CircRNA Information

General Information
circRNA Basic Information
CircID chr1:171501042|171501273
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGCAGTCCCAGCTACTCAGGAGGCTGAGGCACGGAGGACTGCTTTGAGTCCAGGAGGTCAAAGCTGTAGTGAACCCTGTTCACACAGTAGCTCATGAGTAGTAACCCCAGCACCTTGGGAGGCCAAGTCAGGAGGATCACTTGAGCCCAGGAGTTCAAGACCAGACTGAACCGGTAGTGAGACCCTGTCTCTACAAAAATAAATAAACTAGCTGGGTATGGTGGCACACGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:171501042|171501273 hsa-miR-18a-5p 0 0 1
chr1:171501042|171501273 hsa-miR-18a-3p 0 0 1
chr1:171501042|171501273 hsa-miR-192-5p 0 0 1
chr1:171501042|171501273 hsa-miR-192-3p 0 0 1
chr1:171501042|171501273 hsa-miR-215-5p 0 0 1
chr1:171501042|171501273 hsa-miR-215-3p 0 0 1
chr1:171501042|171501273 hsa-miR-150-5p 0 0 1
chr1:171501042|171501273 hsa-miR-150-3p 0 0 1
chr1:171501042|171501273 hsa-miR-422a 0 1 1
chr1:171501042|171501273 hsa-miR-18b-5p 0 0 1
chr1:171501042|171501273 hsa-miR-18b-3p 0 0 1
chr1:171501042|171501273 hsa-miR-610 0 0 1
chr1:171501042|171501273 hsa-miR-622 0 0 1
chr1:171501042|171501273 hsa-miR-892a 0 0 1
chr1:171501042|171501273 hsa-miR-888-5p 0 0 1
chr1:171501042|171501273 hsa-miR-888-3p 0 0 1
chr1:171501042|171501273 hsa-miR-1182 0 0 1
chr1:171501042|171501273 hsa-miR-1227-5p 0 0 1
chr1:171501042|171501273 hsa-miR-1227-3p 0 0 1
chr1:171501042|171501273 hsa-miR-1200 0 0 1
chr1:171501042|171501273 hsa-miR-1288-5p 0 0 1
chr1:171501042|171501273 hsa-miR-1288-3p 0 0 1
chr1:171501042|171501273 hsa-miR-330-3p 0 0 1
chr1:171501042|171501273 hsa-miR-671-3p 0 1 1
chr1:171501042|171501273 hsa-miR-556-5p 0 0 1
chr1:171501042|171501273 hsa-miR-509-3-5p 0 0 1
chr1:171501042|171501273 hsa-miR-509-5p 0 0 1
chr1:171501042|171501273 hsa-miR-378 0 0 1
chr1:171501042|171501273 hsa-miR-1245 0 0 1
chr1:171501042|171501273 hsa-miR-637 1 0 0
chr1:171501042|171501273 hsa-miR-1303 1 1 0
chr1:171501042|171501273 hsa-miR-378b 0 1 0
chr1:171501042|171501273 hsa-miR-378c 0 1 0
chr1:171501042|171501273 hsa-miR-4274 0 1 0
chr1:171501042|171501273 hsa-miR-3909 1 0 0
chr1:171501042|171501273 hsa-miR-378e 0 1 0
chr1:171501042|171501273 hsa-miR-378f 0 1 0
chr1:171501042|171501273 hsa-miR-4452 1 1 0
chr1:171501042|171501273 hsa-miR-378i 0 1 0
chr1:171501042|171501273 hsa-miR-8052 0 1 0
chr1:171501042|171501273 hsa-miR-8079 0 1 0
chr1:171501042|171501273 hsa-miR-8089 1 0 0
chr1:171501042|171501273 hsa-miR-4731-5p 1 1 0
chr1:171501042|171501273 hsa-miR-6861-5p 0 1 0
chr1:171501042|171501273 hsa-miR-6793-5p 1 0 0
chr1:171501042|171501273 hsa-miR-615-3p 1 0 0
chr1:171501042|171501273 hsa-miR-939-3p 1 0 0
chr1:171501042|171501273 hsa-miR-4715-3p 0 1 0
chr1:171501042|171501273 hsa-miR-619-3p 1 0 0
chr1:171501042|171501273 hsa-miR-7113-3p 1 0 0
chr1:171501042|171501273 hsa-miR-3677-3p 1 0 0
chr1:171501042|171501273 hsa-miR-5585-3p 0 1 0
chr1:171501042|171501273 hsa-miR-3690 0 1 0
chr1:171501042|171501273 hsa-miR-6869-5p 0 1 0
chr1:171501042|171501273 hsa-miR-660-3p 0 1 0
chr1:171501042|171501273 hsa-miR-1910-5p 0 1 0
chr1:171501042|171501273 hsa-miR-6818-5p 0 1 0
chr1:171501042|171501273 hsa-miR-6814-5p 0 1 0
chr1:171501042|171501273 hsa-miR-3605-3p 0 1 0
chr1:171501042|171501273 hsa-miR-4524a-3p 0 1 0
chr1:171501042|171501273 hsa-miR-4524b-3p 0 1 0
chr1:171501042|171501273 hsa-miR-4763-3p 1 0 0
chr1:171501042|171501273 hsa-miR-6852-3p 0 1 0
chr1:171501042|171501273 hsa-miR-3620-5p 1 0 0
chr1:171501042|171501273 hsa-miR-6791-3p 0 1 0
chr1:171501042|171501273 hsa-miR-378a-3p 0 1 0
chr1:171501042|171501273 hsa-miR-6829-3p 1 1 0
chr1:171501042|171501273 hsa-miR-6783-3p 1 1 0
chr1:171501042|171501273 hsa-miR-619-5p 0 1 0
chr1:171501042|171501273 hsa-miR-6764-5p 1 0 0
chr1:171501042|171501273 hsa-miR-378d 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:171501042|171501273
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MGSSDPPDLASQGAGVTTHELLCEQGSLQL
Nucleotide Sequence CTGGGCTCAAGTGATCCTCCTGACTTGGCCTCCCAAGGTGCTGGGGTTACTACTCATGAGCTACTGTGTGAACAGGGTTCACTACAGCTTTGA

CircID chr1:171501042|171501273
ORF Type ORF2
Protein Length 50
Nucleotide Length 153
Protein Sequence MVLNSWAQVILLTWPPKVLGLLLMSYCVNRVHYSFDLLDSKQSSVPQPPE
Nucleotide Sequence CTGGTCTTGAACTCCTGGGCTCAAGTGATCCTCCTGACTTGGCCTCCCAAGGTGCTGGGGTTACTACTCATGAGCTACTGTGTGAACAGGGTTCACTACAGCTTTGACCTCCTGGACTCAAAGCAGTCCTCCGTGCCTCAGCCTCCTGAGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites