CircRNA Information

General Information
circRNA Basic Information
CircID chr1:175157243|175157371
Strand -
CircType exon
Host Gene ENSG00000235750.8;
Algorism CIRI2;
Sequence CTCATTGATGGAAAGTTCTGTAAGTGTTGCCAAGGAACATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGCCATCTGTTTTGCAAGCAAGGGTGAGACAGCCACATTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:175157243|175157371
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MMESSVSVAKEHQYIFPVAGTFEGVWSPRPSVLQARVRQPH
Nucleotide Sequence TTGATGGAAAGTTCTGTAAGTGTTGCCAAGGAACATCAGTATATTTTTCCTGTAGCTGGCACCTTTGAGGGAGTCTGGTCTCCAAGGCCATCTGTTTTGCAAGCAAGGGTGAGACAGCCACAT

CircID chr1:175157243|175157371
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MLAKQMALETRLPQRCQLQEKYTDVPWQHLQNFPSM
Nucleotide Sequence TTGCTTGCAAAACAGATGGCCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATGTTCCTTGGCAACACTTACAGAACTTTCCATCAATG

CircID chr1:175157243|175157371
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence MWLSHPCLQNRWPWRPDSLKGASYRKNILMFLGNTYRTFHQ
Nucleotide Sequence ATGTGGCTGTCTCACCCTTGCTTGCAAAACAGATGGCCTTGGAGACCAGACTCCCTCAAAGGTGCCAGCTACAGGAAAAATATACTGATGTTCCTTGGCAACACTTACAGAACTTTCCATCAATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites