CircNet

General Information

circRNA Basic Information

CircID	chr1:197583152\|197645743
Strand	-
CircType	exon
Host Gene	ENSG00000213047.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	CATTCCTACTTCATTGCCCCTGATGTAACTGGACTCCCAACAATACCCGAGAGTAGAAATCTTACAGAATATTTTGTTGCCGTGGATGTGAACAACATGCTGCAGCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGTGATTATCTCGAGCAAATTAAGCACTTTAACTGCCTGTATCCATGGATCAGCTGCTCTTCTATACCCAATGTATTGGCAACACATATACATCCCAGTGCTTCCTCCACACCTGCTGGACTACTGCTGTGCCCCAATGCCATACCTGATTGGAATACACTCCAGCCTCATAGAGAGAGTGAAAAACAAATCATTGGAAGATGTTGTTATGTTAAATGTTGATACAAACACATTAGAATCACCATTTAGTGACTTGAACAACCTACCAAGTGATGTGGTCTCGGCCTTGAAAAATAAACTGAAGAAGCAGTCTACAGCTACGGGTGATGGAGTAGCTAGGGCCTTTCTTAGAGCACAGGCTGCTTTGTTTGGATCCTACAGAGATGCACTGAGATACAAACCTGGTGAGCCCATCACTTTCTGTGAGGAGAGTTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGTTCCTGGAAACTGCCATTAACCTCCAGCTTTTTAAGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:197583152\|197645743	hsa-miR-138-1-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:197583152\|197645743
ORF Type	ORF1
Protein Length	182
Nucleotide Length	546
Protein Sequence	MLQLYASMLHERRIVIISSKLSTLTACIHGSAALLYPMYWQHIYIPVLPPHLLDYCCAPMPYLIGIHSSLIERVKNKSLEDVVMLNVDTNTLESPFSDLNNLPSDVVSALKNKLKKQSTATGDGVARAFLRAQAALFGSYRDALRYKPGEPITFCEESFVKHRSSVMKQFLETAINLQLFKQ
Nucleotide Sequence	ATGCTGCAGCTGTATGCCAGTATGCTGCATGAAAGGCGCATCGTGATTATCTCGAGCAAATTAAGCACTTTAACTGCCTGTATCCATGGATCAGCTGCTCTTCTATACCCAATGTATTGGCAACACATATACATCCCAGTGCTTCCTCCACACCTGCTGGACTACTGCTGTGCCCCAATGCCATACCTGATTGGAATACACTCCAGCCTCATAGAGAGAGTGAAAAACAAATCATTGGAAGATGTTGTTATGTTAAATGTTGATACAAACACATTAGAATCACCATTTAGTGACTTGAACAACCTACCAAGTGATGTGGTCTCGGCCTTGAAAAATAAACTGAAGAAGCAGTCTACAGCTACGGGTGATGGAGTAGCTAGGGCCTTTCTTAGAGCACAGGCTGCTTTGTTTGGATCCTACAGAGATGCACTGAGATACAAACCTGGTGAGCCCATCACTTTCTGTGAGGAGAGTTTTGTAAAGCACCGCTCAAGCGTGATGAAACAGTTCCTGGAAACTGCCATTAACCTCCAGCTTTTTAAGCAG

CircID	chr1:197583152\|197645743
ORF Type	ORF2
Protein Length	75
Nucleotide Length	225
Protein Sequence	MYMCCQYIGYRRAADPWIQAVKVLNLLEIITMRLSCSILAYSCSMLFTSTATKYSVRFLLSGIVGSPVTSGAMK*
Nucleotide Sequence	ATGTATATGTGTTGCCAATACATTGGGTATAGAAGAGCAGCTGATCCATGGATACAGGCAGTTAAAGTGCTTAATTTGCTCGAGATAATCACGATGCGCCTTTCATGCAGCATACTGGCATACAGCTGCAGCATGTTGTTCACATCCACGGCAACAAAATATTCTGTAAGATTTCTACTCTCGGGTATTGTTGGGAGTCCAGTTACATCAGGGGCAATGAAGTAG

CircID	chr1:197583152\|197645743
ORF Type	ORF3
Protein Length	46
Nucleotide Length	138
Protein Sequence	MALGHSSSPAGVEEALGCICVANTLGIEEQLIHGYRQLKCLICSR*
Nucleotide Sequence	ATGGCATTGGGGCACAGCAGTAGTCCAGCAGGTGTGGAGGAAGCACTGGGATGTATATGTGTTGCCAATACATTGGGTATAGAAGAGCAGCTGATCCATGGATACAGGCAGTTAAAGTGCTTAATTTGCTCGAGATAA

CircID	chr1:197583152\|197645743
ORF Type	ORF4
Protein Length	42
Nucleotide Length	126
Protein Sequence	MQHTGIQLQHVVHIHGNKIFCKISTLGYCWESSYIRGNEVGM
Nucleotide Sequence	ATGCAGCATACTGGCATACAGCTGCAGCATGTTGTTCACATCCACGGCAACAAAATATTCTGTAAGATTTCTACTCTCGGGTATTGTTGGGAGTCCAGTTACATCAGGGGCAATGAAGTAGGAATG

CircID	chr1:197583152\|197645743
ORF Type	ORF5
Protein Length	36
Nucleotide Length	108
Protein Sequence	MAVSRNCFITLERCFTKLSSQKVMGSPGLYLSASL*
Nucleotide Sequence	ATGGCAGTTTCCAGGAACTGTTTCATCACGCTTGAGCGGTGCTTTACAAAACTCTCCTCACAGAAAGTGATGGGCTCACCAGGTTTGTATCTCAGTGCATCTCTGTAG

CircID	chr1:197583152\|197645743
ORF Type	ORF6
Protein Length	35
Nucleotide Length	105
Protein Sequence	MDQLLFYTQCIGNTYTSQCFLHTCWTTAVPQCHT*
Nucleotide Sequence	ATGGATCAGCTGCTCTTCTATACCCAATGTATTGGCAACACATATACATCCCAGTGCTTCCTCCACACCTGCTGGACTACTGCTGTGCCCCAATGCCATACCTGA

CircID	chr1:197583152\|197645743
ORF Type	ORF7
Protein Length	61
Nucleotide Length	183
Protein Sequence	VLYKTLLTESDGLTRFVSQCISVGSKQSSLCSKKGPSYSITRSCRLLLQFIFQGRDHITW*
Nucleotide Sequence	GTGCTTTACAAAACTCTCCTCACAGAAAGTGATGGGCTCACCAGGTTTGTATCTCAGTGCATCTCTGTAGGATCCAAACAAAGCAGCCTGTGCTCTAAGAAAGGCCCTAGCTACTCCATCACCCGTAGCTGTAGACTGCTTCTTCAGTTTATTTTTCAAGGCCGAGACCACATCACTTGGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:197583152\|197645743	FMR1	0	0	1
chr1:197583152\|197645743	NOP56	0	2	0
chr1:197583152\|197645743	MOV10	0	0	1
chr1:197583152\|197645743	ELAVL1	2	2	2
chr1:197583152\|197645743	CELF2	0	0	1
chr1:197583152\|197645743	PRPF8	0	1	4
chr1:197583152\|197645743	CPSF7	0	1	1
chr1:197583152\|197645743	CPSF6	0	0	2
chr1:197583152\|197645743	FUS	2	3	1
chr1:197583152\|197645743	SRSF1	0	0	3
chr1:197583152\|197645743	NOP58	0	1	1
chr1:197583152\|197645743	U2AF1	0	0	1
chr1:197583152\|197645743	U2AF2	20	6	4
chr1:197583152\|197645743	SRSF9	0	0	1
chr1:197583152\|197645743	DDX54	0	0	14
chr1:197583152\|197645743	PTBP1	1	1	0
chr1:197583152\|197645743	HNRNPC	7	5	0
chr1:197583152\|197645743	SMNDC1	1	0	1
chr1:197583152\|197645743	HNRNPA1	1	3	0
chr1:197583152\|197645743	LIN28B	0	2	3
chr1:197583152\|197645743	IGF2BP1	0	0	2
chr1:197583152\|197645743	IGF2BP2	0	0	1
chr1:197583152\|197645743	MBNL2	0	1	0
chr1:197583152\|197645743	BUD13	0	1	0
chr1:197583152\|197645743	DDX42	0	0	1
chr1:197583152\|197645743	CSTF2T	0	4	1
chr1:197583152\|197645743	CSTF2	0	9	0
chr1:197583152\|197645743	RBM22	0	2	0
chr1:197583152\|197645743	WDR33	0	1	1
chr1:197583152\|197645743	EIF4A3	0	0	6
chr1:197583152\|197645743	AGO2	0	0	1

CircRNA Information