CircRNA Information

General Information
circRNA Basic Information
CircID chr1:182887146|182887264
Strand +
CircType exon
Host Gene ENSG00000135829.15;
Algorism CIRI2;
Sequence CAACACCTGCACCATATCCTGCCCGAAAGGAGTTGGCGCTGCCACCATAGCCTCCGCTACCATAGCCTCCACTGCTATAGCCACCGCCATAGCCTCCACCACTGTAACTAGAACCTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:182887146|182887264 hsa-miR-650 1 0 1
chr1:182887146|182887264 hsa-miR-652-5p 0 0 1
chr1:182887146|182887264 hsa-miR-652-3p 0 0 1
chr1:182887146|182887264 hsa-miR-657 0 0 1
chr1:182887146|182887264 hsa-miR-658 0 0 1
chr1:182887146|182887264 hsa-miR-885-3p 1 0 1
chr1:182887146|182887264 hsa-miR-582-5p 0 0 1
chr1:182887146|182887264 hsa-miR-637 1 0 0
chr1:182887146|182887264 hsa-miR-760 1 0 0
chr1:182887146|182887264 hsa-miR-1265 0 1 0
chr1:182887146|182887264 hsa-miR-3137 0 1 0
chr1:182887146|182887264 hsa-miR-3141 1 0 0
chr1:182887146|182887264 hsa-miR-3147 1 0 0
chr1:182887146|182887264 hsa-miR-3181 1 0 0
chr1:182887146|182887264 hsa-miR-3188 1 0 0
chr1:182887146|182887264 hsa-miR-4443 0 1 0
chr1:182887146|182887264 hsa-miR-4447 1 1 0
chr1:182887146|182887264 hsa-miR-4466 1 0 0
chr1:182887146|182887264 hsa-miR-4467 1 0 0
chr1:182887146|182887264 hsa-miR-4514 1 0 0
chr1:182887146|182887264 hsa-miR-1587 1 0 0
chr1:182887146|182887264 hsa-miR-3960 1 0 0
chr1:182887146|182887264 hsa-miR-4710 1 0 0
chr1:182887146|182887264 hsa-miR-5787 1 0 0
chr1:182887146|182887264 hsa-miR-6081 1 0 0
chr1:182887146|182887264 hsa-miR-6860 1 0 0
chr1:182887146|182887264 hsa-miR-8074 0 1 0
chr1:182887146|182887264 hsa-miR-12114 1 0 0
chr1:182887146|182887264 hsa-miR-12115 1 1 0
chr1:182887146|182887264 hsa-miR-12127 1 0 0
chr1:182887146|182887264 hsa-miR-6765-5p 1 0 0
chr1:182887146|182887264 hsa-miR-4687-3p 1 0 0
chr1:182887146|182887264 hsa-miR-6515-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6880-5p 1 0 0
chr1:182887146|182887264 hsa-miR-7847-3p 1 1 0
chr1:182887146|182887264 hsa-miR-4722-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6741-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6721-5p 1 1 0
chr1:182887146|182887264 hsa-miR-6793-5p 1 0 0
chr1:182887146|182887264 hsa-miR-2467-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6782-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6786-5p 1 0 0
chr1:182887146|182887264 hsa-miR-3944-3p 1 0 0
chr1:182887146|182887264 hsa-miR-6771-5p 1 0 0
chr1:182887146|182887264 hsa-miR-4743-5p 1 0 0
chr1:182887146|182887264 hsa-miR-4787-5p 1 0 0
chr1:182887146|182887264 hsa-miR-149-3p 1 0 0
chr1:182887146|182887264 hsa-miR-6824-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6781-5p 1 0 0
chr1:182887146|182887264 hsa-miR-7112-5p 1 1 0
chr1:182887146|182887264 hsa-miR-597-3p 1 0 0
chr1:182887146|182887264 hsa-miR-4750-5p 1 0 0
chr1:182887146|182887264 hsa-miR-10400-5p 1 0 0
chr1:182887146|182887264 hsa-miR-1207-5p 1 0 0
chr1:182887146|182887264 hsa-miR-4763-3p 1 1 0
chr1:182887146|182887264 hsa-miR-6787-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6816-5p 1 0 0
chr1:182887146|182887264 hsa-miR-5001-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6756-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6803-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6851-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6774-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6879-5p 1 0 0
chr1:182887146|182887264 hsa-miR-3620-5p 1 0 0
chr1:182887146|182887264 hsa-miR-1237-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6846-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6848-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6883-5p 1 0 0
chr1:182887146|182887264 hsa-miR-3187-5p 1 0 0
chr1:182887146|182887264 hsa-miR-4436b-3p 1 0 0
chr1:182887146|182887264 hsa-miR-3679-5p 1 1 0
chr1:182887146|182887264 hsa-miR-6849-5p 1 0 0
chr1:182887146|182887264 hsa-miR-6762-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:182887146|182887264
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MHHILPERSWRCHHSLRYHSLHCYSHRHSLHHCN
Nucleotide Sequence CTGCACCATATCCTGCCCGAAAGGAGTTGGCGCTGCCACCATAGCCTCCGCTACCATAGCCTCCACTGCTATAGCCACCGCCATAGCCTCCACCACTGTAACTAG
CircID chr1:182887146|182887264
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MAVAIAVEAMVAEAMVAAPTPFGQDMVQVL
Nucleotide Sequence ATGGCGGTGGCTATAGCAGTGGAGGCTATGGTAGCGGAGGCTATGGTGGCAGCGCCAACTCCTTTCGGGCAGGATATGGTGCAGGTGTTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab