CircRNA Information

General Information
circRNA Basic Information
CircID chr1:172068819|172253682
Strand +
CircType exon
Host Gene ENSG00000197959.13;
Algorism CIRI2;
Sequence CTGGCAAACTTCCCCAGACTCTGCGAGGAAACGGAAAGGATTGTTGCTAACCACATTCGTGAGCGAGAAGGGAAGACAAAGGACCAGGTATTGCTATTGATTGACATTCAAGTCTCTTACATCAACACCAACCATGAAGACTTCATTGGCTTCGCAAATGCTCAGCAGAGGAGCAGTCAGGTTCACAAGAAAACCACAGTTGGAAATCAGGTGATTCGCAAGGGGTGGCTCACCATCAGCAACATTGGCATCATGAAAGGCGGCTCGAAGGGATACTGGTTCGTCCTTACTGCGGAAAGCTTGTCCTGGTATAAAGATGATGAGGAAAAAGAAAAGAAGTACATGCTTCCCTTGGACAACCTGAAAGTTCGGGATGTGGAAAAGAGCTTTATGTCTAGCAAGCACATCTTTGCACTCTTTAATACAGAGCAAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:172068819|172253682 hsa-miR-29a-5p 0 1 1
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr1:172068819|172253682 FBL 1 1 1
chr1:172068819|172253682 NOP58 0 0 3
chr1:172068819|172253682 ELAVL3 0 1 0
chr1:172068819|172253682 U2AF2 1 0 0
chr1:172068819|172253682 FUS 0 1 0
chr1:172068819|172253682 CPSF1 1 0 0
chr1:172068819|172253682 TAF15 1 0 0
chr1:172068819|172253682 DKC1 0 1 0
chr1:172068819|172253682 NUDT21 1 0 0
chr1:172068819|172253682 IGF2BP2 0 2 5
chr1:172068819|172253682 PTBP1 0 2 0
chr1:172068819|172253682 EIF4A3 0 0 7
chr1:172068819|172253682 AGO2 0 1 2