CircNet

General Information

circRNA Basic Information

CircID	chr1:18872435\|18872546
Strand	+
CircType	exon
Host Gene	ENSG00000159423.15;
Algorism	CIRI2;
Sequence	CTGGGGAAAGGAGATGGAGCAGCTCTTGGGATCCTTTGGGGAAAAGGAGGCCATTCTGGGCCCCTTGGCAAACCTCACCACTCACAGAGGCTCCTGGCCTTGATCCCTGCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:18872435\|18872546	hsa-miR-335-5p	0	0	1
chr1:18872435\|18872546	hsa-miR-335-3p	0	0	1
chr1:18872435\|18872546	hsa-miR-558	0	0	1
chr1:18872435\|18872546	hsa-miR-665	0	0	1
chr1:18872435\|18872546	hsa-miR-1294	0	1	1
chr1:18872435\|18872546	hsa-miR-1207-5p	1	1	1
chr1:18872435\|18872546	hsa-miR-638	1	0	0
chr1:18872435\|18872546	hsa-miR-4748	0	1	0
chr1:18872435\|18872546	hsa-miR-9986	0	1	0
chr1:18872435\|18872546	hsa-miR-6762-3p	1	0	0
chr1:18872435\|18872546	hsa-miR-6721-5p	0	1	0
chr1:18872435\|18872546	hsa-miR-7855-5p	0	1	0
chr1:18872435\|18872546	hsa-miR-6882-3p	1	0	0
chr1:18872435\|18872546	hsa-miR-4640-5p	1	0	0
chr1:18872435\|18872546	hsa-miR-6878-3p	0	1	0
chr1:18872435\|18872546	hsa-miR-3922-5p	0	1	0
chr1:18872435\|18872546	hsa-miR-4661-3p	0	1	0
chr1:18872435\|18872546	hsa-miR-4740-3p	1	1	0
chr1:18872435\|18872546	hsa-miR-4763-3p	0	1	0
chr1:18872435\|18872546	hsa-miR-6722-3p	1	0	0
chr1:18872435\|18872546	hsa-miR-4649-5p	1	0	0
chr1:18872435\|18872546	hsa-miR-4726-5p	1	0	0
chr1:18872435\|18872546	hsa-miR-4749-5p	1	1	0
chr1:18872435\|18872546	hsa-miR-4758-5p	1	0	0
chr1:18872435\|18872546	hsa-miR-6791-3p	0	1	0
chr1:18872435\|18872546	hsa-miR-6877-3p	1	0	0
chr1:18872435\|18872546	hsa-miR-6843-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:18872435\|18872546
ORF Type	ORF1
Protein Length	37
Nucleotide Length	111
Protein Sequence	LGKGDGAALGILWGKGGHSGPLGKPHHSQRLLALIPA
Nucleotide Sequence	CTGGGGAAAGGAGATGGAGCAGCTCTTGGGATCCTTTGGGGAAAAGGAGGCCATTCTGGGCCCCTTGGCAAACCTCACCACTCACAGAGGCTCCTGGCCTTGATCCCTGCC

CircID	chr1:18872435\|18872546
ORF Type	ORF2
Protein Length	29
Nucleotide Length	90
Protein Sequence	MEQLLGSFGEKEAILGPLANLTTHRGSWP
Nucleotide Sequence	ATGGAGCAGCTCTTGGGATCCTTTGGGGAAAAGGAGGCCATTCTGGGCCCCTTGGCAAACCTCACCACTCACAGAGGCTCCTGGCCTTGA

CircID	chr1:18872435\|18872546
ORF Type	ORF3
Protein Length	25
Nucleotide Length	75
Protein Sequence	MGKRRPFWAPWQTSPLTEAPGLDPC
Nucleotide Sequence	TTGGGGAAAAGGAGGCCATTCTGGGCCCCTTGGCAAACCTCACCACTCACAGAGGCTCCTGGCCTTGATCCCTGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information