CircNet

General Information

circRNA Basic Information

CircID	chr1:180084018\|180090796
Strand	+
CircType	exon
Host Gene	ENSG00000135837.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	AAACTACATCTGACCAGAGTGATATTGAAGGTAGGATCAGAGCTCTGAAGGATGAGTTGCGGAAAAGAAAATCAGTTGTGAACCAGCTGAAGAAGGAACAGAAAAAAAGGCAAAAGGAAAGACTGAAAGCCCAAGAAGCCAGTCTGATCAAGCAGTTAGAGTCATATGATGAATTTATTAAGAAAACTGAAGCCGAGCTTAGCCAAGATTTGGAAACATCACCAACAGCCAAGCCTCAGATTAAAACGCTCTCCTCAGCTTCTGAAAAACCCAAGATCAAACCCCTCACACCACTACACAGATCTGAAACGGCAAAGAATTGGAAATCACTAACAGAGTCAGAACGTTCCAGAGGATCCCTGGAGTCTATTGCTGAACATGTTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:180084018\|180090796
ORF Type	ORF1
Protein Length	109
Nucleotide Length	327
Protein Sequence	LRKRKSVVNQLKKEQKKRQKERLKAQEASLIKQLESYDEFIKKTEAELSQDLETSPTAKPQIKTLSSASEKPKIKPLTPLHRSETAKNWKSLTESERSRGSLESIAEHV
Nucleotide Sequence	TTGCGGAAAAGAAAATCAGTTGTGAACCAGCTGAAGAAGGAACAGAAAAAAAGGCAAAAGGAAAGACTGAAAGCCCAAGAAGCCAGTCTGATCAAGCAGTTAGAGTCATATGATGAATTTATTAAGAAAACTGAAGCCGAGCTTAGCCAAGATTTGGAAACATCACCAACAGCCAAGCCTCAGATTAAAACGCTCTCCTCAGCTTCTGAAAAACCCAAGATCAAACCCCTCACACCACTACACAGATCTGAAACGGCAAAGAATTGGAAATCACTAACAGAGTCAGAACGTTCCAGAGGATCCCTGGAGTCTATTGCTGAACATGTT

CircID	chr1:180084018\|180090796
ORF Type	ORF2
Protein Length	56
Nucleotide Length	168
Protein Sequence	MMNLLRKLKPSLAKIWKHHQQPSLRLKRSPQLLKNPRSNPSHHYTDLKRQRIGNH*
Nucleotide Sequence	ATGATGAATTTATTAAGAAAACTGAAGCCGAGCTTAGCCAAGATTTGGAAACATCACCAACAGCCAAGCCTCAGATTAAAACGCTCTCCTCAGCTTCTGAAAAACCCAAGATCAAACCCCTCACACCACTACACAGATCTGAAACGGCAAAGAATTGGAAATCACTAA

CircID	chr1:180084018\|180090796
ORF Type	ORF3
Protein Length	77
Nucleotide Length	231
Protein Sequence	LAVGDVSKSWLSSASVFLINSSYDSNCLIRLASWAFSLSFCLFFCSFFSWFTTDFLFRNSSFRALILPSISLWSDVV
Nucleotide Sequence	TTGGCTGTTGGTGATGTTTCCAAATCTTGGCTAAGCTCGGCTTCAGTTTTCTTAATAAATTCATCATATGACTCTAACTGCTTGATCAGACTGGCTTCTTGGGCTTTCAGTCTTTCCTTTTGCCTTTTTTTCTGTTCCTTCTTCAGCTGGTTCACAACTGATTTTCTTTTCCGCAACTCATCCTTCAGAGCTCTGATCCTACCTTCAATATCACTCTGGTCAGATGTAGTT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:180084018\|180090796	UCHL5	2	0	0
chr1:180084018\|180090796	U2AF2	6	10	0
chr1:180084018\|180090796	ELAVL1	7	4	2
chr1:180084018\|180090796	CELF2	1	0	0
chr1:180084018\|180090796	CPSF7	1	0	0
chr1:180084018\|180090796	UPF1	0	2	0
chr1:180084018\|180090796	ZNF622	3	0	0
chr1:180084018\|180090796	CAPRIN1	1	0	0
chr1:180084018\|180090796	FMR1	5	0	5
chr1:180084018\|180090796	CPSF6	1	0	0
chr1:180084018\|180090796	NUDT21	3	0	0
chr1:180084018\|180090796	RBM15B	5	0	0
chr1:180084018\|180090796	FUS	1	1	0
chr1:180084018\|180090796	DGCR8	1	0	2
chr1:180084018\|180090796	SRSF1	2	0	2
chr1:180084018\|180090796	NOP58	1	1	2
chr1:180084018\|180090796	U2AF1	1	0	1
chr1:180084018\|180090796	NOP56	1	0	0
chr1:180084018\|180090796	DDX54	3	0	14
chr1:180084018\|180090796	GRWD1	1	0	0
chr1:180084018\|180090796	RBM10	0	1	0
chr1:180084018\|180090796	HNRNPA2B1	1	0	0
chr1:180084018\|180090796	FIP1L1	1	0	0
chr1:180084018\|180090796	PTBP1	1	0	2
chr1:180084018\|180090796	HNRNPC	2	17	5
chr1:180084018\|180090796	TRA2A	0	0	2
chr1:180084018\|180090796	DDX3X	3	0	0
chr1:180084018\|180090796	MSI2	0	0	1
chr1:180084018\|180090796	HNRNPA1	1	4	0
chr1:180084018\|180090796	LIN28B	1	0	0
chr1:180084018\|180090796	FXR1	0	0	1
chr1:180084018\|180090796	FXR2	0	0	1
chr1:180084018\|180090796	IGF2BP1	0	0	4
chr1:180084018\|180090796	IGF2BP2	2	0	6
chr1:180084018\|180090796	YTHDC1	3	0	0
chr1:180084018\|180090796	RBM47	1	0	4
chr1:180084018\|180090796	SLTM	0	0	1
chr1:180084018\|180090796	CSTF2T	0	1	3
chr1:180084018\|180090796	CSTF2	1	0	0
chr1:180084018\|180090796	RBM22	0	2	0
chr1:180084018\|180090796	XRN2	0	1	0
chr1:180084018\|180090796	AGO2	0	2	0
chr1:180084018\|180090796	AGO1	0	1	0
chr1:180084018\|180090796	EIF4A3	3	1	7
chr1:180084018\|180090796	FBL	1	0	2

CircRNA Information