CircRNA Information

General Information
circRNA Basic Information
CircID chr1:16395674|16395991
Strand +
CircType exon
Host Gene ENSG00000055070.15;
Algorism CIRI2;
Sequence TTTCCCTATCTCCCAAAATACTAGAGGTGGGGTTGGCACCCTCCCCAGGCTCTCCGAGCCTACAGAGCTAGCCCAGTCTCCAGGCAAGGCCCAGATGCCCTGGGACTTAGCTCGGGGAGGGAGGTATAGGCATGGGGTGCTCGTCTGTCCTGGCGGCTGCAGAGCCCTGCCCCTTTTCTGGGCGGCAGTAGGAATACAGAAGCTAAGCTCACCAAAATCCTATTGGTTAATGTTTCTAGTGAATTTCCCAGAAACATTTTTAAGTAGACTACCAAACTACCCTTTCTTAATTAAAAATTCATTAAACCACTAAAACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:16395674|16395991 hsa-miR-325 0 0 1
chr1:16395674|16395991 hsa-miR-494-5p 0 0 1
chr1:16395674|16395991 hsa-miR-494-3p 0 0 1
chr1:16395674|16395991 hsa-miR-610 0 0 1
chr1:16395674|16395991 hsa-miR-612 0 0 1
chr1:16395674|16395991 hsa-miR-630 0 0 1
chr1:16395674|16395991 hsa-miR-661 0 0 1
chr1:16395674|16395991 hsa-miR-760 0 1 1
chr1:16395674|16395991 hsa-miR-934 0 0 1
chr1:16395674|16395991 hsa-miR-939-5p 0 0 1
chr1:16395674|16395991 hsa-miR-939-3p 0 0 1
chr1:16395674|16395991 hsa-miR-1205 0 0 1
chr1:16395674|16395991 hsa-miR-1290 0 0 1
chr1:16395674|16395991 hsa-miR-140-5p 0 0 1
chr1:16395674|16395991 hsa-miR-486-3p 0 1 1
chr1:16395674|16395991 hsa-miR-1184 0 0 1
chr1:16395674|16395991 hsa-miR-1224-3p 0 0 1
chr1:16395674|16395991 hsa-miR-628-3p 0 0 1
chr1:16395674|16395991 hsa-miR-875-5p 0 0 1
chr1:16395674|16395991 hsa-miR-299-5p 0 0 1
chr1:16395674|16395991 hsa-miR-1207-5p 0 0 1
chr1:16395674|16395991 hsa-miR-548c-3p 0 0 1
chr1:16395674|16395991 hsa-miR-1285 0 0 1
chr1:16395674|16395991 hsa-miR-1254 0 0 1
chr1:16395674|16395991 hsa-miR-663a 1 0 0
chr1:16395674|16395991 hsa-miR-1183 0 1 0
chr1:16395674|16395991 hsa-miR-3154 1 0 0
chr1:16395674|16395991 hsa-miR-3185 1 0 0
chr1:16395674|16395991 hsa-miR-4322 0 1 0
chr1:16395674|16395991 hsa-miR-3685 0 1 0
chr1:16395674|16395991 hsa-miR-4436a 0 1 0
chr1:16395674|16395991 hsa-miR-4460 1 1 0
chr1:16395674|16395991 hsa-miR-4463 0 1 0
chr1:16395674|16395991 hsa-miR-4641 1 1 0
chr1:16395674|16395991 hsa-miR-5193 0 1 0
chr1:16395674|16395991 hsa-miR-5681a 0 1 0
chr1:16395674|16395991 hsa-miR-5739 0 1 0
chr1:16395674|16395991 hsa-miR-8089 0 1 0
chr1:16395674|16395991 hsa-miR-3194-3p 0 1 0
chr1:16395674|16395991 hsa-miR-4665-3p 1 0 0
chr1:16395674|16395991 hsa-miR-6825-5p 0 1 0
chr1:16395674|16395991 hsa-miR-6804-5p 0 1 0
chr1:16395674|16395991 hsa-miR-3663-3p 1 0 0
chr1:16395674|16395991 hsa-miR-1301-3p 1 1 0
chr1:16395674|16395991 hsa-miR-6890-5p 1 0 0
chr1:16395674|16395991 hsa-miR-6721-5p 0 1 0
chr1:16395674|16395991 hsa-miR-4761-3p 0 1 0
chr1:16395674|16395991 hsa-miR-197-5p 1 0 0
chr1:16395674|16395991 hsa-miR-27b-5p 0 1 0
chr1:16395674|16395991 hsa-miR-1915-5p 0 1 0
chr1:16395674|16395991 hsa-miR-6796-5p 1 0 0
chr1:16395674|16395991 hsa-miR-5088-5p 0 1 0
chr1:16395674|16395991 hsa-miR-1226-5p 1 0 0
chr1:16395674|16395991 hsa-miR-1908-3p 1 0 0
chr1:16395674|16395991 hsa-miR-4640-5p 1 0 0
chr1:16395674|16395991 hsa-miR-6514-3p 0 1 0
chr1:16395674|16395991 hsa-miR-4783-5p 1 0 0
chr1:16395674|16395991 hsa-miR-7156-3p 0 1 0
chr1:16395674|16395991 hsa-miR-7112-5p 1 1 0
chr1:16395674|16395991 hsa-miR-6826-5p 0 1 0
chr1:16395674|16395991 hsa-miR-4742-3p 0 1 0
chr1:16395674|16395991 hsa-miR-6871-3p 1 1 0
chr1:16395674|16395991 hsa-miR-6872-3p 0 1 0
chr1:16395674|16395991 hsa-miR-4649-3p 1 0 0
chr1:16395674|16395991 hsa-miR-1911-5p 1 1 0
chr1:16395674|16395991 hsa-miR-1298-3p 0 1 0
chr1:16395674|16395991 hsa-miR-4763-3p 0 1 0
chr1:16395674|16395991 hsa-miR-6775-5p 1 0 0
chr1:16395674|16395991 hsa-miR-5001-5p 0 1 0
chr1:16395674|16395991 hsa-miR-6743-5p 1 1 0
chr1:16395674|16395991 hsa-miR-1915-3p 0 1 0
chr1:16395674|16395991 hsa-miR-6836-5p 0 1 0
chr1:16395674|16395991 hsa-miR-6862-5p 1 0 0
chr1:16395674|16395991 hsa-miR-10396a-5p 0 1 0
chr1:16395674|16395991 hsa-miR-10396b-5p 1 1 0
chr1:16395674|16395991 hsa-miR-4685-5p 1 1 0
chr1:16395674|16395991 hsa-miR-4749-5p 1 0 0
chr1:16395674|16395991 hsa-miR-6883-5p 0 1 0
chr1:16395674|16395991 hsa-miR-6889-5p 0 1 0
chr1:16395674|16395991 hsa-miR-3085-5p 0 1 0
chr1:16395674|16395991 hsa-miR-4664-5p 1 1 0
chr1:16395674|16395991 hsa-miR-4700-5p 0 1 0
chr1:16395674|16395991 hsa-miR-6791-5p 1 0 0
chr1:16395674|16395991 hsa-miR-6837-5p 0 1 0
chr1:16395674|16395991 hsa-miR-6764-5p 0 1 0
chr1:16395674|16395991 hsa-miR-9902 0 1 0
chr1:16395674|16395991 hsa-miR-10395-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:16395674|16395991
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MSWRLQSPAPFLGGSRNTEAKLTKILLVNVSSEFPRNIFK
Nucleotide Sequence CTGTCCTGGCGGCTGCAGAGCCCTGCCCCTTTTCTGGGCGGCAGTAGGAATACAGAAGCTAAGCTCACCAAAATCCTATTGGTTAATGTTTCTAGTGAATTTCCCAGAAACATTTTTAAGTAG
CircID chr1:16395674|16395991
ORF Type ORF2
Protein Length 72
Nucleotide Length 219
Protein Sequence MPWDLARGGRYRHGVLVCPGGCRALPLFWAAVGIQKLSSPKSYWLMFLVNFPETFLSRLPNYPFLIKNSLNH
Nucleotide Sequence ATGCCCTGGGACTTAGCTCGGGGAGGGAGGTATAGGCATGGGGTGCTCGTCTGTCCTGGCGGCTGCAGAGCCCTGCCCCTTTTCTGGGCGGCAGTAGGAATACAGAAGCTAAGCTCACCAAAATCCTATTGGTTAATGTTTCTAGTGAATTTCCCAGAAACATTTTTAAGTAGACTACCAAACTACCCTTTCTTAATTAAAAATTCATTAAACCACTAA
CircID chr1:16395674|16395991
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MQPPGQTSTPCLYLPPRAKSQGIWALPGDWASSVGSESLGRVPTPPLVFWEIGK
Nucleotide Sequence CTGCAGCCGCCAGGACAGACGAGCACCCCATGCCTATACCTCCCTCCCCGAGCTAAGTCCCAGGGCATCTGGGCCTTGCCTGGAGACTGGGCTAGCTCTGTAGGCTCGGAGAGCCTGGGGAGGGTGCCAACCCCACCTCTAGTATTTTGGGAGATAGGGAAA
CircID chr1:16395674|16395991
ORF Type ORF4
Protein Length 71
Nucleotide Length 216
Protein Sequence MVVYLKMFLGNSLETLTNRILVSLASVFLLPPRKGAGLCSRQDRRAPHAYTSLPELSPRASGPCLETGLAL
Nucleotide Sequence TTGGTAGTCTACTTAAAAATGTTTCTGGGAAATTCACTAGAAACATTAACCAATAGGATTTTGGTGAGCTTAGCTTCTGTATTCCTACTGCCGCCCAGAAAAGGGGCAGGGCTCTGCAGCCGCCAGGACAGACGAGCACCCCATGCCTATACCTCCCTCCCCGAGCTAAGTCCCAGGGCATCTGGGCCTTGCCTGGAGACTGGGCTAGCTCTGTAG
CircID chr1:16395674|16395991
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MYSYCRPEKGQGSAAARTDEHPMPIPPSPS
Nucleotide Sequence CTGTATTCCTACTGCCGCCCAGAAAAGGGGCAGGGCTCTGCAGCCGCCAGGACAGACGAGCACCCCATGCCTATACCTCCCTCCCCGAGCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab