CircRNA Information

General Information
circRNA Basic Information
CircID chr1:161173605|161173977
Strand -
CircType exon
Host Gene ENSG00000158850.13;
Algorism CIRI2;
Sequence CTGGTAGCAATGTCGTCATCCTCACCACCCCAGCCCCAGTATTCATTGGGGAAGCCATTCATCTTCAGGTACTGGTCAGGAGTAAGTGCTGAGACTCCTCCGAAGTACTGGGGGTACGGGAGGCTAGGGAGAGAAAGATCCTTGCATACCCCGAGTCTTCTGGGGACACATCCCCAACCACAATCCGCTTGGCTCTCCTCCTTCCACAGGATAGTAGGCTTCCCTGTTTCCCAGTACCCTTCCATGCCCTCTACCTGTATCCAAACTTGTTCATAGCAACGGCAACATGGCGGGGTCCCCGGGGGTCACACACATACAGATTGTGGTCATTTTCTGGCAAGAGGTCCACATCGTGCAAGAACAGGCAGTCCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:161173605|161173977 hsa-miR-200b-5p 0 0 1
chr1:161173605|161173977 hsa-miR-200b-3p 0 0 1
chr1:161173605|161173977 hsa-miR-200c-5p 0 0 1
chr1:161173605|161173977 hsa-miR-200c-3p 0 0 1
chr1:161173605|161173977 hsa-miR-135b-5p 0 0 1
chr1:161173605|161173977 hsa-miR-135b-3p 0 0 1
chr1:161173605|161173977 hsa-miR-429 3 0 1
chr1:161173605|161173977 hsa-miR-492 -6 0 1
chr1:161173605|161173977 hsa-miR-552-5p 0 0 1
chr1:161173605|161173977 hsa-miR-552-3p 0 0 1
chr1:161173605|161173977 hsa-miR-567 -7 0 1
chr1:161173605|161173977 hsa-miR-608 -26 1 1
chr1:161173605|161173977 hsa-miR-765 -13 1 1
chr1:161173605|161173977 hsa-miR-297 -7 0 1
chr1:161173605|161173977 hsa-miR-1202 -8 0 1
chr1:161173605|161173977 hsa-miR-1293 -16 1 1
chr1:161173605|161173977 hsa-miR-1261 -7 0 1
chr1:161173605|161173977 hsa-miR-1288-5p 0 0 1
chr1:161173605|161173977 hsa-miR-1288-3p 0 0 1
chr1:161173605|161173977 hsa-miR-671-5p -15 0 1
chr1:161173605|161173977 hsa-miR-770-5p -11 1 1
chr1:161173605|161173977 hsa-miR-361-3p -5 0 1
chr1:161173605|161173977 hsa-miR-342-5p -10 0 1
chr1:161173605|161173977 hsa-miR-135a 0 0 1
chr1:161173605|161173977 hsa-miR-1185 0 0 1
chr1:161173605|161173977 hsa-miR-557 -17 1 0
chr1:161173605|161173977 hsa-miR-762 -16 1 0
chr1:161173605|161173977 hsa-miR-4294 -8 1 0
chr1:161173605|161173977 hsa-miR-4261 -12 1 0
chr1:161173605|161173977 hsa-miR-4491 -15 1 0
chr1:161173605|161173977 hsa-miR-4505 -15 1 0
chr1:161173605|161173977 hsa-miR-4533 -19 1 0
chr1:161173605|161173977 hsa-miR-4651 -22 1 0
chr1:161173605|161173977 hsa-miR-4739 -26 1 0
chr1:161173605|161173977 hsa-miR-5572 -17 1 0
chr1:161173605|161173977 hsa-miR-5698 -21 1 0
chr1:161173605|161173977 hsa-miR-5787 -18 1 0
chr1:161173605|161173977 hsa-miR-12118 -14 1 0
chr1:161173605|161173977 hsa-miR-26b-3p -5 1 0
chr1:161173605|161173977 hsa-miR-432-3p -9 1 0
chr1:161173605|161173977 hsa-miR-7155-5p -12 1 0
chr1:161173605|161173977 hsa-miR-6833-5p -11 1 0
chr1:161173605|161173977 hsa-miR-7114-5p -12 1 0
chr1:161173605|161173977 hsa-miR-6515-5p -19 1 0
chr1:161173605|161173977 hsa-miR-7847-3p -14 1 0
chr1:161173605|161173977 hsa-miR-3622b-5p -18 1 0
chr1:161173605|161173977 hsa-miR-3605-5p -10 1 0
chr1:161173605|161173977 hsa-miR-3190-3p -17 1 0
chr1:161173605|161173977 hsa-miR-6827-5p -14 1 0
chr1:161173605|161173977 hsa-miR-6772-3p -17 1 0
chr1:161173605|161173977 hsa-miR-204-3p -12 1 0
chr1:161173605|161173977 hsa-miR-6514-3p -14 1 0
chr1:161173605|161173977 hsa-miR-7161-3p -14 1 0
chr1:161173605|161173977 hsa-miR-3202 -16 1 0
chr1:161173605|161173977 hsa-miR-1266-3p -11 1 0
chr1:161173605|161173977 hsa-miR-378a-5p -11 1 0
chr1:161173605|161173977 hsa-miR-24-2-5p -4 1 0
chr1:161173605|161173977 hsa-miR-24-1-5p -4 1 0
chr1:161173605|161173977 hsa-miR-6778-3p -2 1 0
chr1:161173605|161173977 hsa-miR-383-3p -16 1 0
chr1:161173605|161173977 hsa-miR-2355-5p -4 1 0
chr1:161173605|161173977 hsa-miR-6808-3p -11 1 0
chr1:161173605|161173977 hsa-miR-6778-5p -20 1 0
chr1:161173605|161173977 hsa-miR-6812-5p -20 1 0
chr1:161173605|161173977 hsa-miR-6737-5p -16 1 0
chr1:161173605|161173977 hsa-miR-6752-5p -18 1 0
chr1:161173605|161173977 hsa-miR-6813-5p -19 1 0
chr1:161173605|161173977 hsa-miR-6819-5p -16 1 0
chr1:161173605|161173977 hsa-miR-11181-3p -21 1 0
chr1:161173605|161173977 hsa-miR-1249-5p -26 1 0
chr1:161173605|161173977 hsa-miR-6831-5p -18 1 0
chr1:161173605|161173977 hsa-miR-3199 -16 1 0
chr1:161173605|161173977 hsa-miR-1238-5p -12 1 0
chr1:161173605|161173977 hsa-miR-6731-5p -20 1 0
chr1:161173605|161173977 hsa-miR-4700-5p -17 1 0
chr1:161173605|161173977 hsa-miR-3173-3p -14 1 0
chr1:161173605|161173977 hsa-miR-4646-5p -16 1 0
chr1:161173605|161173977 hsa-miR-6891-5p -15 1 0
chr1:161173605|161173977 hsa-miR-6833-3p -5 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:161173605|161173977
ORF Type ORF1
Protein Length 91
Nucleotide Length 276
Protein Sequence LVAMSSSSPPQPQYSLGKPFIFRYWSGVSAETPPKYWGYGRLGRERSLHTPSLLGTHPQPQSAWLSSFHRIVGFPVSQYPSMPSTCIQTCS
Nucleotide Sequence CTGGTAGCAATGTCGTCATCCTCACCACCCCAGCCCCAGTATTCATTGGGGAAGCCATTCATCTTCAGGTACTGGTCAGGAGTAAGTGCTGAGACTCCTCCGAAGTACTGGGGGTACGGGAGGCTAGGGAGAGAAAGATCCTTGCATACCCCGAGTCTTCTGGGGACACATCCCCAACCACAATCCGCTTGGCTCTCCTCCTTCCACAGGATAGTAGGCTTCCCTGTTTCCCAGTACCCTTCCATGCCCTCTACCTGTATCCAAACTTGTTCATAG
CircID chr1:161173605|161173977
ORF Type ORF2
Protein Length 50
Nucleotide Length 150
Protein Sequence MFPSTLPCPLPVSKLVHSNGNMAGSPGVTHIQIVVIFWQEVHIVQEQAVP
Nucleotide Sequence CTGTTTCCCAGTACCCTTCCATGCCCTCTACCTGTATCCAAACTTGTTCATAGCAACGGCAACATGGCGGGGTCCCCGGGGGTCACACACATACAGATTGTGGTCATTTTCTGGCAAGAGGTCCACATCGTGCAAGAACAGGCAGTCCCA
CircID chr1:161173605|161173977
ORF Type ORF3
Protein Length 88
Nucleotide Length 264
Protein Sequence MGVREARERKILAYPESSGDTSPTTIRLALLLPQDSRLPCFPVPFHALYLYPNLFIATATWRGPRGSHTYRLWSFSGKRSTSCKNRQS
Nucleotide Sequence CTGGGGGTACGGGAGGCTAGGGAGAGAAAGATCCTTGCATACCCCGAGTCTTCTGGGGACACATCCCCAACCACAATCCGCTTGGCTCTCCTCCTTCCACAGGATAGTAGGCTTCCCTGTTTCCCAGTACCCTTCCATGCCCTCTACCTGTATCCAAACTTGTTCATAGCAACGGCAACATGGCGGGGTCCCCGGGGGTCACACACATACAGATTGTGGTCATTTTCTGGCAAGAGGTCCACATCGTGCAAGAACAGGCAGTCC
CircID chr1:161173605|161173977
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MFLHDVDLLPENDHNLYVCDPRGPRHVAVAMNKFGYR
Nucleotide Sequence CTGTTCTTGCACGATGTGGACCTCTTGCCAGAAAATGACCACAATCTGTATGTGTGTGACCCCCGGGGACCCCGCCATGTTGCCGTTGCTATGAACAAGTTTGGATACAGGTAG
CircID chr1:161173605|161173977
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MWTSCQKMTTICMCVTPGDPAMLPLL
Nucleotide Sequence ATGTGGACCTCTTGCCAGAAAATGACCACAATCTGTATGTGTGTGACCCCCGGGGACCCCGCCATGTTGCCGTTGCTATGA
CircID chr1:161173605|161173977
ORF Type ORF6
Protein Length 46
Nucleotide Length 141
Protein Sequence MDTGRGHGRVLGNREAYYPVEGGEPSGLWLGMCPQKTRGMQGSFSP
Nucleotide Sequence TTGGATACAGGTAGAGGGCATGGAAGGGTACTGGGAAACAGGGAAGCCTACTATCCTGTGGAAGGAGGAGAGCCAAGCGGATTGTGGTTGGGGATGTGTCCCCAGAAGACTCGGGGTATGCAAGGATCTTTCTCTCCCTAG
CircID chr1:161173605|161173977
ORF Type ORF7
Protein Length 81
Nucleotide Length 243
Protein Sequence MEGYWETGKPTILWKEESQADCGWGCVPRRLGVCKDLSLPSLPYPQYFGGVSALTPDQYLKMNGFPNEYWGWGGEDDDIAT
Nucleotide Sequence ATGGAAGGGTACTGGGAAACAGGGAAGCCTACTATCCTGTGGAAGGAGGAGAGCCAAGCGGATTGTGGTTGGGGATGTGTCCCCAGAAGACTCGGGGTATGCAAGGATCTTTCTCTCCCTAGCCTCCCGTACCCCCAGTACTTCGGAGGAGTCTCAGCACTTACTCCTGACCAGTACCTGAAGATGAATGGCTTCCCCAATGAATACTGGGGCTGGGGTGGTGAGGATGACGACATTGCTACC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab