CircNet

General Information

circRNA Basic Information

CircID	chr1:169954011\|169992255
Strand	-
CircType	exon
Host Gene	ENSG00000075945.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCAATGACAACTACAAACAAATAGCAATGTGTGTTCTTTACCACATAAGCATGGATGACCGCTTTAAATCAATGTTTGCATACACTGACTGTATACCACAGTTAATGAAGATGCTGTTTGAATGTTCAGATGAACGAATTGACTTGGAACTCATTTCTTTCTGCATTAATCTTGCTGCTAACAAAAGAAATGTACAGCTTATCTGTGAAGGAAATGGGCTGAAGATGCTCATGAAGAGGGCTCTGAAGTTTAAGGATCCATTGCTGATGAAAATGATTAGAAACATTTCTCAGCATGATGGACCAACTAAAAATCTGTTTATTGATTATGTTGGGGACCTTGCAGCCCAGATCTCTAATGATGAAGAAGAGGAGTTTGTGATTGAATGTTTGGGAACTCTTGCAAACTTGACCATTCCAGACTTAGACTGGGAATTGGTTCTTAAAGAATATAAGTTGGTTCCATACCTCAAGGATAAACTAAAACCAGCTCAACAAGAAGATGATGAATTTGTGTGTCAGATAATTTATGTCTTCTACCAGATGGTTTTCCACCAAGCCACAAGAGACGTCATAATCAAGGAAACACAGGCTCCAGCATATCTCATAGACCTAATGCATGATAAGAATAATGAAATCCGAAAGGTCTGTGATAATACATTAGATATTATAGCGGAATATGATGAAGAATGGGCTAAGAAAATTCAGAGTGAAAAGTTTCGCTGGCATAACTCTCAGTGGCTGGAGATGGTAGAGAGTCGTCAGATGGATGAGAGTGAGCAGTACTTGTATGGTGATGATCGAATTGAGCCATACATTCATGAAGGAGATATTCTCGAAAGACCTGACCTTTTCTACAACTCAGATGGATTAATTGCCTCTGAAGGAGCCATAAGTCCCGATTTCTTCAATGATTACCACCTTCAAAATGGAGATGTTGTTGGGCAGCATTCATTTCCTGGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:169954011\|169992255
ORF Type	ORF1
Protein Length	312
Nucleotide Length	936
Protein Sequence	MCVLYHISMDDRFKSMFAYTDCIPQLMKMLFECSDERIDLELISFCINLAANKRNVQLICEGNGLKMLMKRALKFKDPLLMKMIRNISQHDGPTKNLFIDYVGDLAAQISNDEEEEFVIECLGTLANLTIPDLDWELVLKEYKLVPYLKDKLKPAQQEDDEFVCQIIYVFYQMVFHQATRDVIIKETQAPAYLIDLMHDKNNEIRKVCDNTLDIIAEYDEEWAKKIQSEKFRWHNSQWLEMVESRQMDESEQYLYGDDRIEPYIHEGDILERPDLFYNSDGLIASEGAISPDFFNDYHLQNGDVVGQHSFPG
Nucleotide Sequence	ATGTGTGTTCTTTACCACATAAGCATGGATGACCGCTTTAAATCAATGTTTGCATACACTGACTGTATACCACAGTTAATGAAGATGCTGTTTGAATGTTCAGATGAACGAATTGACTTGGAACTCATTTCTTTCTGCATTAATCTTGCTGCTAACAAAAGAAATGTACAGCTTATCTGTGAAGGAAATGGGCTGAAGATGCTCATGAAGAGGGCTCTGAAGTTTAAGGATCCATTGCTGATGAAAATGATTAGAAACATTTCTCAGCATGATGGACCAACTAAAAATCTGTTTATTGATTATGTTGGGGACCTTGCAGCCCAGATCTCTAATGATGAAGAAGAGGAGTTTGTGATTGAATGTTTGGGAACTCTTGCAAACTTGACCATTCCAGACTTAGACTGGGAATTGGTTCTTAAAGAATATAAGTTGGTTCCATACCTCAAGGATAAACTAAAACCAGCTCAACAAGAAGATGATGAATTTGTGTGTCAGATAATTTATGTCTTCTACCAGATGGTTTTCCACCAAGCCACAAGAGACGTCATAATCAAGGAAACACAGGCTCCAGCATATCTCATAGACCTAATGCATGATAAGAATAATGAAATCCGAAAGGTCTGTGATAATACATTAGATATTATAGCGGAATATGATGAAGAATGGGCTAAGAAAATTCAGAGTGAAAAGTTTCGCTGGCATAACTCTCAGTGGCTGGAGATGGTAGAGAGTCGTCAGATGGATGAGAGTGAGCAGTACTTGTATGGTGATGATCGAATTGAGCCATACATTCATGAAGGAGATATTCTCGAAAGACCTGACCTTTTCTACAACTCAGATGGATTAATTGCCTCTGAAGGAGCCATAAGTCCCGATTTCTTCAATGATTACCACCTTCAAAATGGAGATGTTGTTGGGCAGCATTCATTTCCTGGC

CircID	chr1:169954011\|169992255
ORF Type	ORF2
Protein Length	83
Nucleotide Length	249
Protein Sequence	MFLIIFISNGSLNFRALFMSIFSPFPSQISCTFLLLAARLMQKEMSSKSIRSSEHSNSIFINCGIQSVYANIDLKRSSMLMW*
Nucleotide Sequence	ATGTTTCTAATCATTTTCATCAGCAATGGATCCTTAAACTTCAGAGCCCTCTTCATGAGCATCTTCAGCCCATTTCCTTCACAGATAAGCTGTACATTTCTTTTGTTAGCAGCAAGATTAATGCAGAAAGAAATGAGTTCCAAGTCAATTCGTTCATCTGAACATTCAAACAGCATCTTCATTAACTGTGGTATACAGTCAGTGTATGCAAACATTGATTTAAAGCGGTCATCCATGCTTATGTGGTAA

CircID	chr1:169954011\|169992255
ORF Type	ORF3
Protein Length	57
Nucleotide Length	171
Protein Sequence	MLRNVSNHFHQQWILKLQSPLHEHLQPISFTDKLYISFVSSKINAERNEFQVNSFI*
Nucleotide Sequence	ATGCTGAGAAATGTTTCTAATCATTTTCATCAGCAATGGATCCTTAAACTTCAGAGCCCTCTTCATGAGCATCTTCAGCCCATTTCCTTCACAGATAAGCTGTACATTTCTTTTGTTAGCAGCAAGATTAATGCAGAAAGAAATGAGTTCCAAGTCAATTCGTTCATCTGA

CircID	chr1:169954011\|169992255
ORF Type	ORF4
Protein Length	54
Nucleotide Length	162
Protein Sequence	MNVWLNSIITIQVLLTLIHLTTLYHLQPLRVMPAKLFTLNFLSPFFIIFRYNI*
Nucleotide Sequence	ATGAATGTATGGCTCAATTCGATCATCACCATACAAGTACTGCTCACTCTCATCCATCTGACGACTCTCTACCATCTCCAGCCACTGAGAGTTATGCCAGCGAAACTTTTCACTCTGAATTTTCTTAGCCCATTCTTCATCATATTCCGCTATAATATCTAA

CircID	chr1:169954011\|169992255
ORF Type	ORF5
Protein Length	40
Nucleotide Length	120
Protein Sequence	MAQFDHHHTSTAHSHPSDDSLPSPATESYASETFHSEFS*
Nucleotide Sequence	ATGGCTCAATTCGATCATCACCATACAAGTACTGCTCACTCTCATCCATCTGACGACTCTCTACCATCTCCAGCCACTGAGAGTTATGCCAGCGAAACTTTTCACTCTGAATTTTCTTAG

CircID	chr1:169954011\|169992255
ORF Type	ORF6
Protein Length	35
Nucleotide Length	105
Protein Sequence	MRVSSTCMVMIELSHTFMKEIFSKDLTFSTTQMD*
Nucleotide Sequence	ATGAGAGTGAGCAGTACTTGTATGGTGATGATCGAATTGAGCCATACATTCATGAAGGAGATATTCTCGAAAGACCTGACCTTTTCTACAACTCAGATGGATTAA

CircID	chr1:169954011\|169992255
ORF Type	ORF7
Protein Length	31
Nucleotide Length	93
Protein Sequence	MNELTWNSFLSALILLLTKEMYSLSVKEMG*
Nucleotide Sequence	ATGAACGAATTGACTTGGAACTCATTTCTTTCTGCATTAATCTTGCTGCTAACAAAAGAAATGTACAGCTTATCTGTGAAGGAAATGGGCTGA

CircID	chr1:169954011\|169992255
ORF Type	ORF8
Protein Length	30
Nucleotide Length	90
Protein Sequence	MVKFARVPKHSITNSSSSSLEIWAARSPT*
Nucleotide Sequence	ATGGTCAAGTTTGCAAGAGTTCCCAAACATTCAATCACAAACTCCTCTTCTTCATCATTAGAGATCTGGGCTGCAAGGTCCCCAACATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:169954011\|169992255	RBM5	1	0	0
chr1:169954011\|169992255	NOP56	0	1	0
chr1:169954011\|169992255	MOV10	0	0	1
chr1:169954011\|169992255	ELAVL1	0	1	1
chr1:169954011\|169992255	CNBP	0	0	1
chr1:169954011\|169992255	UPF1	1	1	0
chr1:169954011\|169992255	TAF15	4	0	0
chr1:169954011\|169992255	FMR1	1	0	2
chr1:169954011\|169992255	FUS	1	4	1
chr1:169954011\|169992255	DGCR8	0	0	1
chr1:169954011\|169992255	SRSF1	0	0	1
chr1:169954011\|169992255	NOP58	0	0	2
chr1:169954011\|169992255	ADAR	0	1	0
chr1:169954011\|169992255	U2AF2	5	6	2
chr1:169954011\|169992255	EIF3D	0	1	0
chr1:169954011\|169992255	LSM11	0	0	1
chr1:169954011\|169992255	HNRNPL	1	0	0
chr1:169954011\|169992255	HNRNPC	1	2	0
chr1:169954011\|169992255	WTAP	2	0	0
chr1:169954011\|169992255	LIN28B	0	0	3
chr1:169954011\|169992255	FXR1	0	0	1
chr1:169954011\|169992255	FXR2	0	0	1
chr1:169954011\|169992255	IGF2BP1	0	0	1
chr1:169954011\|169992255	IGF2BP2	0	0	3
chr1:169954011\|169992255	PRPF8	0	2	1
chr1:169954011\|169992255	ATXN2	1	0	0
chr1:169954011\|169992255	METTL3	1	0	0
chr1:169954011\|169992255	FBL	0	2	1
chr1:169954011\|169992255	AGO1	0	0	1
chr1:169954011\|169992255	EIF4A3	2	3	13
chr1:169954011\|169992255	AGO2	1	0	12

CircRNA Information