CircRNA Information

General Information
circRNA Basic Information
CircID chr1:161209866|161210188
Strand +
CircType exon
Host Gene ENSG00000158864.11;
Algorism CIRI2;
Sequence CTCCTCCAACTCATCAAGCCGAAGAGAGAAGTTCTTAGAAAACTGATAAATGTCATCCATAAGCCCAAGGGGTAGGTCCTAGAAGCCAAACGGAAGTGCTACTGAATGTGGCATAGCCTTCACTAAGGAGAGCCCTCTCAGCACCCCCTCCCCCAGCGATACAGGTTTGGAGTTTCCATCATCCAGCACTGCCCTCCAGTGGCCACAGGGAAAATAGGCCTGGGCTGGACATTTGGGGAAGCCGGGGACCTGCTCACCTGGTGCACTCCTCCTGGCCGGATATAAGCAGCATGCATTCGGGCTCCAGACACTCGCTCGTAGAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:161209866|161210188 hsa-miR-198 0 0 1
chr1:161209866|161210188 hsa-miR-34a-5p 0 0 1
chr1:161209866|161210188 hsa-miR-34a-3p 0 0 1
chr1:161209866|161210188 hsa-miR-181c-5p 0 0 1
chr1:161209866|161210188 hsa-miR-181c-3p 0 0 1
chr1:161209866|161210188 hsa-miR-449a 0 0 1
chr1:161209866|161210188 hsa-miR-181d-5p 0 0 1
chr1:161209866|161210188 hsa-miR-181d-3p 0 0 1
chr1:161209866|161210188 hsa-miR-571 0 0 1
chr1:161209866|161210188 hsa-miR-588 0 0 1
chr1:161209866|161210188 hsa-miR-625-5p 0 0 1
chr1:161209866|161210188 hsa-miR-625-3p 0 0 1
chr1:161209866|161210188 hsa-miR-635 0 0 1
chr1:161209866|161210188 hsa-miR-637 1 0 1
chr1:161209866|161210188 hsa-miR-649 0 0 1
chr1:161209866|161210188 hsa-miR-449b-5p 0 0 1
chr1:161209866|161210188 hsa-miR-449b-3p 0 0 1
chr1:161209866|161210188 hsa-miR-765 0 0 1
chr1:161209866|161210188 hsa-miR-665 0 0 1
chr1:161209866|161210188 hsa-miR-921 0 0 1
chr1:161209866|161210188 hsa-miR-936 0 0 1
chr1:161209866|161210188 hsa-miR-942-5p 0 0 1
chr1:161209866|161210188 hsa-miR-942-3p 0 0 1
chr1:161209866|161210188 hsa-miR-1231 0 0 1
chr1:161209866|161210188 hsa-miR-1236-5p 0 0 1
chr1:161209866|161210188 hsa-miR-1236-3p 0 0 1
chr1:161209866|161210188 hsa-miR-663b 1 0 1
chr1:161209866|161210188 hsa-miR-1287-5p 0 0 1
chr1:161209866|161210188 hsa-miR-1287-3p 0 0 1
chr1:161209866|161210188 hsa-miR-1246 0 0 1
chr1:161209866|161210188 hsa-miR-1255a 0 0 1
chr1:161209866|161210188 hsa-miR-1275 0 0 1
chr1:161209866|161210188 hsa-miR-125a-3p 0 0 1
chr1:161209866|161210188 hsa-miR-512-3p 0 0 1
chr1:161209866|161210188 hsa-miR-767-5p 0 0 1
chr1:161209866|161210188 hsa-miR-361-5p 0 0 1
chr1:161209866|161210188 hsa-miR-339-5p 0 0 1
chr1:161209866|161210188 hsa-miR-576-5p 0 0 1
chr1:161209866|161210188 hsa-miR-199b-3p 0 0 1
chr1:161209866|161210188 hsa-miR-199a-3p 0 0 1
chr1:161209866|161210188 hsa-miR-342-5p 0 0 1
chr1:161209866|161210188 hsa-miR-34c-5p 0 0 1
chr1:161209866|161210188 hsa-miR-548b-3p 0 0 1
chr1:161209866|161210188 hsa-miR-1274a 0 0 1
chr1:161209866|161210188 hsa-miR-1274b 0 0 1
chr1:161209866|161210188 hsa-miR-1255b 0 0 1
chr1:161209866|161210188 hsa-miR-181a 0 0 1
chr1:161209866|161210188 hsa-miR-181b 0 0 1
chr1:161209866|161210188 hsa-miR-516b 0 0 1
chr1:161209866|161210188 hsa-miR-768-5p 0 0 1
chr1:161209866|161210188 hsa-miR-219-1-3p 0 0 1
chr1:161209866|161210188 hsa-miR-608 1 0 0
chr1:161209866|161210188 hsa-miR-1203 1 0 0
chr1:161209866|161210188 hsa-miR-3135b 1 0 0
chr1:161209866|161210188 hsa-miR-4488 1 0 0
chr1:161209866|161210188 hsa-miR-4496 1 0 0
chr1:161209866|161210188 hsa-miR-4651 1 0 0
chr1:161209866|161210188 hsa-miR-4706 1 0 0
chr1:161209866|161210188 hsa-miR-4721 1 0 0
chr1:161209866|161210188 hsa-miR-4739 1 0 0
chr1:161209866|161210188 hsa-miR-5787 1 0 0
chr1:161209866|161210188 hsa-miR-6075 1 0 0
chr1:161209866|161210188 hsa-miR-8089 1 0 0
chr1:161209866|161210188 hsa-miR-504-3p 1 0 0
chr1:161209866|161210188 hsa-miR-6747-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4726-3p 1 0 0
chr1:161209866|161210188 hsa-miR-671-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6894-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4687-3p 1 0 0
chr1:161209866|161210188 hsa-miR-6720-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6799-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6880-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4695-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4722-5p 1 0 0
chr1:161209866|161210188 hsa-miR-3677-5p 1 0 0
chr1:161209866|161210188 hsa-miR-7160-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6741-5p 1 0 0
chr1:161209866|161210188 hsa-miR-3187-3p 1 0 0
chr1:161209866|161210188 hsa-miR-7108-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6829-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6732-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6798-5p 1 0 0
chr1:161209866|161210188 hsa-miR-615-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6786-5p 1 0 0
chr1:161209866|161210188 hsa-miR-1226-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4640-5p 1 0 0
chr1:161209866|161210188 hsa-miR-3691-5p 1 0 0
chr1:161209866|161210188 hsa-miR-149-3p 1 0 0
chr1:161209866|161210188 hsa-miR-6824-5p 1 0 0
chr1:161209866|161210188 hsa-miR-574-5p 1 0 0
chr1:161209866|161210188 hsa-miR-7112-5p 1 0 0
chr1:161209866|161210188 hsa-miR-5195-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4763-3p 1 0 0
chr1:161209866|161210188 hsa-miR-6787-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6870-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6752-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6756-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6803-5p 1 0 0
chr1:161209866|161210188 hsa-miR-7110-5p 1 0 0
chr1:161209866|161210188 hsa-miR-1249-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6751-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6779-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6780a-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6797-5p 1 0 0
chr1:161209866|161210188 hsa-miR-7111-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4728-5p 1 0 0
chr1:161209866|161210188 hsa-miR-5196-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6836-5p 1 0 0
chr1:161209866|161210188 hsa-miR-1237-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4649-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6729-5p 1 0 0
chr1:161209866|161210188 hsa-miR-675-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6848-5p 1 0 0
chr1:161209866|161210188 hsa-miR-939-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4758-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6785-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6724-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6791-5p 1 0 0
chr1:161209866|161210188 hsa-miR-6718-5p 1 0 0
chr1:161209866|161210188 hsa-miR-4690-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:161209866|161210188
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MGKPGTCSPGALLLAGYKQHAFGLQTLARR
Nucleotide Sequence TTGGGGAAGCCGGGGACCTGCTCACCTGGTGCACTCCTCCTGGCCGGATATAAGCAGCATGCATTCGGGCTCCAGACACTCGCTCGTAGA
CircID chr1:161209866|161210188
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MPSSGHRENRPGLDIWGSRGPAHLVHSSWPDISSMHSGSRHSLVE
Nucleotide Sequence CTGCCCTCCAGTGGCCACAGGGAAAATAGGCCTGGGCTGGACATTTGGGGAAGCCGGGGACCTGCTCACCTGGTGCACTCCTCCTGGCCGGATATAAGCAGCATGCATTCGGGCTCCAGACACTCGCTCGTAGAA
CircID chr1:161209866|161210188
ORF Type ORF3
Protein Length 52
Nucleotide Length 159
Protein Sequence MHAAYIRPGGVHQVSRSPASPNVQPRPIFPVATGGQCWMMETPNLYRWGRGC
Nucleotide Sequence ATGCATGCTGCTTATATCCGGCCAGGAGGAGTGCACCAGGTGAGCAGGTCCCCGGCTTCCCCAAATGTCCAGCCCAGGCCTATTTTCCCTGTGGCCACTGGAGGGCAGTGCTGGATGATGGAAACTCCAAACCTGTATCGCTGGGGGAGGGGGTGCTGA
CircID chr1:161209866|161210188
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MASRTYPLGLWMTFISFLRTSLFGLMSWR
Nucleotide Sequence TTGGCTTCTAGGACCTACCCCTTGGGCTTATGGATGACATTTATCAGTTTTCTAAGAACTTCTCTCTTCGGCTTGATGAGTTGGAGG
CircID chr1:161209866|161210188
ORF Type ORF5
Protein Length 35
Nucleotide Length 108
Protein Sequence MDDGNSKPVSLGEGVLRGLSLVKAMPHSVALPFGF
Nucleotide Sequence CTGGATGATGGAAACTCCAAACCTGTATCGCTGGGGGAGGGGGTGCTGAGAGGGCTCTCCTTAGTGAAGGCTATGCCACATTCAGTAGCACTTCCGTTTGGCTTCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab