CircRNA Information

General Information
circRNA Basic Information
CircID chr1:19339328|19339417
Strand +
CircType exon
Host Gene ENSG00000077549.16;
Algorism CIRI2;
Sequence AGCTGCATCATTGACCGCACAGCGCCATCTCTCCCTGAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:19339328|19339417 hsa-miR-185-5p 0 0 1
chr1:19339328|19339417 hsa-miR-185-3p 0 0 1
chr1:19339328|19339417 hsa-miR-484 0 0 1
chr1:19339328|19339417 hsa-miR-652-5p 0 0 1
chr1:19339328|19339417 hsa-miR-652-3p 0 0 1
chr1:19339328|19339417 hsa-miR-1301-5p 0 0 1
chr1:19339328|19339417 hsa-miR-1301-3p 0 0 1
chr1:19339328|19339417 hsa-miR-765 0 0 1
chr1:19339328|19339417 hsa-miR-298 1 0 1
chr1:19339328|19339417 hsa-miR-147b-5p 0 0 1
chr1:19339328|19339417 hsa-miR-147b-3p 0 0 1
chr1:19339328|19339417 hsa-miR-1266-5p 0 0 1
chr1:19339328|19339417 hsa-miR-1266-3p 0 0 1
chr1:19339328|19339417 hsa-miR-1322 0 0 1
chr1:19339328|19339417 hsa-miR-644 0 0 1
chr1:19339328|19339417 hsa-miR-638 1 0 0
chr1:19339328|19339417 hsa-miR-658 1 0 0
chr1:19339328|19339417 hsa-miR-762 1 0 0
chr1:19339328|19339417 hsa-miR-3175 1 0 0
chr1:19339328|19339417 hsa-miR-3665 1 0 0
chr1:19339328|19339417 hsa-miR-3135b 1 0 0
chr1:19339328|19339417 hsa-miR-4488 1 0 0
chr1:19339328|19339417 hsa-miR-4518 1 0 0
chr1:19339328|19339417 hsa-miR-4533 1 0 0
chr1:19339328|19339417 hsa-miR-4651 1 0 0
chr1:19339328|19339417 hsa-miR-4706 1 0 0
chr1:19339328|19339417 hsa-miR-4741 1 0 0
chr1:19339328|19339417 hsa-miR-6133 1 0 0
chr1:19339328|19339417 hsa-miR-8085 1 0 0
chr1:19339328|19339417 hsa-miR-12128 1 0 0
chr1:19339328|19339417 hsa-miR-6765-5p 1 0 0
chr1:19339328|19339417 hsa-miR-7106-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6825-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6894-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6510-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6089 1 0 0
chr1:19339328|19339417 hsa-miR-6727-5p 1 0 0
chr1:19339328|19339417 hsa-miR-432-5p 1 0 0
chr1:19339328|19339417 hsa-miR-7108-5p 1 0 0
chr1:19339328|19339417 hsa-miR-3180-3p 1 0 0
chr1:19339328|19339417 hsa-miR-6732-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6798-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6760-5p 1 0 0
chr1:19339328|19339417 hsa-miR-2467-3p 1 0 0
chr1:19339328|19339417 hsa-miR-4690-5p 1 0 0
chr1:19339328|19339417 hsa-miR-877-5p 1 0 0
chr1:19339328|19339417 hsa-miR-4743-5p 1 0 0
chr1:19339328|19339417 hsa-miR-4787-5p 1 0 0
chr1:19339328|19339417 hsa-miR-149-3p 1 0 0
chr1:19339328|19339417 hsa-miR-6717-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6781-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6877-5p 1 0 0
chr1:19339328|19339417 hsa-miR-1250-5p 1 0 0
chr1:19339328|19339417 hsa-miR-1233-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6769b-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6778-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6787-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6870-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6726-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6752-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6756-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6803-5p 1 0 0
chr1:19339328|19339417 hsa-miR-7110-5p 1 0 0
chr1:19339328|19339417 hsa-miR-11181-3p 1 0 0
chr1:19339328|19339417 hsa-miR-1249-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6779-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6797-5p 1 0 0
chr1:19339328|19339417 hsa-miR-7111-5p 1 0 0
chr1:19339328|19339417 hsa-miR-4728-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6780b-5p 1 0 0
chr1:19339328|19339417 hsa-miR-4649-5p 1 0 0
chr1:19339328|19339417 hsa-miR-4726-5p 1 0 0
chr1:19339328|19339417 hsa-miR-4745-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6729-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6777-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6858-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6883-5p 1 0 0
chr1:19339328|19339417 hsa-miR-939-5p 1 0 0
chr1:19339328|19339417 hsa-miR-1910-3p 1 0 0
chr1:19339328|19339417 hsa-miR-6511a-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6731-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6891-5p 1 0 0
chr1:19339328|19339417 hsa-miR-6785-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:19339328|19339417
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MTAQRHLSLRIKPIATLLRLRACFCH
Nucleotide Sequence TTGACCGCACAGCGCCATCTCTCCCTGAGAATAAAGCCGATAGCCACCCTCCTCCGGCTCCGAGCCTGCTTCTGCCAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab