CircRNA Information

General Information
circRNA Basic Information
CircID chr1:186307990|186308267
Strand -
CircType exon
Host Gene ENSG00000116690.10;
Algorism CIRI2;
Sequence TGCTCCAACTACCCCTAAGGAGCCTGCTCCAACTACCCCTAAGGAGCCTGCTCCAACTACCCCTAAGGGGACTGCTCCAACTACCCTCAAGGAACCTGCACCCACTACTCCCAAGAAGCCTGCCCCCAAGGAGCTTGCACCCACCACCACCAAGGGGCCCACATCCACCACCTCTGACAAGCCTGCTCCAACTACACCTAAGGAGACTGCTCCAACTACCCCCAAGGAGCCTGCACCCACTACCCCCAAGAAGCCTGCTCCAACTACTCCTGAGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:186307990|186308267 hsa-miR-484 0 0 1
chr1:186307990|186308267 hsa-miR-635 0 0 1
chr1:186307990|186308267 hsa-miR-657 1 0 1
chr1:186307990|186308267 hsa-miR-541-5p 0 0 1
chr1:186307990|186308267 hsa-miR-541-3p 0 0 1
chr1:186307990|186308267 hsa-miR-1266-5p 0 0 1
chr1:186307990|186308267 hsa-miR-1266-3p 0 0 1
chr1:186307990|186308267 hsa-miR-1275 1 0 1
chr1:186307990|186308267 hsa-miR-296-5p 0 0 1
chr1:186307990|186308267 hsa-miR-486-3p 1 0 1
chr1:186307990|186308267 hsa-miR-299-3p 0 0 1
chr1:186307990|186308267 hsa-miR-654-5p 0 0 1
chr1:186307990|186308267 hsa-miR-502-5p 0 0 1
chr1:186307990|186308267 hsa-miR-876-3p 0 0 1
chr1:186307990|186308267 hsa-miR-1244 1 1 1
chr1:186307990|186308267 hsa-miR-323-5p 0 0 1
chr1:186307990|186308267 hsa-miR-608 1 1 0
chr1:186307990|186308267 hsa-miR-622 1 0 0
chr1:186307990|186308267 hsa-miR-637 1 0 0
chr1:186307990|186308267 hsa-miR-650 1 0 0
chr1:186307990|186308267 hsa-miR-1293 0 1 0
chr1:186307990|186308267 hsa-miR-1268a 1 0 0
chr1:186307990|186308267 hsa-miR-3141 1 0 0
chr1:186307990|186308267 hsa-miR-3155a 1 1 0
chr1:186307990|186308267 hsa-miR-3196 1 0 0
chr1:186307990|186308267 hsa-miR-4296 1 0 0
chr1:186307990|186308267 hsa-miR-4298 1 0 0
chr1:186307990|186308267 hsa-miR-4322 1 1 0
chr1:186307990|186308267 hsa-miR-4257 1 1 0
chr1:186307990|186308267 hsa-miR-4259 1 0 0
chr1:186307990|186308267 hsa-miR-4260 1 0 0
chr1:186307990|186308267 hsa-miR-4253 1 0 0
chr1:186307990|186308267 hsa-miR-4265 1 0 0
chr1:186307990|186308267 hsa-miR-4274 0 1 0
chr1:186307990|186308267 hsa-miR-4280 1 0 0
chr1:186307990|186308267 hsa-miR-3911 1 0 0
chr1:186307990|186308267 hsa-miR-1268b 1 0 0
chr1:186307990|186308267 hsa-miR-4448 1 1 0
chr1:186307990|186308267 hsa-miR-3135b 1 0 0
chr1:186307990|186308267 hsa-miR-4466 1 0 0
chr1:186307990|186308267 hsa-miR-3155b 1 1 0
chr1:186307990|186308267 hsa-miR-4481 1 0 0
chr1:186307990|186308267 hsa-miR-4488 1 0 0
chr1:186307990|186308267 hsa-miR-4489 1 0 0
chr1:186307990|186308267 hsa-miR-4498 1 0 0
chr1:186307990|186308267 hsa-miR-4531 1 0 0
chr1:186307990|186308267 hsa-miR-4651 1 1 0
chr1:186307990|186308267 hsa-miR-4688 1 0 0
chr1:186307990|186308267 hsa-miR-4721 1 0 0
chr1:186307990|186308267 hsa-miR-4736 1 0 0
chr1:186307990|186308267 hsa-miR-5090 1 0 0
chr1:186307990|186308267 hsa-miR-5194 0 1 0
chr1:186307990|186308267 hsa-miR-5572 1 0 0
chr1:186307990|186308267 hsa-miR-6081 1 1 0
chr1:186307990|186308267 hsa-miR-6090 1 0 0
chr1:186307990|186308267 hsa-miR-6131 1 0 0
chr1:186307990|186308267 hsa-miR-6134 1 1 0
chr1:186307990|186308267 hsa-miR-6165 1 0 0
chr1:186307990|186308267 hsa-miR-12114 1 0 0
chr1:186307990|186308267 hsa-miR-103a-2-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4433b-3p 1 0 0
chr1:186307990|186308267 hsa-miR-510-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4433a-3p 1 1 0
chr1:186307990|186308267 hsa-miR-7106-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6825-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6894-5p 1 0 0
chr1:186307990|186308267 hsa-miR-8071 1 0 0
chr1:186307990|186308267 hsa-miR-1227-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6880-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6746-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6741-5p 1 1 0
chr1:186307990|186308267 hsa-miR-6727-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6806-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6721-5p 1 1 0
chr1:186307990|186308267 hsa-miR-197-5p 1 0 0
chr1:186307990|186308267 hsa-miR-8069 1 0 0
chr1:186307990|186308267 hsa-miR-5589-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6776-5p 1 0 0
chr1:186307990|186308267 hsa-miR-432-5p 0 1 0
chr1:186307990|186308267 hsa-miR-6716-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6871-5p 1 0 0
chr1:186307990|186308267 hsa-miR-3151-5p 1 0 0
chr1:186307990|186308267 hsa-miR-3180-3p 1 0 0
chr1:186307990|186308267 hsa-miR-6748-5p 0 1 0
chr1:186307990|186308267 hsa-miR-6772-5p 1 1 0
chr1:186307990|186308267 hsa-miR-6793-5p 1 0 0
chr1:186307990|186308267 hsa-miR-185-3p 1 0 0
chr1:186307990|186308267 hsa-miR-6805-5p 0 1 0
chr1:186307990|186308267 hsa-miR-23a-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6798-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6782-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6835-5p 1 1 0
chr1:186307990|186308267 hsa-miR-7109-5p 1 0 0
chr1:186307990|186308267 hsa-miR-1226-5p 1 0 0
chr1:186307990|186308267 hsa-miR-1229-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4640-5p 1 0 0
chr1:186307990|186308267 hsa-miR-3691-5p 0 1 0
chr1:186307990|186308267 hsa-miR-3127-5p 1 0 0
chr1:186307990|186308267 hsa-miR-1228-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6771-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4690-5p 1 1 0
chr1:186307990|186308267 hsa-miR-92b-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6749-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6847-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6824-5p 1 1 0
chr1:186307990|186308267 hsa-miR-3162-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6800-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4715-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4776-5p 1 0 0
chr1:186307990|186308267 hsa-miR-3189-3p 1 1 0
chr1:186307990|186308267 hsa-miR-7112-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6869-5p 1 1 0
chr1:186307990|186308267 hsa-miR-4727-3p 0 1 0
chr1:186307990|186308267 hsa-miR-188-5p 1 0 0
chr1:186307990|186308267 hsa-miR-3664-3p 1 1 0
chr1:186307990|186308267 hsa-miR-10400-5p 1 0 0
chr1:186307990|186308267 hsa-miR-1207-5p 1 0 0
chr1:186307990|186308267 hsa-miR-1273h-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4763-3p 1 0 0
chr1:186307990|186308267 hsa-miR-6769b-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6816-5p 1 0 0
chr1:186307990|186308267 hsa-miR-3180 1 0 0
chr1:186307990|186308267 hsa-miR-6737-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6743-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6752-5p 1 1 0
chr1:186307990|186308267 hsa-miR-6756-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6769a-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6803-5p 1 1 0
chr1:186307990|186308267 hsa-miR-6819-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6851-5p 1 0 0
chr1:186307990|186308267 hsa-miR-7110-5p 1 0 0
chr1:186307990|186308267 hsa-miR-10401-5p 1 0 0
chr1:186307990|186308267 hsa-miR-11181-3p 1 0 0
chr1:186307990|186308267 hsa-miR-6722-3p 1 0 0
chr1:186307990|186308267 hsa-miR-6751-5p 1 1 0
chr1:186307990|186308267 hsa-miR-6763-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6779-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6788-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6879-5p 1 0 0
chr1:186307990|186308267 hsa-miR-7111-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6780b-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6862-5p 1 0 0
chr1:186307990|186308267 hsa-miR-1237-5p 1 0 0
chr1:186307990|186308267 hsa-miR-328-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4725-3p 1 0 0
chr1:186307990|186308267 hsa-miR-6738-5p 1 1 0
chr1:186307990|186308267 hsa-miR-675-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6846-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6848-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4436b-3p 1 0 0
chr1:186307990|186308267 hsa-miR-4697-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6885-5p 1 0 0
chr1:186307990|186308267 hsa-miR-30c-1-3p 1 0 0
chr1:186307990|186308267 hsa-miR-6736-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6785-5p 1 0 0
chr1:186307990|186308267 hsa-miR-4667-5p 1 0 0
chr1:186307990|186308267 hsa-miR-6724-5p 1 1 0
chr1:186307990|186308267 hsa-miR-6791-5p 1 0 0
chr1:186307990|186308267 hsa-miR-10400-3p 1 0 0
chr1:186307990|186308267 hsa-miR-3619-5p 1 0 0
chr1:186307990|186308267 hsa-miR-103a-1-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:186307990|186308267
ORF Type ORF1
Protein Length 85
Nucleotide Length 255
Protein Sequence MLQLPLRSLLQLPLRGLLQLPSRNLHPLLPRSLPPRSLHPPPPRGPHPPPLTSLLQLHLRRLLQLPPRSLHPLPPRSLLQLLLRH
Nucleotide Sequence CTGCTCCAACTACCCCTAAGGAGCCTGCTCCAACTACCCCTAAGGGGACTGCTCCAACTACCCTCAAGGAACCTGCACCCACTACTCCCAAGAAGCCTGCCCCCAAGGAGCTTGCACCCACCACCACCAAGGGGCCCACATCCACCACCTCTGACAAGCCTGCTCCAACTACACCTAAGGAGACTGCTCCAACTACCCCCAAGGAGCCTGCACCCACTACCCCCAAGAAGCCTGCTCCAACTACTCCTGAGACAC
CircID chr1:186307990|186308267
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MEQACQRWWMWAPWWWWVQAPWGQASWE
Nucleotide Sequence TTGGAGCAGGCTTGTCAGAGGTGGTGGATGTGGGCCCCTTGGTGGTGGTGGGTGCAAGCTCCTTGGGGGCAGGCTTCTTGGGAGTAG
CircID chr1:186307990|186308267
ORF Type ORF3
Protein Length 83
Nucleotide Length 249
Protein Sequence MGVVGAGSLGVVGAVSLGVVGAGLSEVVDVGPLVVVGASSLGAGFLGVVGAGSLRVVGAVPLGVVGAGSLGVVGAGSLGVVGA
Nucleotide Sequence TTGGGGGTAGTGGGTGCAGGCTCCTTGGGGGTAGTTGGAGCAGTCTCCTTAGGTGTAGTTGGAGCAGGCTTGTCAGAGGTGGTGGATGTGGGCCCCTTGGTGGTGGTGGGTGCAAGCTCCTTGGGGGCAGGCTTCTTGGGAGTAGTGGGTGCAGGTTCCTTGAGGGTAGTTGGAGCAGTCCCCTTAGGGGTAGTTGGAGCAGGCTCCTTAGGGGTAGTTGGAGCAGGCTCCTTAGGGGTAGTTGGAGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab