CircRNA Information

General Information
circRNA Basic Information
CircID chr1:186325815|186326186
Strand -
CircType exon
Host Gene ENSG00000047410.12;
Algorism CIRI2;
Sequence TTTCTTCTGTTTCTGTACCTGGATCAGTCCCATCACCACCCTCAGCATCATCAGCTTCATAACCATCATTGCCATCGGCACTACCAGTTCCTTCATTACTATCTTCACCCTCATCTCCCATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:186325815|186326186 hsa-miR-143-5p 0 0 1
chr1:186325815|186326186 hsa-miR-143-3p 0 0 1
chr1:186325815|186326186 hsa-miR-519e-5p 0 0 1
chr1:186325815|186326186 hsa-miR-519e-3p 0 0 1
chr1:186325815|186326186 hsa-miR-640 0 1 1
chr1:186325815|186326186 hsa-miR-1293 1 1 1
chr1:186325815|186326186 hsa-miR-1252-5p 0 0 1
chr1:186325815|186326186 hsa-miR-1252-3p 0 0 1
chr1:186325815|186326186 hsa-miR-1322 1 1 1
chr1:186325815|186326186 hsa-miR-127-5p 0 0 1
chr1:186325815|186326186 hsa-miR-515-3p 0 0 1
chr1:186325815|186326186 hsa-miR-582-3p 0 0 1
chr1:186325815|186326186 hsa-miR-371-3p 0 0 1
chr1:186325815|186326186 hsa-miR-449a 1 0 0
chr1:186325815|186326186 hsa-miR-608 1 1 0
chr1:186325815|186326186 hsa-miR-765 1 0 0
chr1:186325815|186326186 hsa-miR-920 1 0 0
chr1:186325815|186326186 hsa-miR-1262 1 0 0
chr1:186325815|186326186 hsa-miR-1268a 1 0 0
chr1:186325815|186326186 hsa-miR-1270 1 0 0
chr1:186325815|186326186 hsa-miR-1275 1 0 0
chr1:186325815|186326186 hsa-miR-1321 1 0 0
chr1:186325815|186326186 hsa-miR-3132 1 0 0
chr1:186325815|186326186 hsa-miR-4298 1 0 0
chr1:186325815|186326186 hsa-miR-4271 1 0 0
chr1:186325815|186326186 hsa-miR-1268b 1 0 0
chr1:186325815|186326186 hsa-miR-4478 1 0 0
chr1:186325815|186326186 hsa-miR-3689c 1 0 0
chr1:186325815|186326186 hsa-miR-4502 1 1 0
chr1:186325815|186326186 hsa-miR-4525 1 0 0
chr1:186325815|186326186 hsa-miR-4534 1 0 0
chr1:186325815|186326186 hsa-miR-4647 1 0 0
chr1:186325815|186326186 hsa-miR-4651 1 0 0
chr1:186325815|186326186 hsa-miR-4656 1 0 0
chr1:186325815|186326186 hsa-miR-4658 1 0 0
chr1:186325815|186326186 hsa-miR-4689 1 0 0
chr1:186325815|186326186 hsa-miR-4710 1 0 0
chr1:186325815|186326186 hsa-miR-4739 1 0 0
chr1:186325815|186326186 hsa-miR-5093 1 0 0
chr1:186325815|186326186 hsa-miR-5787 1 0 0
chr1:186325815|186326186 hsa-miR-6088 1 0 0
chr1:186325815|186326186 hsa-miR-6131 1 0 0
chr1:186325815|186326186 hsa-miR-6133 1 0 0
chr1:186325815|186326186 hsa-miR-6745 1 0 0
chr1:186325815|186326186 hsa-miR-8052 1 1 0
chr1:186325815|186326186 hsa-miR-8060 1 0 0
chr1:186325815|186326186 hsa-miR-8075 1 1 0
chr1:186325815|186326186 hsa-miR-8077 1 0 0
chr1:186325815|186326186 hsa-miR-8085 1 0 0
chr1:186325815|186326186 hsa-miR-9718 1 0 0
chr1:186325815|186326186 hsa-miR-12114 1 0 0
chr1:186325815|186326186 hsa-miR-12119 1 0 0
chr1:186325815|186326186 hsa-miR-12120 1 1 0
chr1:186325815|186326186 hsa-miR-138-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6734-5p 1 0 0
chr1:186325815|186326186 hsa-miR-4731-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6765-5p 1 0 0
chr1:186325815|186326186 hsa-miR-7106-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6825-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6894-5p 1 0 0
chr1:186325815|186326186 hsa-miR-4687-3p 1 0 0
chr1:186325815|186326186 hsa-miR-125a-3p 1 0 0
chr1:186325815|186326186 hsa-miR-6799-5p 1 0 0
chr1:186325815|186326186 hsa-miR-766-5p 1 1 0
chr1:186325815|186326186 hsa-miR-6804-5p 1 1 0
chr1:186325815|186326186 hsa-miR-5187-5p 1 1 0
chr1:186325815|186326186 hsa-miR-6880-5p 1 0 0
chr1:186325815|186326186 hsa-miR-4709-3p 1 0 0
chr1:186325815|186326186 hsa-miR-7160-5p 1 0 0
chr1:186325815|186326186 hsa-miR-197-5p 1 0 0
chr1:186325815|186326186 hsa-miR-8069 1 1 0
chr1:186325815|186326186 hsa-miR-6871-5p 1 1 0
chr1:186325815|186326186 hsa-miR-1292-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6748-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6772-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6732-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6760-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6782-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6874-5p 1 0 0
