CircRNA Information

General Information
circRNA Basic Information
CircID chr1:16475945|16476055
Strand -
CircType exon
Host Gene ENSG00000080947.13;
Algorism CIRI2;
Sequence CTCCTGTTCCAACCGCAGCGCCTCCAGCCGCTCCTGCTCTTCCCGTGCCACTGTGGCCTCCTGCTTCGCCTGCCGCTGCCGGCCCTGCAGGGCGCACTTTTCTTCCTCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:16475945|16476055 hsa-miR-17-5p 0 0 1
chr1:16475945|16476055 hsa-miR-17-3p 0 0 1
chr1:16475945|16476055 hsa-miR-20a-5p 0 0 1
chr1:16475945|16476055 hsa-miR-20a-3p 0 0 1
chr1:16475945|16476055 hsa-miR-93-5p 0 0 1
chr1:16475945|16476055 hsa-miR-93-3p 0 0 1
chr1:16475945|16476055 hsa-miR-106a-5p 0 0 1
chr1:16475945|16476055 hsa-miR-106a-3p 0 0 1
chr1:16475945|16476055 hsa-miR-106b-5p 0 0 1
chr1:16475945|16476055 hsa-miR-106b-3p 0 0 1
chr1:16475945|16476055 hsa-miR-20b-5p 0 0 1
chr1:16475945|16476055 hsa-miR-20b-3p 0 0 1
chr1:16475945|16476055 hsa-miR-519d-5p 0 0 1
chr1:16475945|16476055 hsa-miR-519d-3p 0 0 1
chr1:16475945|16476055 hsa-miR-564 1 0 1
chr1:16475945|16476055 hsa-miR-650 1 0 1
chr1:16475945|16476055 hsa-miR-765 0 0 1
chr1:16475945|16476055 hsa-miR-1205 0 0 1
chr1:16475945|16476055 hsa-miR-885-3p 1 0 1
chr1:16475945|16476055 hsa-miR-128 0 0 1
chr1:16475945|16476055 hsa-miR-920 1 0 0
chr1:16475945|16476055 hsa-miR-3132 1 0 0
chr1:16475945|16476055 hsa-miR-3188 1 0 0
chr1:16475945|16476055 hsa-miR-3196 1 0 0
chr1:16475945|16476055 hsa-miR-3197 1 0 0
chr1:16475945|16476055 hsa-miR-3652 1 0 0
chr1:16475945|16476055 hsa-miR-3665 1 0 0
chr1:16475945|16476055 hsa-miR-3937 1 0 0
chr1:16475945|16476055 hsa-miR-3135b 1 0 0
chr1:16475945|16476055 hsa-miR-4498 1 0 0
chr1:16475945|16476055 hsa-miR-3960 1 0 0
chr1:16475945|16476055 hsa-miR-4734 1 0 0
chr1:16475945|16476055 hsa-miR-4739 1 0 0
chr1:16475945|16476055 hsa-miR-5194 1 0 0
chr1:16475945|16476055 hsa-miR-5787 1 0 0
chr1:16475945|16476055 hsa-miR-6081 1 0 0
chr1:16475945|16476055 hsa-miR-6085 1 0 0
chr1:16475945|16476055 hsa-miR-6125 1 0 0
chr1:16475945|16476055 hsa-miR-6165 1 0 0
chr1:16475945|16476055 hsa-miR-7150 1 0 0
chr1:16475945|16476055 hsa-miR-8072 1 0 0
chr1:16475945|16476055 hsa-miR-8085 1 0 0
chr1:16475945|16476055 hsa-miR-8089 1 0 0
chr1:16475945|16476055 hsa-miR-12115 1 0 0
chr1:16475945|16476055 hsa-miR-12122 1 0 0
chr1:16475945|16476055 hsa-miR-4731-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4665-3p 1 0 0
chr1:16475945|16476055 hsa-miR-4433a-3p 1 0 0
chr1:16475945|16476055 hsa-miR-6799-5p 1 0 0
chr1:16475945|16476055 hsa-miR-139-3p 1 0 0
chr1:16475945|16476055 hsa-miR-3622a-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6089 1 0 0
chr1:16475945|16476055 hsa-miR-4695-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6746-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4722-5p 1 0 0
chr1:16475945|16476055 hsa-miR-3622b-5p 1 0 0
chr1:16475945|16476055 hsa-miR-197-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6805-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6771-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4690-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4732-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4743-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4446-3p 1 0 0
chr1:16475945|16476055 hsa-miR-6789-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6781-5p 1 0 0
chr1:16475945|16476055 hsa-miR-2277-5p 1 0 0
chr1:16475945|16476055 hsa-miR-10400-5p 1 0 0
chr1:16475945|16476055 hsa-miR-1207-5p 1 0 0
chr1:16475945|16476055 hsa-miR-1233-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4763-3p 1 0 0
chr1:16475945|16476055 hsa-miR-6778-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6787-5p 1 0 0
chr1:16475945|16476055 hsa-miR-1343-5p 1 0 0
chr1:16475945|16476055 hsa-miR-5001-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6726-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6743-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6813-5p 1 0 0
chr1:16475945|16476055 hsa-miR-11181-3p 1 0 0
chr1:16475945|16476055 hsa-miR-6722-3p 1 0 0
chr1:16475945|16476055 hsa-miR-6879-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4728-5p 1 0 0
chr1:16475945|16476055 hsa-miR-5196-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6836-5p 1 0 0
chr1:16475945|16476055 hsa-miR-1909-3p 1 0 0
chr1:16475945|16476055 hsa-miR-328-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4632-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4726-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6777-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6846-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6848-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6889-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6845-5p 1 0 0
chr1:16475945|16476055 hsa-miR-939-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6731-5p 1 0 0
chr1:16475945|16476055 hsa-miR-4646-5p 1 0 0
chr1:16475945|16476055 hsa-miR-6762-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:16475945|16476055
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MFQPQRLQPLLLFPCHCGLLLRLPLPALQGALFFLQ
Nucleotide Sequence CTGTTCCAACCGCAGCGCCTCCAGCCGCTCCTGCTCTTCCCGTGCCACTGTGGCCTCCTGCTTCGCCTGCCGCTGCCGGCCCTGCAGGGCGCACTTTTCTTCCTCCAG
CircID chr1:16475945|16476055
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence LEEEKCALQGRQRQAKQEATVAREEQERLEALRLEQE
Nucleotide Sequence CTGGAGGAAGAAAAGTGCGCCCTGCAGGGCCGGCAGCGGCAGGCGAAGCAGGAGGCCACAGTGGCACGGGAAGAGCAGGAGCGGCTGGAGGCGCTGCGGTTGGAACAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab