CircNet

General Information

circRNA Basic Information

CircID	chr1:19183811\|19201815
Strand	-
CircType	exon
Host Gene	ENSG00000127481.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	TGAATCAGAAATCCTGCACCATGAGAAGCAGTACGAGCCATTCTACTCATCTTTTGTTGCACTTTCCACACACTATATTACAACAGTTTGCAGTCTCAGTTCATCAGATGAAGAGTTTGCTGCAGCTCTCTATCACTTCAACCACTCACTGGTAACCTCTGACCTTCAGTCACCTAACCTGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:19183811\|19201815
ORF Type	ORF1
Protein Length	45
Nucleotide Length	135
Protein Sequence	MRSSTSHSTHLLLHFPHTILQQFAVSVHQMKSLLQLSITSTTHW*
Nucleotide Sequence	ATGAGAAGCAGTACGAGCCATTCTACTCATCTTTTGTTGCACTTTCCACACACTATATTACAACAGTTTGCAGTCTCAGTTCATCAGATGAAGAGTTTGCTGCAGCTCTCTATCACTTCAACCACTCACTGGTAA

CircID	chr1:19183811\|19201815
ORF Type	ORF2
Protein Length	61
Nucleotide Length	183
Protein Sequence	ESEILHHEKQYEPFYSSFVALSTHYITTVCSLSSSDEEFAAALYHFNHSLVTSDLQSPNLQ
Nucleotide Sequence	GAATCAGAAATCCTGCACCATGAGAAGCAGTACGAGCCATTCTACTCATCTTTTGTTGCACTTTCCACACACTATATTACAACAGTTTGCAGTCTCAGTTCATCAGATGAAGAGTTTGCTGCAGCTCTCTATCACTTCAACCACTCACTGGTAACCTCTGACCTTCAGTCACCTAACCTGCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:19183811\|19201815	NOP56	1	2	0
chr1:19183811\|19201815	FUS	2	0	1
chr1:19183811\|19201815	FAM120A	0	1	0
chr1:19183811\|19201815	KHDRBS1	0	4	0
chr1:19183811\|19201815	FKBP4	0	1	0
chr1:19183811\|19201815	PRPF8	0	3	0
chr1:19183811\|19201815	UPF1	1	2	0
chr1:19183811\|19201815	TAF15	0	0	2
chr1:19183811\|19201815	FMR1	0	1	3
chr1:19183811\|19201815	TROVE2	1	0	0
chr1:19183811\|19201815	ELAVL1	1	0	0
chr1:19183811\|19201815	DGCR8	0	2	0
chr1:19183811\|19201815	NOP58	1	1	3
chr1:19183811\|19201815	TNRC6A	0	1	0
chr1:19183811\|19201815	U2AF2	4	6	0
chr1:19183811\|19201815	DDX54	2	0	8
chr1:19183811\|19201815	RBM10	3	2	0
chr1:19183811\|19201815	HNRNPL	0	1	0
chr1:19183811\|19201815	HNRNPM	5	0	0
chr1:19183811\|19201815	PTBP1	0	0	2
chr1:19183811\|19201815	HNRNPC	8	0	0
chr1:19183811\|19201815	DHX9	0	0	1
chr1:19183811\|19201815	DDX3X	2	0	2
chr1:19183811\|19201815	LARP7	1	0	1
chr1:19183811\|19201815	KHSRP	0	3	0
chr1:19183811\|19201815	HNRNPA1	1	1	0
chr1:19183811\|19201815	FXR1	0	1	2
chr1:19183811\|19201815	FXR2	0	0	1
chr1:19183811\|19201815	SND1	0	0	1
chr1:19183811\|19201815	IGF2BP1	0	3	5
chr1:19183811\|19201815	BUD13	0	1	0
chr1:19183811\|19201815	IGF2BP3	0	0	5
chr1:19183811\|19201815	IGF2BP2	0	3	8
chr1:19183811\|19201815	TARDBP	0	1	0
chr1:19183811\|19201815	GTF2F1	0	0	1
chr1:19183811\|19201815	RBFOX2	1	0	1
chr1:19183811\|19201815	RBM47	0	0	1
chr1:19183811\|19201815	CSTF2T	1	0	2
chr1:19183811\|19201815	HNRNPK	0	1	0
chr1:19183811\|19201815	FBL	0	1	2
chr1:19183811\|19201815	AGO1	0	0	1
chr1:19183811\|19201815	EIF4A3	4	4	3
chr1:19183811\|19201815	AGO2	1	0	12

CircRNA Information