CircNet

General Information

circRNA Basic Information

CircID	chr1:168043025\|168045227
Strand	+
CircType	exon
Host Gene	ENSG00000143164.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAGCAGTATAGCATCAAGTTCTAGAGGAATTGGGAGCCATTGCAAATCTGAGGGTCAGGAGGAATCTTTCGTCCCACAGAGCTCAGTGCAACCACCAGAAGGAGACAGTGAAACAAAAGCTCCTGAAGAATCATCAGAGGATGTGACAAAATATCAGGAAGGAGTATCTGCAGAAAACCCAGTTGAGAACCATATCAATATAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:168043025\|168045227
ORF Type	ORF1
Protein Length	38
Nucleotide Length	114
Protein Sequence	MILQELLFHCLLLVVALSSVGRKIPPDPQICNGSQFL*
Nucleotide Sequence	ATGATTCTTCAGGAGCTTTTGTTTCACTGTCTCCTTCTGGTGGTTGCACTGAGCTCTGTGGGACGAAAGATTCCTCCTGACCCTCAGATTTGCAATGGCTCCCAATTCCTCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:168043025\|168045227	RBM5	2	0	0
chr1:168043025\|168045227	U2AF2	35	29	0
chr1:168043025\|168045227	MOV10	0	1	0
chr1:168043025\|168045227	ELAVL1	2	4	1
chr1:168043025\|168045227	SF3B4	1	0	0
chr1:168043025\|168045227	CPSF7	1	1	0
chr1:168043025\|168045227	TNRC6A	3	0	0
chr1:168043025\|168045227	FMR1	2	0	1
chr1:168043025\|168045227	NUDT21	0	2	0
chr1:168043025\|168045227	CPSF4	0	1	0
chr1:168043025\|168045227	XRCC6	0	0	1
chr1:168043025\|168045227	SRSF1	0	3	4
chr1:168043025\|168045227	NOP58	2	1	1
chr1:168043025\|168045227	U2AF1	0	0	1
chr1:168043025\|168045227	NOP56	0	1	1
chr1:168043025\|168045227	SRSF9	0	0	2
chr1:168043025\|168045227	DDX54	1	0	4
chr1:168043025\|168045227	RBM10	0	1	0
chr1:168043025\|168045227	PCBP2	0	1	0
chr1:168043025\|168045227	SF3A3	1	0	0
chr1:168043025\|168045227	FIP1L1	1	0	1
chr1:168043025\|168045227	PTBP1	5	50	0
chr1:168043025\|168045227	HNRNPC	42	18	1
chr1:168043025\|168045227	SUGP2	0	2	0
chr1:168043025\|168045227	TRA2A	0	0	1
chr1:168043025\|168045227	HNRNPA1	12	4	0
chr1:168043025\|168045227	SMNDC1	1	0	1
chr1:168043025\|168045227	ACIN1	1	0	2
chr1:168043025\|168045227	FXR2	0	0	1
chr1:168043025\|168045227	IGF2BP1	0	0	3
chr1:168043025\|168045227	IGF2BP3	0	0	1
chr1:168043025\|168045227	IGF2BP2	0	0	3
chr1:168043025\|168045227	TARDBP	2	2	1
chr1:168043025\|168045227	STAU1	1	0	0
chr1:168043025\|168045227	TAF15	0	1	0
chr1:168043025\|168045227	BUD13	0	0	2
chr1:168043025\|168045227	KHSRP	0	1	0
chr1:168043025\|168045227	PRPF8	0	1	0
chr1:168043025\|168045227	RTCB	0	1	0
chr1:168043025\|168045227	CSTF2T	3	4	0
chr1:168043025\|168045227	CSTF2	1	5	0
chr1:168043025\|168045227	FUS	0	1	0
chr1:168043025\|168045227	WDR33	0	3	0
chr1:168043025\|168045227	HNRNPK	0	1	0
chr1:168043025\|168045227	FBL	1	0	1
chr1:168043025\|168045227	EIF4A3	5	4	3
chr1:168043025\|168045227	AGO2	1	2	2

CircRNA Information