CircNet

General Information

circRNA Basic Information

CircID	chr1:200807376\|200832845
Strand	+
CircType	exon
Host Gene	ENSG00000118200.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGTGCACATTTGGCCATGATCGATACCCTCATGATGGCTTATACTGTAGAAATGGTCAGTATAGAAAAAGTAATTGCGTGTGCTCAGCAGTATTCAGCTTTTTTTCAAGCCACAGATCTGCCCTATGATATTGAGGACGCTGTCATGTACTGGATAAATAAGGTAAATGAACATTTGAAAGACATAATGGAACAAGAACAAAAACTGAAAGAACATCACACAGTTGAAGCTCCAGGAGGTCAAAAGTCTCCTTCCAAATGGTTTTGGAAACTGGTTCCAGCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCATTGGTAGAAAATTTGTTGAAGGATGGGACAGATGGCTGTGCATTAGCTGCCCTTATTCATTTTTACTGTCCTGATGTTGTCAGATTAGAGGATATTTGTTTGAAAGAAACTATGTCTTTGGCTGATAGCCTGTATAATCTGCAGCTGATTCAAGAATTTTGCCAAGAATACTTGAACCAGTGTTGCCATTTCACTCTGGAAGATATGCTCTATGCTGCTTCATCCATAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:200807376\|200832845	hsa-miR-141-5p	1	1	1
chr1:200807376\|200832845	hsa-miR-93-3p	1	1	1
chr1:200807376\|200832845	hsa-miR-139-3p	1	1	1
chr1:200807376\|200832845	hsa-miR-4677-5p	1	1	1
chr1:200807376\|200832845	hsa-miR-152-3p	1	1	1
chr1:200807376\|200832845	hsa-miR-770-5p	1	1	1
chr1:200807376\|200832845	hsa-miR-27b-5p	1	1	1
chr1:200807376\|200832845	hsa-miR-1226-5p	1	1	1
chr1:200807376\|200832845	hsa-miR-4708-3p	1	1	1
chr1:200807376\|200832845	hsa-miR-873-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:200807376\|200832845
ORF Type	ORF1
Protein Length	182
Nucleotide Length	546
Protein Sequence	MIDTLMMAYTVEMVSIEKVIACAQQYSAFFQATDLPYDIEDAVMYWINKVNEHLKDIMEQEQKLKEHHTVEAPGGQKSPSKWFWKLVPARYRKEQTLLKQLPCIPLVENLLKDGTDGCALAALIHFYCPDVVRLEDICLKETMSLADSLYNLQLIQEFCQEYLNQCCHFTLEDMLYAASSIK
Nucleotide Sequence	ATGATCGATACCCTCATGATGGCTTATACTGTAGAAATGGTCAGTATAGAAAAAGTAATTGCGTGTGCTCAGCAGTATTCAGCTTTTTTTCAAGCCACAGATCTGCCCTATGATATTGAGGACGCTGTCATGTACTGGATAAATAAGGTAAATGAACATTTGAAAGACATAATGGAACAAGAACAAAAACTGAAAGAACATCACACAGTTGAAGCTCCAGGAGGTCAAAAGTCTCCTTCCAAATGGTTTTGGAAACTGGTTCCAGCTCGTTATCGGAAAGAGCAAACATTGCTTAAGCAACTGCCTTGCATTCCATTGGTAGAAAATTTGTTGAAGGATGGGACAGATGGCTGTGCATTAGCTGCCCTTATTCATTTTTACTGTCCTGATGTTGTCAGATTAGAGGATATTTGTTTGAAAGAAACTATGTCTTTGGCTGATAGCCTGTATAATCTGCAGCTGATTCAAGAATTTTGCCAAGAATACTTGAACCAGTGTTGCCATTTCACTCTGGAAGATATGCTCTATGCTGCTTCATCCATAAAG

CircID	chr1:200807376\|200832845
ORF Type	ORF2
Protein Length	54
Nucleotide Length	162
Protein Sequence	MFALSDNELEPVSKTIWKETFDLLELQLCDVLSVFVLVPLCLSNVHLPYLSST*
Nucleotide Sequence	ATGTTTGCTCTTTCCGATAACGAGCTGGAACCAGTTTCCAAAACCATTTGGAAGGAGACTTTTGACCTCCTGGAGCTTCAACTGTGTGATGTTCTTTCAGTTTTTGTTCTTGTTCCATTATGTCTTTCAAATGTTCATTTACCTTATTTATCCAGTACATGA

CircID	chr1:200807376\|200832845
ORF Type	ORF3
Protein Length	41
Nucleotide Length	123
Protein Sequence	MFFQFLFLFHYVFQMFIYLIYPVHDSVLNIIGQICGLKKS*
Nucleotide Sequence	ATGTTCTTTCAGTTTTTGTTCTTGTTCCATTATGTCTTTCAAATGTTCATTTACCTTATTTATCCAGTACATGACAGCGTCCTCAATATCATAGGGCAGATCTGTGGCTTGAAAAAAAGCTGA

CircID	chr1:200807376\|200832845
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MATLVQVFLAKFLNQLQIIQAISQRHSFFQTNIL*
Nucleotide Sequence	ATGGCAACACTGGTTCAAGTATTCTTGGCAAAATTCTTGAATCAGCTGCAGATTATACAGGCTATCAGCCAAAGACATAGTTTCTTTCAAACAAATATCCTCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:200807376\|200832845	NOP56	2	0	0
chr1:200807376\|200832845	ELAVL1	6	5	3
chr1:200807376\|200832845	CPSF7	0	1	0
chr1:200807376\|200832845	SRSF10	1	0	0
chr1:200807376\|200832845	TAF15	2	0	0
chr1:200807376\|200832845	FMR1	0	0	3
chr1:200807376\|200832845	FUS	1	0	0
chr1:200807376\|200832845	SRSF1	0	0	1
chr1:200807376\|200832845	NOP58	2	0	3
chr1:200807376\|200832845	U2AF2	7	6	2
chr1:200807376\|200832845	DDX54	0	1	9
chr1:200807376\|200832845	FIP1L1	0	2	0
chr1:200807376\|200832845	PTBP1	2	1	0
chr1:200807376\|200832845	HNRNPC	22	12	4
chr1:200807376\|200832845	HNRNPA1	7	5	0
chr1:200807376\|200832845	IGF2BP3	0	0	2
chr1:200807376\|200832845	IGF2BP2	0	2	9
chr1:200807376\|200832845	RBM47	0	1	3
chr1:200807376\|200832845	CSTF2T	0	1	2
chr1:200807376\|200832845	CSTF2	0	2	0
chr1:200807376\|200832845	WDR33	0	1	0
chr1:200807376\|200832845	AGO2	0	0	5
chr1:200807376\|200832845	EWSR1	0	1	0
chr1:200807376\|200832845	EIF4A3	1	0	9
chr1:200807376\|200832845	FBL	1	0	3

CircRNA Information