chr1:186325815|186326186 hsa-miR-30b-3p 1 0 0
chr1:186325815|186326186 hsa-miR-1226-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6834-5p 1 0 0
chr1:186325815|186326186 hsa-miR-4787-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6717-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6878-5p 1 0 0
chr1:186325815|186326186 hsa-miR-4740-5p 1 1 0
chr1:186325815|186326186 hsa-miR-5010-5p 1 0 0
chr1:186325815|186326186 hsa-miR-7152-3p 1 0 0
chr1:186325815|186326186 hsa-miR-4652-5p 1 0 0
chr1:186325815|186326186 hsa-miR-873-3p 1 0 0
chr1:186325815|186326186 hsa-miR-1207-5p 1 0 0
chr1:186325815|186326186 hsa-miR-1233-5p 1 0 0
chr1:186325815|186326186 hsa-miR-1273h-5p 1 0 0
chr1:186325815|186326186 hsa-miR-3689b-3p 1 0 0
chr1:186325815|186326186 hsa-miR-6769b-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6778-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6812-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6870-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6726-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6737-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6752-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6756-5p 1 1 0
chr1:186325815|186326186 hsa-miR-6803-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6813-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6842-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6851-5p 1 0 0
chr1:186325815|186326186 hsa-miR-7110-5p 1 0 0
chr1:186325815|186326186 hsa-miR-1249-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6751-5p 1 1 0
chr1:186325815|186326186 hsa-miR-6779-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6780a-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6788-5p 1 1 0
chr1:186325815|186326186 hsa-miR-7111-5p 1 0 0
chr1:186325815|186326186 hsa-miR-4728-5p 1 0 0
chr1:186325815|186326186 hsa-miR-3689a-3p 1 0 0
chr1:186325815|186326186 hsa-miR-4649-5p 1 0 0
chr1:186325815|186326186 hsa-miR-4701-3p 1 0 0
chr1:186325815|186326186 hsa-miR-6729-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6846-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6848-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6883-5p 1 0 0
chr1:186325815|186326186 hsa-miR-3199 1 1 0
chr1:186325815|186326186 hsa-miR-4769-5p 1 0 0
chr1:186325815|186326186 hsa-miR-34b-5p 1 0 0
chr1:186325815|186326186 hsa-miR-365a-5p 1 0 0
chr1:186325815|186326186 hsa-miR-365b-5p 1 0 0
chr1:186325815|186326186 hsa-miR-30c-1-3p 1 0 0
chr1:186325815|186326186 hsa-miR-6731-5p 1 0 0
chr1:186325815|186326186 hsa-miR-4665-5p 1 0 0
chr1:186325815|186326186 hsa-miR-3679-5p 1 0 0
chr1:186325815|186326186 hsa-miR-4716-3p 1 0 0
chr1:186325815|186326186 hsa-miR-9851-5p 1 0 0
chr1:186325815|186326186 hsa-miR-6884-5p 1 0 0
chr1:186325815|186326186 hsa-miR-33b-3p 1 0 0
chr1:186325815|186326186 hsa-miR-449b-5p 1 0 0
chr1:186325815|186326186 hsa-miR-363-5p 1 0 0
chr1:186325815|186326186 hsa-miR-34c-5p 1 0 0
chr1:186325815|186326186 hsa-miR-3913-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:186325815|186326186
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MFLYLDQSHHHPQHHQLHNHHCHRHYQFLHYYLHPHLPS
Nucleotide Sequence CTGTTTCTGTACCTGGATCAGTCCCATCACCACCCTCAGCATCATCAGCTTCATAACCATCATTGCCATCGGCACTACCAGTTCCTTCATTACTATCTTCACCCTCATCTCCCATCC
CircID chr1:186325815|186326186
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MRVKIVMKELVVPMAMMVMKLMMLRVVMGLIQVQKQKK
Nucleotide Sequence ATGAGGGTGAAGATAGTAATGAAGGAACTGGTAGTGCCGATGGCAATGATGGTTATGAAGCTGATGATGCTGAGGGTGGTGATGGGACTGATCCAGGTACAGAAACAGAAGAAA
CircID chr1:186325815|186326186
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEE
Nucleotide Sequence ATGGGAGATGAGGGTGAAGATAGTAATGAAGGAACTGGTAGTGCCGATGGCAATGATGGTTATGAAGCTGATGATGCTGAGGGTGGTGATGGGACTGATCCAGGTACAGAAACAGAAGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab