CircNet

General Information

circRNA Basic Information

CircID	chr1:201817088\|201817285
Strand	+
CircType	exon
Host Gene	ENSG00000134369.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTCCATGGACAGAAAGCTGCTTGGGAGGACCCAGTGGAATGGGTCCGGGACACACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAAGCTGTACCACCTGCCCCCACCCACCGTGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAGTTCTCTGGACTCAGATCCTCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:201817088\|201817285	hsa-miR-206	0	0	1
chr1:201817088\|201817285	hsa-miR-320a-5p	0	0	1
chr1:201817088\|201817285	hsa-miR-320a-3p	0	0	1
chr1:201817088\|201817285	hsa-miR-326	0	0	1
chr1:201817088\|201817285	hsa-miR-422a	0	1	1
chr1:201817088\|201817285	hsa-miR-603	0	0	1
chr1:201817088\|201817285	hsa-miR-613	0	0	1
chr1:201817088\|201817285	hsa-miR-1197	0	0	1
chr1:201817088\|201817285	hsa-miR-296-5p	1	0	1
chr1:201817088\|201817285	hsa-miR-330-3p	0	0	1
chr1:201817088\|201817285	hsa-miR-324-3p	0	0	1
chr1:201817088\|201817285	hsa-miR-320b	0	1	1
chr1:201817088\|201817285	hsa-miR-320c	0	1	1
chr1:201817088\|201817285	hsa-miR-330-5p	0	0	1
chr1:201817088\|201817285	hsa-miR-320d	0	1	1
chr1:201817088\|201817285	hsa-miR-1274a	0	0	1
chr1:201817088\|201817285	hsa-miR-1280	0	0	1
chr1:201817088\|201817285	hsa-miR-378	0	0	1
chr1:201817088\|201817285	hsa-miR-1	0	0	1
chr1:201817088\|201817285	hsa-miR-1185	0	0	1
chr1:201817088\|201817285	hsa-miR-346	1	0	0
chr1:201817088\|201817285	hsa-miR-1913	1	1	0
chr1:201817088\|201817285	hsa-miR-711	0	1	0
chr1:201817088\|201817285	hsa-miR-3131	0	1	0
chr1:201817088\|201817285	hsa-miR-378b	0	1	0
chr1:201817088\|201817285	hsa-miR-378c	0	1	0
chr1:201817088\|201817285	hsa-miR-378e	0	1	0
chr1:201817088\|201817285	hsa-miR-378f	0	1	0
chr1:201817088\|201817285	hsa-miR-4739	1	0	0
chr1:201817088\|201817285	hsa-miR-5191	0	1	0
chr1:201817088\|201817285	hsa-miR-5685	0	1	0
chr1:201817088\|201817285	hsa-miR-134-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-4700-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-6836-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-7154-3p	0	1	0
chr1:201817088\|201817285	hsa-miR-6845-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-3605-5p	0	1	0
chr1:201817088\|201817285	hsa-miR-4763-5p	1	0	0
chr1:201817088\|201817285	hsa-miR-2277-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-6803-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-3191-5p	0	1	0
chr1:201817088\|201817285	hsa-miR-3677-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-3065-3p	0	1	0
chr1:201817088\|201817285	hsa-miR-4695-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-6804-3p	1	1	0
chr1:201817088\|201817285	hsa-miR-106b-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-6741-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-6752-3p	0	1	0
chr1:201817088\|201817285	hsa-miR-4529-5p	0	1	0
chr1:201817088\|201817285	hsa-miR-328-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-6851-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-4520-3p	0	1	0
chr1:201817088\|201817285	hsa-miR-6779-5p	0	1	0
chr1:201817088\|201817285	hsa-miR-6780a-5p	0	1	0
chr1:201817088\|201817285	hsa-miR-6799-3p	1	0	0
chr1:201817088\|201817285	hsa-miR-3679-5p	0	1	0
chr1:201817088\|201817285	hsa-miR-378a-3p	0	1	0
chr1:201817088\|201817285	hsa-miR-6724-5p	1	0	0
chr1:201817088\|201817285	hsa-miR-4690-3p	0	1	0
chr1:201817088\|201817285	hsa-miR-4482-5p	0	1	0
chr1:201817088\|201817285	hsa-miR-378d	0	1	0
chr1:201817088\|201817285	hsa-miR-7157-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:201817088\|201817285
ORF Type	ORF1
Protein Length	64
Nucleotide Length	192
Protein Sequence	MDRKLLGRTQWNGSGTHFPGHQPNKTNQSCTTCPHPPWALTALPHLPRIGQSKTAPQVLWTQIL
Nucleotide Sequence	ATGGACAGAAAGCTGCTTGGGAGGACCCAGTGGAATGGGTCCGGGACACACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAAGCTGTACCACCTGCCCCCACCCACCGTGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAGTTCTCTGGACTCAGATCCTC

CircID	chr1:201817088\|201817285
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MGPGHTSLAISPTRPIKAVPPAPTHRGPSQHCLTSRG*
Nucleotide Sequence	ATGGGTCCGGGACACACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAAGCTGTACCACCTGCCCCCACCCACCGTGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAG

CircID	chr1:201817088\|201817285
ORF Type	ORF3
Protein Length	55
Nucleotide Length	165
Protein Sequence	VEWVRDTLPWPSAQQDQSKLYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPL
Nucleotide Sequence	GTGGAATGGGTCCGGGACACACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAAGCTGTACCACCTGCCCCCACCCACCGTGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAGTTCTCTGGACTCAGATCCTCTG

CircID	chr1:201817088\|201817285
ORF Type	ORF1
Protein Length	52
Nucleotide Length	156
Protein Sequence	MSYPREVRQCCEGPRWVGAGGTALIGLVGLMAREVCPGPIPLGPPKQLSVHG
Nucleotide Sequence	CTGTCCTATCCTCGGGAGGTGAGGCAATGCTGTGAGGGCCCACGGTGGGTGGGGGCAGGTGGTACAGCTTTGATTGGTCTTGTTGGGCTGATGGCCAGGGAAGTGTGTCCCGGACCCATTCCACTGGGTCCTCCCAAGCAGCTTTCTGTCCATGGA

CircID	chr1:201817088\|201817285
ORF Type	ORF2
Protein Length	36
Nucleotide Length	108
Protein Sequence	MYHLPPPTVGPHSIASPPEDRTVKDSTPSSLDSDPL
Nucleotide Sequence	CTGTACCACCTGCCCCCACCCACCGTGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAGTTCTCTGGACTCAGATCCTCTG

CircID	chr1:201817088\|201817285
ORF Type	ORF3
Protein Length	64
Nucleotide Length	192
Protein Sequence	MDRKLLGRTQWNGSGTHFPGHQPNKTNQSCTTCPHPPWALTALPHLPRIGQSKTAPQVLWTQIL
Nucleotide Sequence	ATGGACAGAAAGCTGCTTGGGAGGACCCAGTGGAATGGGTCCGGGACACACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAAGCTGTACCACCTGCCCCCACCCACCGTGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAGGACAGTCAAAGACAGCACCCCAAGTTCTCTGGACTCAGATCCTC

CircID	chr1:201817088\|201817285
ORF Type	ORF4
Protein Length	43
Nucleotide Length	132
Protein Sequence	MGGPSGMGPGHTSLAISPTRPIKAVPPAPTHRGPSQHCLTSRG
Nucleotide Sequence	TTGGGAGGACCCAGTGGAATGGGTCCGGGACACACTTCCCTGGCCATCAGCCCAACAAGACCAATCAAAGCTGTACCACCTGCCCCCACCCACCGTGGGCCCTCACAGCATTGCCTCACCTCCCGAGGATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:201817088\|201817285	NOP56	2	1	0
chr1:201817088\|201817285	MOV10	1	0	1
chr1:201817088\|201817285	ELAVL1	2	2	1
chr1:201817088\|201817285	PRPF8	0	1	0
chr1:201817088\|201817285	UPF1	1	1	0
chr1:201817088\|201817285	FMR1	0	1	1
chr1:201817088\|201817285	NUDT21	0	1	0
chr1:201817088\|201817285	CPSF3	0	0	1
chr1:201817088\|201817285	DGCR8	1	0	0
chr1:201817088\|201817285	SRSF1	0	0	1
chr1:201817088\|201817285	NOP58	1	1	0
chr1:201817088\|201817285	ADAR	0	1	0
chr1:201817088\|201817285	U2AF2	5	1	1
chr1:201817088\|201817285	PTBP1	0	5	1
chr1:201817088\|201817285	HNRNPC	3	0	0
chr1:201817088\|201817285	DHX9	0	1	0
chr1:201817088\|201817285	HNRNPA1	1	1	0
chr1:201817088\|201817285	IGF2BP2	2	1	2
chr1:201817088\|201817285	TARDBP	0	1	0
chr1:201817088\|201817285	TIAL1	1	0	0
chr1:201817088\|201817285	AGO2	0	0	1
chr1:201817088\|201817285	EIF4A3	1	2	3
chr1:201817088\|201817285	FBL	1	0	0

CircRNA Information