CircRNA Information

General Information
circRNA Basic Information
CircID chr1:182383458|182383596
Strand -
CircType exon
Host Gene ENSG00000135821.15;
Algorism CIRI2;
Sequence GGAGATCAAGTGACTGCTAGTAACGTGTTGTCTGTTAACTAATCCAGTGCCCACCTTCTCCAGAGGGTGGGCAGGGCAGAAACCCAAAAGGGTCTTGAGGGCCTAATCCCAGATCACCATCTAAGAACCACTTCCCTTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:182383458|182383596 hsa-miR-629-5p 0 0 1
chr1:182383458|182383596 hsa-miR-629-3p 0 0 1
chr1:182383458|182383596 hsa-miR-874-5p 0 0 1
chr1:182383458|182383596 hsa-miR-874-3p 0 0 1
chr1:182383458|182383596 hsa-miR-541-5p 0 0 1
chr1:182383458|182383596 hsa-miR-541-3p 0 0 1
chr1:182383458|182383596 hsa-miR-1243 0 0 1
chr1:182383458|182383596 hsa-miR-140-5p 0 0 1
chr1:182383458|182383596 hsa-miR-146b-3p 0 0 1
chr1:182383458|182383596 hsa-miR-654-5p 0 0 1
chr1:182383458|182383596 hsa-miR-324-3p 0 0 1
chr1:182383458|182383596 hsa-miR-516b 0 0 1
chr1:182383458|182383596 hsa-miR-544 0 0 1
chr1:182383458|182383596 hsa-miR-1295 0 0 1
chr1:182383458|182383596 hsa-miR-1293 1 0 0
chr1:182383458|182383596 hsa-miR-3166 1 1 0
chr1:182383458|182383596 hsa-miR-4739 1 0 0
chr1:182383458|182383596 hsa-miR-5192 1 0 0
chr1:182383458|182383596 hsa-miR-9500 0 1 0
chr1:182383458|182383596 hsa-miR-18a-3p 0 1 0
chr1:182383458|182383596 hsa-miR-125b-1-3p 1 0 0
chr1:182383458|182383596 hsa-miR-7106-5p 1 0 0
chr1:182383458|182383596 hsa-miR-6822-3p 1 0 0
chr1:182383458|182383596 hsa-miR-6728-5p 1 0 0
chr1:182383458|182383596 hsa-miR-5008-5p 1 0 0
chr1:182383458|182383596 hsa-miR-6824-5p 1 0 0
chr1:182383458|182383596 hsa-miR-328-3p 1 0 0
chr1:182383458|182383596 hsa-miR-518c-5p 0 1 0
chr1:182383458|182383596 hsa-miR-3173-5p 0 1 0
chr1:182383458|182383596 hsa-miR-2116-5p 0 1 0
chr1:182383458|182383596 hsa-miR-6839-3p 0 1 0
chr1:182383458|182383596 hsa-miR-1343-5p 1 0 0
chr1:182383458|182383596 hsa-miR-6743-5p 1 0 0
chr1:182383458|182383596 hsa-miR-6754-5p 1 0 0
chr1:182383458|182383596 hsa-miR-6851-5p 1 0 0
chr1:182383458|182383596 hsa-miR-6763-5p 1 0 0
chr1:182383458|182383596 hsa-miR-3620-5p 1 0 0
chr1:182383458|182383596 hsa-miR-6889-5p 1 0 0
chr1:182383458|182383596 hsa-miR-6775-3p 1 0 0
chr1:182383458|182383596 hsa-miR-619-5p 0 1 0
chr1:182383458|182383596 hsa-miR-6839-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:182383458|182383596
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MLVTCCLLTNPVPTFSRGWAGQKPKRVLRA
Nucleotide Sequence CTGCTAGTAACGTGTTGTCTGTTAACTAATCCAGTGCCCACCTTCTCCAGAGGGTGGGCAGGGCAGAAACCCAAAAGGGTCTTGAGGGCCTAA

CircID chr1:182383458|182383596
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MGLGPQDPFGFLPCPPSGEGGHWIS
Nucleotide Sequence CTGGGATTAGGCCCTCAAGACCCTTTTGGGTTTCTGCCCTGCCCACCCTCTGGAGAAGGTGGGCACTGGATTAGTTAA

CircID chr1:182383458|182383596
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MGFCPAHPLEKVGTGLVNRQHVTSSHLIS
Nucleotide Sequence TTGGGTTTCTGCCCTGCCCACCCTCTGGAGAAGGTGGGCACTGGATTAGTTAACAGACAACACGTTACTAGCAGTCACTTGATCTCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites