CircNet

General Information

circRNA Basic Information

CircID	chr1:179117332\|179133374
Strand	-
CircType	exon
Host Gene	ENSG00000143322.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATCACTTTGCCAGCTGTGTGGAGGATGGATTTGAGGGAGACAAGACTGGAGGCAGTAGTCCAGAAGCTTTGCATCGTCCCTATGGTTGTGATGTTGAACCCCAGGCACTAAATGAGGCTATCAGGTGGAGCTCCAAGGAGAACTTGCTCGGAGCCACTGAGAGTGACCCTAATCTCTTCGTTGCACTTTATGATTTTGTAGCAAGTGGTGATAACACACTCAGCATCACTAAAGAGATCTTGCAGCTCGTAACTGCCTAGTGGGAGAAAACCATGTGGTAAAAGTGGCTGACTTTGGCTTAAGTAGATTGATGACTGGAGACACTTATACTGCTCATGCTGGAGCCAAATTTCCTATTAAGTGGACAGCACCAGAGAGTCTTGCCTACAATACCTTCTCAATTAAATCTGACGTCTGGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:179117332\|179133374	hsa-miR-181a-2-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:179117332\|179133374
ORF Type	ORF1
Protein Length	36
Nucleotide Length	108
Protein Sequence	MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVW
Nucleotide Sequence	ATGACTGGAGACACTTATACTGCTCATGCTGGAGCCAAATTTCCTATTAAGTGGACAGCACCAGAGAGTCTTGCCTACAATACCTTCTCAATTAAATCTGACGTCTGG

CircID	chr1:179117332\|179133374
ORF Type	ORF2
Protein Length	82
Nucleotide Length	246
Protein Sequence	EIWLQHEQYKCLQSSIYLSQSQPLLPHGFLPLGSYELQDLFSDAECVITTCYKIIKCNEEIRVTLSGSEQVLLGAPPDSLI*
Nucleotide Sequence	GAAATTTGGCTCCAGCATGAGCAGTATAAGTGTCTCCAGTCATCAATCTACTTAAGCCAAAGTCAGCCACTTTTACCACATGGTTTTCTCCCACTAGGCAGTTACGAGCTGCAAGATCTCTTTAGTGATGCTGAGTGTGTTATCACCACTTGCTACAAAATCATAAAGTGCAACGAAGAGATTAGGGTCACTCTCAGTGGCTCCGAGCAAGTTCTCCTTGGAGCTCCACCTGATAGCCTCATTTAG

CircID	chr1:179117332\|179133374
ORF Type	ORF3
Protein Length	81
Nucleotide Length	243
Protein Sequence	VEDGFEGDKTGGSSPEALHRPYGCDVEPQALNEAIRWSSKENLLGATESDPNLFVALYDFVASGDNTLSITKEILQLVTA*
Nucleotide Sequence	GTGGAGGATGGATTTGAGGGAGACAAGACTGGAGGCAGTAGTCCAGAAGCTTTGCATCGTCCCTATGGTTGTGATGTTGAACCCCAGGCACTAAATGAGGCTATCAGGTGGAGCTCCAAGGAGAACTTGCTCGGAGCCACTGAGAGTGACCCTAATCTCTTCGTTGCACTTTATGATTTTGTAGCAAGTGGTGATAACACACTCAGCATCACTAAAGAGATCTTGCAGCTCGTAACTGCCTAG

CircID	chr1:179117332\|179133374
ORF Type	ORF4
Protein Length	30
Nucleotide Length	90
Protein Sequence	MRLSGGAPRRTCSEPLRVTLISSLHFMIL*
Nucleotide Sequence	ATGAGGCTATCAGGTGGAGCTCCAAGGAGAACTTGCTCGGAGCCACTGAGAGTGACCCTAATCTCTTCGTTGCACTTTATGATTTTGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:179117332\|179133374	NOP56	1	0	0
chr1:179117332\|179133374	MOV10	18	0	3
chr1:179117332\|179133374	ELAVL1	27	9	3
chr1:179117332\|179133374	SF3B1	0	2	0
chr1:179117332\|179133374	PUM2	3	0	1
chr1:179117332\|179133374	PRPF8	0	2	2
chr1:179117332\|179133374	YTHDF1	1	4	0
chr1:179117332\|179133374	UPF1	6	1	0
chr1:179117332\|179133374	CAPRIN1	6	0	0
chr1:179117332\|179133374	FMR1	28	2	14
chr1:179117332\|179133374	CPSF6	4	2	0
chr1:179117332\|179133374	NUDT21	0	1	0
chr1:179117332\|179133374	CPSF4	1	0	0
chr1:179117332\|179133374	CPSF3	1	0	0
chr1:179117332\|179133374	CPSF1	0	1	1
chr1:179117332\|179133374	FUS	4	0	0
chr1:179117332\|179133374	CPSF7	3	1	0
chr1:179117332\|179133374	SRSF1	1	2	2
chr1:179117332\|179133374	NOP58	0	0	2
chr1:179117332\|179133374	SRSF3	0	1	0
chr1:179117332\|179133374	U2AF1	0	1	0
chr1:179117332\|179133374	EIF3A	0	1	0
chr1:179117332\|179133374	EIF3B	0	1	0
chr1:179117332\|179133374	U2AF2	2	14	3
chr1:179117332\|179133374	SRSF9	0	0	2
chr1:179117332\|179133374	DDX54	0	0	9
chr1:179117332\|179133374	EFTUD2	0	1	0
chr1:179117332\|179133374	HNRNPM	0	1	0
chr1:179117332\|179133374	FIP1L1	0	1	0
chr1:179117332\|179133374	PTBP1	22	2	2
chr1:179117332\|179133374	HNRNPC	38	19	11
chr1:179117332\|179133374	HNRNPA1	4	4	0
chr1:179117332\|179133374	DDX3X	17	20	0
chr1:179117332\|179133374	ZC3H7B	23	0	2
chr1:179117332\|179133374	ACIN1	0	0	2
chr1:179117332\|179133374	LIN28B	8	3	5
chr1:179117332\|179133374	RANGAP1	0	0	1
chr1:179117332\|179133374	FXR1	0	0	1
chr1:179117332\|179133374	FXR2	5	1	1
chr1:179117332\|179133374	IGF2BP1	3	0	1
chr1:179117332\|179133374	IGF2BP3	4	0	1
chr1:179117332\|179133374	IGF2BP2	9	2	3
chr1:179117332\|179133374	TARDBP	6	9	1
chr1:179117332\|179133374	YTHDC1	0	2	0
chr1:179117332\|179133374	BUD13	0	0	3
chr1:179117332\|179133374	CNBP	0	0	2
chr1:179117332\|179133374	YTHDF2	0	4	0
chr1:179117332\|179133374	RBM47	12	1	2
chr1:179117332\|179133374	CSTF2T	2	0	4
chr1:179117332\|179133374	SRRM4	0	1	0
chr1:179117332\|179133374	CSTF2	1	0	0
chr1:179117332\|179133374	TARBP2	0	1	0
chr1:179117332\|179133374	ILF3	0	1	0
chr1:179117332\|179133374	RTCB	0	1	0
chr1:179117332\|179133374	AGO2	1	1	6
chr1:179117332\|179133374	ATXN2	3	2	0
chr1:179117332\|179133374	EWSR1	3	0	0
chr1:179117332\|179133374	EIF4A3	0	1	4
chr1:179117332\|179133374	FBL	2	3	2

CircRNA Information