CircRNA Information

General Information
circRNA Basic Information
CircID chr1:161542120|161542260
Strand -
CircType exon
Host Gene ENSG00000203747.8;
Algorism CIRI2;
Sequence CCTGGCCAAGAAAGCATTTTCACCTCCTGCGCTTTCCTTCCTGTGTGCTTGTGGTTGGTTCTTTCTTCTCAGGCTTTCTCATTCTGATGCTGAGATAGTTCTGTTCACTTAGCAACTTGGGACAGTGACACAGGGTTTGTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:161542120|161542260 hsa-miR-10a-5p 0 0 1
chr1:161542120|161542260 hsa-miR-10a-3p 0 0 1
chr1:161542120|161542260 hsa-miR-10b-5p 0 0 1
chr1:161542120|161542260 hsa-miR-10b-3p 0 0 1
chr1:161542120|161542260 hsa-miR-495-5p 0 0 1
chr1:161542120|161542260 hsa-miR-495-3p 0 0 1
chr1:161542120|161542260 hsa-miR-518f-5p 0 0 1
chr1:161542120|161542260 hsa-miR-518f-3p 0 0 1
chr1:161542120|161542260 hsa-miR-518b 0 0 1
chr1:161542120|161542260 hsa-miR-518c-5p 0 0 1
chr1:161542120|161542260 hsa-miR-518c-3p 0 0 1
chr1:161542120|161542260 hsa-miR-539-5p 0 0 1
chr1:161542120|161542260 hsa-miR-539-3p 0 0 1
chr1:161542120|161542260 hsa-miR-578 0 0 1
chr1:161542120|161542260 hsa-miR-588 0 0 1
chr1:161542120|161542260 hsa-miR-592 0 0 1
chr1:161542120|161542260 hsa-miR-597-5p 0 0 1
chr1:161542120|161542260 hsa-miR-597-3p 0 0 1
chr1:161542120|161542260 hsa-miR-668-5p 0 0 1
chr1:161542120|161542260 hsa-miR-668-3p 0 0 1
chr1:161542120|161542260 hsa-miR-1208 0 0 1
chr1:161542120|161542260 hsa-miR-1253 0 1 1
chr1:161542120|161542260 hsa-miR-1252-5p 0 0 1
chr1:161542120|161542260 hsa-miR-1252-3p 0 0 1
chr1:161542120|161542260 hsa-miR-518a-3p 0 0 1
chr1:161542120|161542260 hsa-miR-518d-3p 0 0 1
chr1:161542120|161542260 hsa-miR-548b-3p 0 0 1
chr1:161542120|161542260 hsa-miR-1300 0 0 1
chr1:161542120|161542260 hsa-miR-3153 0 1 0
chr1:161542120|161542260 hsa-miR-4251 0 1 0
chr1:161542120|161542260 hsa-miR-4270 1 0 0
chr1:161542120|161542260 hsa-miR-4441 1 0 0
chr1:161542120|161542260 hsa-miR-4476 1 0 0
chr1:161542120|161542260 hsa-miR-4533 1 1 0
chr1:161542120|161542260 hsa-miR-4739 1 1 0
chr1:161542120|161542260 hsa-miR-4779 1 0 0
chr1:161542120|161542260 hsa-miR-6133 1 0 0
chr1:161542120|161542260 hsa-miR-7106-5p 1 0 0
chr1:161542120|161542260 hsa-miR-4695-5p 1 0 0
chr1:161542120|161542260 hsa-miR-4722-5p 1 0 0
chr1:161542120|161542260 hsa-miR-4711-5p 0 1 0
chr1:161542120|161542260 hsa-miR-6768-5p 0 1 0
chr1:161542120|161542260 hsa-miR-6760-5p 1 0 0
chr1:161542120|161542260 hsa-miR-3202 1 0 0
chr1:161542120|161542260 hsa-miR-146b-3p 0 1 0
chr1:161542120|161542260 hsa-miR-2115-3p 0 1 0
chr1:161542120|161542260 hsa-miR-7112-5p 1 0 0
chr1:161542120|161542260 hsa-miR-483-5p 1 0 0
chr1:161542120|161542260 hsa-miR-6760-3p 0 1 0
chr1:161542120|161542260 hsa-miR-6732-3p 0 1 0
chr1:161542120|161542260 hsa-miR-676-3p 0 1 0
chr1:161542120|161542260 hsa-miR-1207-5p 1 0 0
chr1:161542120|161542260 hsa-miR-6754-5p 1 0 0
chr1:161542120|161542260 hsa-miR-1249-5p 1 0 0
chr1:161542120|161542260 hsa-miR-6797-5p 1 0 0
chr1:161542120|161542260 hsa-miR-5196-5p 1 0 0
chr1:161542120|161542260 hsa-miR-6780b-5p 1 0 0
chr1:161542120|161542260 hsa-miR-4725-3p 1 0 0
chr1:161542120|161542260 hsa-miR-6856-5p 1 0 0
chr1:161542120|161542260 hsa-miR-4747-5p 1 0 0
chr1:161542120|161542260 hsa-miR-6876-5p 1 1 0
chr1:161542120|161542260 hsa-miR-6891-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:161542120|161542260
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence LAKKAFSPPALSFLCACGWFFLLRLSHSDAEIVLFT
Nucleotide Sequence CTGGCCAAGAAAGCATTTTCACCTCCTGCGCTTTCCTTCCTGTGTGCTTGTGGTTGGTTCTTTCTTCTCAGGCTTTCTCATTCTGATGCTGAGATAGTTCTGTTCACTTAG

CircID chr1:161542120|161542260
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MCHCPKLLSEQNYLSIRMRKPEKKEPTTSTQEGKRRR
Nucleotide Sequence CTGTGTCACTGTCCCAAGTTGCTAAGTGAACAGAACTATCTCAGCATCAGAATGAGAAAGCCTGAGAAGAAAGAACCAACCACAAGCACACAGGAAGGAAAGCGCAGGAGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites