161165043|161165417 hsa-miR-4747-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6891-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6766-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6785-5p 1 1 0
chr1:161165043|161165417 hsa-miR-6790-5p 1 0 0
chr1:161165043|161165417 hsa-miR-6791-5p 1 0 0
chr1:161165043|161165417 hsa-miR-9851-3p 1 0 0
chr1:161165043|161165417 hsa-miR-130a-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:161165043|161165417
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MYALCNHSGSVHYGHYTALCRCQTGWHVYNDSR
Nucleotide Sequence CTGTATGCCCTTTGCAACCACTCAGGCAGCGTCCACTATGGCCACTACACAGCCCTGTGCCGGTGCCAGACTGGTTGGCATGTCTACAATGACTCTCGGTGA
CircID chr1:161165043|161165417
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MPHSHSALTPSPSMKLQESRVPGERRGGGLA
Nucleotide Sequence CTGCCCCATTCCCACTCAGCCCTGACACCCTCCCCTTCTATGAAGCTCCAGGAGAGCAGAGTGCCAGGTGAAAGGAGAGGTGGAGGTCTTGCCTGA
CircID chr1:161165043|161165417
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MPFATTQAASTMATTQPCAGARLVGMSTMTLGENSLLFTSCPIPTQP
Nucleotide Sequence ATGCCCTTTGCAACCACTCAGGCAGCGTCCACTATGGCCACTACACAGCCCTGTGCCGGTGCCAGACTGGTTGGCATGTCTACAATGACTCTCGGTGAGAATAGCCTCCTATTTACATCCTGCCCCATTCCCACTCAGCCCTGA
CircID chr1:161165043|161165417
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MTTTLSRSPFFLVSPLSVKTRWHPARATCCST
Nucleotide Sequence ATGACCACAACCCTTTCCCGATCTCCTTTTTTCCTAGTGTCTCCCCTGTCAGTGAAAACCAGGTGGCATCCAGCGAGGGCTACGTGCTGTTCTACC
CircID chr1:161165043|161165417
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MQPLRQRPLWPLHSPVPVPDWLACLQ
Nucleotide Sequence TTGCAACCACTCAGGCAGCGTCCACTATGGCCACTACACAGCCCTGTGCCGGTGCCAGACTGGTTGGCATGTCTACAATGA
CircID chr1:161165043|161165417
ORF Type ORF6
Protein Length 50
Nucleotide Length 153
Protein Sequence LVEQHVALAGCHLVFTDRGDTRKKGDRERVVVIPVYSLLPTRPNLRASRK
Nucleotide Sequence TTGGTAGAACAGCACGTAGCCCTCGCTGGATGCCACCTGGTTTTCACTGACAGGGGAGACACTAGGAAAAAAGGAGATCGGGAAAGGGTTGTGGTCATTCCTGTTTACTCCCTTCTCCCTACAAGACCGAACCTCAGAGCATCCAGGAAATGA
CircID chr1:161165043|161165417
ORF Type ORF7
Protein Length 36
Nucleotide Length 111
Protein Sequence MGQDVNRRLFSPRVIVDMPTSLAPAQGCVVAIVDAA
Nucleotide Sequence ATGGGGCAGGATGTAAATAGGAGGCTATTCTCACCGAGAGTCATTGTAGACATGCCAACCAGTCTGGCACCGGCACAGGGCTGTGTAGTGGCCATAGTGGACGCTGCCTGA
CircID chr1:161165043|161165417
ORF Type ORF8
Protein Length 76
Nucleotide Length 231
Protein Sequence MDATWFSLTGETLGKKEIGKGLWSFLFTPFSLQDRTSEHPGNDQARPPPLLSPGTLLSWSFIEGEGVRAEWEWGRM
Nucleotide Sequence CTGGATGCCACCTGGTTTTCACTGACAGGGGAGACACTAGGAAAAAAGGAGATCGGGAAAGGGTTGTGGTCATTCCTGTTTACTCCCTTCTCCCTACAAGACCGAACCTCAGAGCATCCAGGAAATGATCAGGCAAGACCTCCACCTCTCCTTTCACCTGGCACTCTGCTCTCCTGGAGCTTCATAGAAGGGGAGGGTGTCAGGGCTGAGTGGGAATGGGGCAGGATGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab