CircNet

General Information

circRNA Basic Information

CircID	chr1:16124824\|16124937
Strand	+
CircType	exon
Host Gene	ENSG00000142627.12;
Algorism	CIRI2;
Sequence	AGCCTTCGGACAGACATATGGGATATTCCCAAGCCGACCTTCCCTCCGCCTTCTCCCACATGAGGCCATCTCAGGAGATGGAGGGCTTGGCCCAGCGCCAAGTAAACAGGGTAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:16124824\|16124937	hsa-miR-10a-5p	0	0	1
chr1:16124824\|16124937	hsa-miR-10a-3p	0	0	1
chr1:16124824\|16124937	hsa-miR-10b-5p	0	0	1
chr1:16124824\|16124937	hsa-miR-10b-3p	0	0	1
chr1:16124824\|16124937	hsa-miR-143-5p	0	0	1
chr1:16124824\|16124937	hsa-miR-143-3p	0	0	1
chr1:16124824\|16124937	hsa-miR-493-5p	0	0	1
chr1:16124824\|16124937	hsa-miR-493-3p	0	0	1
chr1:16124824\|16124937	hsa-miR-658	1	1	1
chr1:16124824\|16124937	hsa-miR-890	0	0	1
chr1:16124824\|16124937	hsa-miR-1200	0	0	1
chr1:16124824\|16124937	hsa-miR-299-3p	0	0	1
chr1:16124824\|16124937	hsa-miR-654-3p	0	0	1
chr1:16124824\|16124937	hsa-miR-1274b	0	0	1
chr1:16124824\|16124937	hsa-miR-638	1	0	0
chr1:16124824\|16124937	hsa-miR-4290	0	1	0
chr1:16124824\|16124937	hsa-miR-4516	0	1	0
chr1:16124824\|16124937	hsa-miR-4739	1	0	0
chr1:16124824\|16124937	hsa-miR-5703	0	1	0
chr1:16124824\|16124937	hsa-miR-8072	1	0	0
chr1:16124824\|16124937	hsa-miR-6746-5p	1	0	0
chr1:16124824\|16124937	hsa-miR-6798-5p	1	0	0
chr1:16124824\|16124937	hsa-miR-6760-5p	1	1	0
chr1:16124824\|16124937	hsa-miR-30c-2-3p	0	1	0
chr1:16124824\|16124937	hsa-miR-6824-5p	1	0	0
chr1:16124824\|16124937	hsa-miR-6778-5p	1	1	0
chr1:16124824\|16124937	hsa-miR-6787-5p	0	1	0
chr1:16124824\|16124937	hsa-miR-10401-5p	1	0	0
chr1:16124824\|16124937	hsa-miR-1249-5p	0	1	0
chr1:16124824\|16124937	hsa-miR-6788-5p	0	1	0
chr1:16124824\|16124937	hsa-miR-6797-5p	1	1	0
chr1:16124824\|16124937	hsa-miR-5196-5p	1	1	0
chr1:16124824\|16124937	hsa-miR-6780b-5p	1	1	0
chr1:16124824\|16124937	hsa-miR-6729-5p	1	0	0
chr1:16124824\|16124937	hsa-miR-30c-1-3p	0	1	0
chr1:16124824\|16124937	hsa-miR-4747-5p	1	1	0
chr1:16124824\|16124937	hsa-miR-450a-1-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:16124824\|16124937
ORF Type	ORF1
Protein Length	32
Nucleotide Length	96
Protein Sequence	MGYSQADLPSAFSHMRPSQEMEGLAQRQVNRV
Nucleotide Sequence	ATGGGATATTCCCAAGCCGACCTTCCCTCCGCCTTCTCCCACATGAGGCCATCTCAGGAGATGGAGGGCTTGGCCCAGCGCCAAGTAAACAGGGTA

CircID	chr1:16124824\|16124937
ORF Type	ORF2
Protein Length	33
Nucleotide Length	99
Protein Sequence	MALGQALHLLRWPHVGEGGGKVGLGISHMSVRR
Nucleotide Sequence	TTGGCGCTGGGCCAAGCCCTCCATCTCCTGAGATGGCCTCATGTGGGAGAAGGCGGAGGGAAGGTCGGCTTGGGAATATCCCATATGTCTGTCCGAAGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information