CircNet

General Information

circRNA Basic Information

CircID	chr1:200408928\|200409090
Strand	+
CircType	exon
Host Gene	ENSG00000162702.7;
Algorism	CIRI2;
Sequence	CACCATGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAAAAAGGCAAAAAGGCCAAAGCCAGAATCTCAGGGAATCAAAGCCAAGAGGAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTTGGAGATGGAGAAGGTGCCATCCTCTCCCCAAGTCAGAAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:200408928\|200409090	hsa-miR-148a-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-148a-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-183-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-183-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-152-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-152-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-136-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-136-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-149-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-149-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-370-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-370-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-148b-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-148b-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-345-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-345-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-489-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-489-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-939-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-939-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-129-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-125a-5p	0	1	1
chr1:200408928\|200409090	hsa-miR-515-5p	0	0	1
chr1:200408928\|200409090	hsa-miR-516a-3p	0	0	1
chr1:200408928\|200409090	hsa-miR-1274a	0	0	1
chr1:200408928\|200409090	hsa-miR-125b	0	0	1
chr1:200408928\|200409090	hsa-miR-7	0	0	1
chr1:200408928\|200409090	hsa-miR-514	0	0	1
chr1:200408928\|200409090	hsa-miR-544b	0	1	0
chr1:200408928\|200409090	hsa-miR-3165	1	0	0
chr1:200408928\|200409090	hsa-miR-3175	0	1	0
chr1:200408928\|200409090	hsa-miR-4324	0	1	0
chr1:200408928\|200409090	hsa-miR-4268	0	1	0
chr1:200408928\|200409090	hsa-miR-4464	0	1	0
chr1:200408928\|200409090	hsa-miR-4748	0	1	0
chr1:200408928\|200409090	hsa-miR-12126	0	1	0
chr1:200408928\|200409090	hsa-miR-3614-5p	1	1	0
chr1:200408928\|200409090	hsa-miR-5589-3p	1	0	0
chr1:200408928\|200409090	hsa-miR-670-5p	0	1	0
chr1:200408928\|200409090	hsa-miR-6763-5p	0	1	0
chr1:200408928\|200409090	hsa-miR-6731-5p	0	1	0
chr1:200408928\|200409090	hsa-miR-125b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:200408928\|200409090
ORF Type	ORF1
Protein Length	53
Nucleotide Length	159
Protein Sequence	MALRSQSRTLMSKRQKGQSQNLRESKPRGSQVHLPNLLWLEMEKVPSSPQVRN
Nucleotide Sequence	ATGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAAAAAGGCAAAAAGGCCAAAGCCAGAATCTCAGGGAATCAAAGCCAAGAGGAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTTGGAGATGGAGAAGGTGCCATCCTCTCCCCAAGTCAGAAAC

CircID	chr1:200408928\|200409090
ORF Type	ORF2
Protein Length	25
Nucleotide Length	78
Protein Sequence	MGRGWHLLHLQPKKVWKMHLASSWL
Nucleotide Sequence	TTGGGGAGAGGATGGCACCTTCTCCATCTCCAACCAAAGAAGGTTTGGAAGATGCACTTGGCTTCCTCTTGGCTTTGA

CircID	chr1:200408928\|200409090
ORF Type	ORF3
Protein Length	53
Nucleotide Length	159
Protein Sequence	MTWGEDGTFSISNQRRFGRCTWLPLGFDSLRFWLWPFCLFDISVLLWLLSAMV
Nucleotide Sequence	CTGACTTGGGGAGAGGATGGCACCTTCTCCATCTCCAACCAAAGAAGGTTTGGAAGATGCACTTGGCTTCCTCTTGGCTTTGATTCCCTGAGATTCTGGCTTTGGCCTTTTTGCCTTTTTGACATTAGTGTCCTGCTTTGGCTCCTCAGTGCCATGGTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information