CircRNA Information

General Information
circRNA Basic Information
CircID chr1:161209794|161209939
Strand +
CircType exon
Host Gene ENSG00000158864.11;
Algorism CIRI2;
Sequence CTGCTCACCTGGTGCACTCCTCCTGGCCGGATATAAGCAGCATGCATTCGGGCTCCAGACACTCGCTCGTAGAACTCAAACATCTTCATAGAACGTGCTGGGAATTAGTGTCAAAGTCCCAGGCCCCCAGGTCCTATGATGGCCTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:161209794|161209939 hsa-miR-492 0 1 1
chr1:161209794|161209939 hsa-miR-631 0 0 1
chr1:161209794|161209939 hsa-miR-637 1 1 1
chr1:161209794|161209939 hsa-miR-661 1 1 1
chr1:161209794|161209939 hsa-miR-765 0 1 1
chr1:161209794|161209939 hsa-miR-665 0 0 1
chr1:161209794|161209939 hsa-miR-1231 0 0 1
chr1:161209794|161209939 hsa-miR-125a-3p 0 0 1
chr1:161209794|161209939 hsa-miR-767-5p 0 0 1
chr1:161209794|161209939 hsa-miR-514 0 0 1
chr1:161209794|161209939 hsa-miR-516b 0 0 1
chr1:161209794|161209939 hsa-miR-1203 1 0 0
chr1:161209794|161209939 hsa-miR-663b 1 0 0
chr1:161209794|161209939 hsa-miR-3168 0 1 0
chr1:161209794|161209939 hsa-miR-3661 1 1 0
chr1:161209794|161209939 hsa-miR-3135b 1 0 0
chr1:161209794|161209939 hsa-miR-4488 1 0 0
chr1:161209794|161209939 hsa-miR-4682 1 0 0
chr1:161209794|161209939 hsa-miR-4739 1 0 0
chr1:161209794|161209939 hsa-miR-5698 1 0 0
chr1:161209794|161209939 hsa-miR-5704 0 1 0
chr1:161209794|161209939 hsa-miR-5787 1 0 0
chr1:161209794|161209939 hsa-miR-6860 1 0 0
chr1:161209794|161209939 hsa-miR-8089 1 0 0
chr1:161209794|161209939 hsa-miR-4433b-3p 0 1 0
chr1:161209794|161209939 hsa-miR-6894-5p 1 0 0
chr1:161209794|161209939 hsa-miR-1972 1 0 0
chr1:161209794|161209939 hsa-miR-7851-3p 0 1 0
chr1:161209794|161209939 hsa-miR-4695-5p 1 0 0
chr1:161209794|161209939 hsa-miR-4722-5p 1 1 0
chr1:161209794|161209939 hsa-miR-3187-3p 1 0 0
chr1:161209794|161209939 hsa-miR-6852-5p 1 1 0
chr1:161209794|161209939 hsa-miR-4640-5p 1 0 0
chr1:161209794|161209939 hsa-miR-6749-5p 1 0 0
chr1:161209794|161209939 hsa-miR-4743-5p 1 0 0
chr1:161209794|161209939 hsa-miR-4733-3p 0 1 0
chr1:161209794|161209939 hsa-miR-574-5p 1 0 0
chr1:161209794|161209939 hsa-miR-7112-5p 1 0 0
chr1:161209794|161209939 hsa-miR-6850-3p 1 0 0
chr1:161209794|161209939 hsa-miR-1207-5p 1 0 0
chr1:161209794|161209939 hsa-miR-4763-3p 1 0 0
chr1:161209794|161209939 hsa-miR-1343-5p 1 0 0
chr1:161209794|161209939 hsa-miR-6752-5p 1 0 0
chr1:161209794|161209939 hsa-miR-6803-5p 1 0 0
chr1:161209794|161209939 hsa-miR-7107-5p 1 0 0
chr1:161209794|161209939 hsa-miR-7110-5p 1 0 0
chr1:161209794|161209939 hsa-miR-6722-3p 1 0 0
chr1:161209794|161209939 hsa-miR-6763-5p 1 0 0
chr1:161209794|161209939 hsa-miR-1237-5p 1 0 0
chr1:161209794|161209939 hsa-miR-4649-5p 1 0 0
chr1:161209794|161209939 hsa-miR-6794-5p 1 0 0
chr1:161209794|161209939 hsa-miR-6848-5p 1 0 0
chr1:161209794|161209939 hsa-miR-1914-3p 1 0 0
chr1:161209794|161209939 hsa-miR-6724-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:161209794|161209939
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MVHSSWPDISSMHSGSRHSLVELKHLHRTCWELVSKSQAPRSYDGL
Nucleotide Sequence CTGGTGCACTCCTCCTGGCCGGATATAAGCAGCATGCATTCGGGCTCCAGACACTCGCTCGTAGAACTCAAACATCTTCATAGAACGTGCTGGGAATTAGTGTCAAAGTCCCAGGCCCCCAGGTCCTATGATGGCCTA

CircID chr1:161209794|161209939
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MKMFEFYERVSGARMHAAYIRPGGVHQVS
Nucleotide Sequence ATGAAGATGTTTGAGTTCTACGAGCGAGTGTCTGGAGCCCGAATGCATGCTGCTTATATCCGGCCAGGAGGAGTGCACCAGGTGAGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites