CircRNA Information

General Information
circRNA Basic Information
CircID chr1:170726665|170726952
Strand +
CircType exon
Host Gene ENSG00000116132.10;
Algorism CIRI2;
Sequence TTGGCTTTTCTTTCCTCCTCTCTCTGTCATAGTCCCTCTCGTCTCTCTCCTTCCTTCCTTCTTTCCTTTCTTTCTTCCTTCCTTCCTTCTTCCTTTTTTTAATTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCTACATTTGCATAATACAACGAATTTAGCTTAAATTTGGAAACAGGGTAAAGTTTTGTTCCAGAATTGTTGCAAGAGGAACACTGGGCACAGCTTAATGATCTTTTCTTTTAGATTCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:170726665|170726952 hsa-miR-10a-5p 0 0 1
chr1:170726665|170726952 hsa-miR-10a-3p 0 0 1
chr1:170726665|170726952 hsa-miR-10b-5p 0 0 1
chr1:170726665|170726952 hsa-miR-10b-3p 0 0 1
chr1:170726665|170726952 hsa-miR-185-5p 0 0 1
chr1:170726665|170726952 hsa-miR-185-3p 0 0 1
chr1:170726665|170726952 hsa-miR-425-5p 0 0 1
chr1:170726665|170726952 hsa-miR-425-3p 0 0 1
chr1:170726665|170726952 hsa-miR-1296-5p 0 0 1
chr1:170726665|170726952 hsa-miR-1296-3p 0 0 1
chr1:170726665|170726952 hsa-miR-1323 0 0 1
chr1:170726665|170726952 hsa-miR-892b 0 0 1
chr1:170726665|170726952 hsa-miR-548e-5p 0 0 1
chr1:170726665|170726952 hsa-miR-548e-3p 0 0 1
chr1:170726665|170726952 hsa-miR-1299 0 0 1
chr1:170726665|170726952 hsa-miR-548o-3p 0 0 1
chr1:170726665|170726952 hsa-miR-1252-5p 0 0 1
chr1:170726665|170726952 hsa-miR-1252-3p 0 0 1
chr1:170726665|170726952 hsa-miR-548o 0 0 1
chr1:170726665|170726952 hsa-miR-199a-5p 0 0 1
chr1:170726665|170726952 hsa-miR-875-3p 0 0 1
chr1:170726665|170726952 hsa-miR-199b-5p 0 0 1
chr1:170726665|170726952 hsa-miR-491-3p 0 0 1
chr1:170726665|170726952 hsa-miR-548a-3p 0 0 1
chr1:170726665|170726952 hsa-miR-1274b 0 0 1
chr1:170726665|170726952 hsa-miR-548f 0 0 1
chr1:170726665|170726952 hsa-miR-516b 0 0 1
chr1:170726665|170726952 hsa-miR-184 1 0 0
chr1:170726665|170726952 hsa-miR-765 1 0 0
chr1:170726665|170726952 hsa-miR-1183 1 0 0
chr1:170726665|170726952 hsa-miR-3125 1 0 0
chr1:170726665|170726952 hsa-miR-3132 1 0 0
chr1:170726665|170726952 hsa-miR-3153 1 0 0
chr1:170726665|170726952 hsa-miR-3154 1 0 0
chr1:170726665|170726952 hsa-miR-3175 1 0 0
chr1:170726665|170726952 hsa-miR-3185 1 0 0
chr1:170726665|170726952 hsa-miR-4298 1 0 0
chr1:170726665|170726952 hsa-miR-4270 1 0 0
chr1:170726665|170726952 hsa-miR-3916 1 0 0
chr1:170726665|170726952 hsa-miR-4428 1 0 0
chr1:170726665|170726952 hsa-miR-4441 1 0 0
chr1:170726665|170726952 hsa-miR-4458 1 0 0
chr1:170726665|170726952 hsa-miR-4462 1 0 0
chr1:170726665|170726952 hsa-miR-4476 1 0 0
chr1:170726665|170726952 hsa-miR-4496 1 0 0
chr1:170726665|170726952 hsa-miR-4510 1 0 0
chr1:170726665|170726952 hsa-miR-4516 1 0 0
chr1:170726665|170726952 hsa-miR-4533 1 0 0
chr1:170726665|170726952 hsa-miR-4534 1 0 0
chr1:170726665|170726952 hsa-miR-4644 1 0 0
chr1:170726665|170726952 hsa-miR-4689 1 0 0
chr1:170726665|170726952 hsa-miR-4706 1 0 0
chr1:170726665|170726952 hsa-miR-4739 1 0 0
chr1:170726665|170726952 hsa-miR-4779 1 0 0
chr1:170726665|170726952 hsa-miR-4784 1 0 0
chr1:170726665|170726952 hsa-miR-5091 1 0 0
chr1:170726665|170726952 hsa-miR-5093 1 0 0
chr1:170726665|170726952 hsa-miR-5703 1 0 0
chr1:170726665|170726952 hsa-miR-5739 1 0 0
chr1:170726665|170726952 hsa-miR-6085 1 0 0
chr1:170726665|170726952 hsa-miR-6088 1 0 0
chr1:170726665|170726952 hsa-miR-6090 1 0 0
chr1:170726665|170726952 hsa-miR-6124 1 0 0
chr1:170726665|170726952 hsa-miR-6127 1 0 0
chr1:170726665|170726952 hsa-miR-6133 1 0 0
chr1:170726665|170726952 hsa-miR-6745 1 0 0
chr1:170726665|170726952 hsa-miR-7515 1 0 0
chr1:170726665|170726952 hsa-miR-8052 1 0 0
chr1:170726665|170726952 hsa-miR-8085 1 0 0
chr1:170726665|170726952 hsa-miR-8089 1 0 0
chr1:170726665|170726952 hsa-miR-12118 1 0 0
chr1:170726665|170726952 hsa-miR-12120 1 0 0
chr1:170726665|170726952 hsa-miR-6734-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6809-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3150a-3p 1 0 0
chr1:170726665|170726952 hsa-miR-7106-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6894-5p 1 0 0
chr1:170726665|170726952 hsa-miR-139-3p 1 0 0
chr1:170726665|170726952 hsa-miR-5187-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6757-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6873-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4695-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6746-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4722-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6730-5p 1 0 0
chr1:170726665|170726952 hsa-miR-197-5p 1 0 0
chr1:170726665|170726952 hsa-miR-7845-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3605-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3180-3p 1 0 0
chr1:170726665|170726952 hsa-miR-3190-3p 1 0 0
chr1:170726665|170726952 hsa-miR-6798-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3126-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6760-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3150b-3p 1 0 0
chr1:170726665|170726952 hsa-miR-5006-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4640-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6771-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3202 1 0 0
chr1:170726665|170726952 hsa-miR-6834-5p 1 0 0
chr1:170726665|170726952 hsa-miR-149-3p 1 0 0
chr1:170726665|170726952 hsa-miR-6830-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6824-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6789-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6878-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6877-5p 1 0 0
chr1:170726665|170726952 hsa-miR-423-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3191-3p 1 0 0
chr1:170726665|170726952 hsa-let-7e-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6832-5p 1 0 0
chr1:170726665|170726952 hsa-miR-483-5p 1 0 0
chr1:170726665|170726952 hsa-miR-1207-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4763-3p 1 0 0
chr1:170726665|170726952 hsa-miR-6778-5p 1 0 0
chr1:170726665|170726952 hsa-miR-1343-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6754-5p 1 0 0
chr1:170726665|170726952 hsa-miR-11181-3p 1 0 0
chr1:170726665|170726952 hsa-miR-1249-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6788-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6797-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6875-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6879-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4728-5p 1 0 0
chr1:170726665|170726952 hsa-miR-5196-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4726-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4749-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6735-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6794-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6795-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6883-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4436b-3p 1 0 0
chr1:170726665|170726952 hsa-miR-6831-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3199 1 0 0
chr1:170726665|170726952 hsa-miR-365a-5p 1 0 0
chr1:170726665|170726952 hsa-miR-365b-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6511a-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6731-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6758-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6856-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4665-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3173-3p 1 0 0
chr1:170726665|170726952 hsa-miR-4747-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6876-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6891-5p 1 0 0
chr1:170726665|170726952 hsa-miR-4716-3p 1 0 0
chr1:170726665|170726952 hsa-miR-6785-5p 1 0 0
chr1:170726665|170726952 hsa-miR-3184-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6529-5p 1 0 0
chr1:170726665|170726952 hsa-miR-6859-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:170726665|170726952
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence LAFLSSSLCHSPSRLSPSFLLSFLSSFLPSSFF
Nucleotide Sequence TTGGCTTTTCTTTCCTCCTCTCTCTGTCATAGTCCCTCTCGTCTCTCTCCTTCCTTCCTTCTTTCCTTTCTTTCTTCCTTCCTTCCTTCTTCCTTTTTTTAA
CircID chr1:170726665|170726952
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MQSLPLALYLEFYKLRPYICIIQRI
Nucleotide Sequence CTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCTACATTTGCATAATACAACGAATTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab