CircRNA Information

General Information
circRNA Basic Information
CircID chr1:1756258|1756568
Strand -
CircType exon
Host Gene ENSG00000008130.14;
Algorism CIRI2;
Sequence CTGGAAAAGCGAGGAAGCGTACAGCAGCGTCCCGTCTCCCCCCAGGCAGATGATGAAGTCTATCTGATTGGAAATGTCATCATAATCTAGGAAACACAAAGCAAAACCAAGAAGAGGCTGTCACACAGTGGCCCCTCTGTGGCGCAGTGCGCAGACACCAATGACAAGGGCAACAGTGCCAGAAGCTTCCAATGGGGCGGGGAACTGTGCTGGAGAAACCAAGGACAGAGCTGCTGACAGCCCACCTTCTCGAAAGGTACAGAATTTCTTCTTCACTGCCCCAAAGCTTTCATCGCTGGCGATGGCAGGGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:1756258|1756568 hsa-miR-34a-5p 0 0 1
chr1:1756258|1756568 hsa-miR-34a-3p 0 0 1
chr1:1756258|1756568 hsa-miR-214-5p 0 0 1
chr1:1756258|1756568 hsa-miR-214-3p 0 0 1
chr1:1756258|1756568 hsa-miR-346 0 0 1
chr1:1756258|1756568 hsa-miR-384 0 0 1
chr1:1756258|1756568 hsa-miR-449a 0 0 1
chr1:1756258|1756568 hsa-miR-599 0 0 1
chr1:1756258|1756568 hsa-miR-616-5p 0 0 1
chr1:1756258|1756568 hsa-miR-616-3p 0 0 1
chr1:1756258|1756568 hsa-miR-632 0 1 1
chr1:1756258|1756568 hsa-miR-637 1 1 1
chr1:1756258|1756568 hsa-miR-646 0 0 1
chr1:1756258|1756568 hsa-miR-661 0 0 1
chr1:1756258|1756568 hsa-miR-449b-5p 0 0 1
chr1:1756258|1756568 hsa-miR-449b-3p 0 0 1
chr1:1756258|1756568 hsa-miR-766-5p 0 0 1
chr1:1756258|1756568 hsa-miR-766-3p 0 0 1
chr1:1756258|1756568 hsa-miR-892a 0 0 1
chr1:1756258|1756568 hsa-miR-874-5p 0 0 1
chr1:1756258|1756568 hsa-miR-874-3p 0 0 1
chr1:1756258|1756568 hsa-miR-541-5p 0 0 1
chr1:1756258|1756568 hsa-miR-541-3p 0 0 1
chr1:1756258|1756568 hsa-miR-922 0 0 1
chr1:1756258|1756568 hsa-miR-938 0 0 1
chr1:1756258|1756568 hsa-miR-1238-5p 0 0 1
chr1:1756258|1756568 hsa-miR-1238-3p 0 0 1
chr1:1756258|1756568 hsa-miR-1208 0 0 1
chr1:1756258|1756568 hsa-miR-1272 0 0 1
chr1:1756258|1756568 hsa-miR-1322 0 0 1
chr1:1756258|1756568 hsa-miR-671-5p 0 0 1
chr1:1756258|1756568 hsa-miR-486-3p 0 0 1
chr1:1756258|1756568 hsa-miR-423-5p 0 0 1
chr1:1756258|1756568 hsa-miR-654-5p 0 1 1
chr1:1756258|1756568 hsa-miR-483-5p 0 0 1
chr1:1756258|1756568 hsa-miR-338-3p 0 0 1
chr1:1756258|1756568 hsa-miR-34c-5p 0 0 1
chr1:1756258|1756568 hsa-miR-515-5p 0 0 1
chr1:1756258|1756568 hsa-miR-542-3p 0 0 1
chr1:1756258|1756568 hsa-miR-516a-3p 0 0 1
chr1:1756258|1756568 hsa-miR-1254 0 0 1
chr1:1756258|1756568 hsa-miR-581 0 1 0
chr1:1756258|1756568 hsa-miR-630 1 0 0
chr1:1756258|1756568 hsa-miR-3175 0 1 0
chr1:1756258|1756568 hsa-miR-4260 0 1 0
chr1:1756258|1756568 hsa-miR-4252 0 1 0
chr1:1756258|1756568 hsa-miR-4265 1 0 0
chr1:1756258|1756568 hsa-miR-3611 0 1 0
chr1:1756258|1756568 hsa-miR-4656 1 0 0
chr1:1756258|1756568 hsa-miR-4660 0 1 0
chr1:1756258|1756568 hsa-miR-4706 1 0 0
chr1:1756258|1756568 hsa-miR-4741 1 1 0
chr1:1756258|1756568 hsa-miR-6079 0 1 0
chr1:1756258|1756568 hsa-miR-6088 1 0 0
chr1:1756258|1756568 hsa-miR-7974 1 0 0
chr1:1756258|1756568 hsa-miR-8061 0 1 0
chr1:1756258|1756568 hsa-miR-8089 1 0 0
chr1:1756258|1756568 hsa-miR-4665-3p 1 0 0
chr1:1756258|1756568 hsa-miR-6825-5p 0 1 0
chr1:1756258|1756568 hsa-miR-139-3p 1 1 0
chr1:1756258|1756568 hsa-miR-4709-3p 0 1 0
chr1:1756258|1756568 hsa-miR-4677-5p 0 1 0
chr1:1756258|1756568 hsa-miR-7109-5p 1 1 0
chr1:1756258|1756568 hsa-miR-1226-5p 1 0 0
chr1:1756258|1756568 hsa-miR-4707-3p 1 0 0
chr1:1756258|1756568 hsa-miR-92b-5p 1 1 0
chr1:1756258|1756568 hsa-miR-149-3p 1 0 0
chr1:1756258|1756568 hsa-miR-6743-3p 1 0 0
chr1:1756258|1756568 hsa-miR-584-3p 0 1 0
chr1:1756258|1756568 hsa-miR-3617-3p 0 1 0
chr1:1756258|1756568 hsa-miR-6812-5p 1 0 0
chr1:1756258|1756568 hsa-miR-6816-5p 1 0 0
chr1:1756258|1756568 hsa-miR-6870-5p 1 1 0
chr1:1756258|1756568 hsa-miR-6775-5p 0 1 0
chr1:1756258|1756568 hsa-miR-5001-5p 1 0 0
chr1:1756258|1756568 hsa-miR-6756-5p 1 0 0
chr1:1756258|1756568 hsa-miR-6803-5p 1 0 0
chr1:1756258|1756568 hsa-miR-7107-5p 1 0 0
chr1:1756258|1756568 hsa-miR-6751-5p 1 0 0
chr1:1756258|1756568 hsa-miR-7111-5p 1 1 0
chr1:1756258|1756568 hsa-miR-328-5p 1 0 0
chr1:1756258|1756568 hsa-miR-6795-5p 1 1 0
chr1:1756258|1756568 hsa-miR-6887-5p 1 1 0
chr1:1756258|1756568 hsa-miR-3940-5p 1 0 0
chr1:1756258|1756568 hsa-miR-3184-5p 0 1 0
chr1:1756258|1756568 hsa-miR-6762-5p 1 1 0
chr1:1756258|1756568 hsa-miR-6727-3p 0 1 0
chr1:1756258|1756568 hsa-miR-6775-3p 1 0 0
chr1:1756258|1756568 hsa-miR-6817-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:1756258|1756568
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence LEKRGSVQQRPVSPQADDEVYLIGNVIII
Nucleotide Sequence CTGGAAAAGCGAGGAAGCGTACAGCAGCGTCCCGTCTCCCCCCAGGCAGATGATGAAGTCTATCTGATTGGAAATGTCATCATAATCTAG
CircID chr1:1756258|1756568
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MSHSGPSVAQCADTNDKGNSARSFQWGGELCWRNQGQSC
Nucleotide Sequence CTGTCACACAGTGGCCCCTCTGTGGCGCAGTGCGCAGACACCAATGACAAGGGCAACAGTGCCAGAAGCTTCCAATGGGGCGGGGAACTGTGCTGGAGAAACCAAGGACAGAGCTGCTGA
CircID chr1:1756258|1756568
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MWRSAQTPMTRATVPEASNGAGNCAGETKDRAADSPPSRKVQNFFFTAPKLSSLAMAG
Nucleotide Sequence CTGTGGCGCAGTGCGCAGACACCAATGACAAGGGCAACAGTGCCAGAAGCTTCCAATGGGGCGGGGAACTGTGCTGGAGAAACCAAGGACAGAGCTGCTGACAGCCCACCTTCTCGAAAGGTACAGAATTTCTTCTTCACTGCCCCAAAGCTTTCATCGCTGGCGATGGCAGGG
CircID chr1:1756258|1756568
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MGRGTVLEKPRTELLTAHLLERYRISSSLPQSFHRWRWQG
Nucleotide Sequence ATGGGGCGGGGAACTGTGCTGGAGAAACCAAGGACAGAGCTGCTGACAGCCCACCTTCTCGAAAGGTACAGAATTTCTTCTTCACTGCCCCAAAGCTTTCATCGCTGGCGATGGCAGGGT
CircID chr1:1756258|1756568
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MALLPLSLVSAHCATEGPLCDSLFLVLLCVS
Nucleotide Sequence CTGGCACTGTTGCCCTTGTCATTGGTGTCTGCGCACTGCGCCACAGAGGGGCCACTGTGTGACAGCCTCTTCTTGGTTTTGCTTTGTGTTTCCTAG
CircID chr1:1756258|1756568
ORF Type ORF6
Protein Length 60
Nucleotide Length 183
Protein Sequence MYLSRRWAVSSSVLGFSSTVPRPIGSFWHCCPCHWCLRTAPQRGHCVTASSWFCFVFPRL
Nucleotide Sequence CTGTACCTTTCGAGAAGGTGGGCTGTCAGCAGCTCTGTCCTTGGTTTCTCCAGCACAGTTCCCCGCCCCATTGGAAGCTTCTGGCACTGTTGCCCTTGTCATTGGTGTCTGCGCACTGCGCCACAGAGGGGCCACTGTGTGACAGCCTCTTCTTGGTTTTGCTTTGTGTTTCCTAGATTATGA
CircID chr1:1756258|1756568
ORF Type ORF7
Protein Length 39
Nucleotide Length 120
Protein Sequence MSAALSLVSPAQFPAPLEASGTVALVIGVCALRHRGATV
Nucleotide Sequence CTGTCAGCAGCTCTGTCCTTGGTTTCTCCAGCACAGTTCCCCGCCCCATTGGAAGCTTCTGGCACTGTTGCCCTTGTCATTGGTGTCTGCGCACTGCGCCACAGAGGGGCCACTGTGTGA
CircID chr1:1756258|1756568
ORF Type ORF8
Protein Length 33
Nucleotide Length 99
Protein Sequence MCFLDYDDISNQIDFIICLGGDGTLLYASSLFQ
Nucleotide Sequence TTGTGTTTCCTAGATTATGATGACATTTCCAATCAGATAGACTTCATCATCTGCCTGGGGGGAGACGGGACGCTGCTGTACGCTTCCTCGCTTTTCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab