CircNet

General Information

circRNA Basic Information

CircID	chr1:20200545\|20200648
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CTCTCTGCCTCCCTGCACTGGGCTGGGAGCTCCTGGAGGGCAGTGCGCACATCTTTCTTTTTGTATCCCCAGTGCTTTGCATAAAGCAGGTGCTCAGCAAGTGT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:20200545\|20200648	hsa-miR-148a-5p	0	0	1
chr1:20200545\|20200648	hsa-miR-148a-3p	0	0	1
chr1:20200545\|20200648	hsa-miR-152-5p	0	0	1
chr1:20200545\|20200648	hsa-miR-152-3p	0	0	1
chr1:20200545\|20200648	hsa-miR-148b-5p	0	0	1
chr1:20200545\|20200648	hsa-miR-148b-3p	0	0	1
chr1:20200545\|20200648	hsa-miR-527	0	0	1
chr1:20200545\|20200648	hsa-miR-650	0	0	1
chr1:20200545\|20200648	hsa-miR-708-5p	0	0	1
chr1:20200545\|20200648	hsa-miR-708-3p	0	0	1
chr1:20200545\|20200648	hsa-miR-665	0	0	1
chr1:20200545\|20200648	hsa-miR-933	0	0	1
chr1:20200545\|20200648	hsa-miR-1321	0	0	1
chr1:20200545\|20200648	hsa-miR-1825	0	0	1
chr1:20200545\|20200648	hsa-miR-1827	0	0	1
chr1:20200545\|20200648	hsa-miR-330-3p	0	1	1
chr1:20200545\|20200648	hsa-miR-28-5p	0	1	1
chr1:20200545\|20200648	hsa-miR-576-3p	0	0	1
chr1:20200545\|20200648	hsa-miR-628-5p	0	0	1
chr1:20200545\|20200648	hsa-miR-518a-5p	0	0	1
chr1:20200545\|20200648	hsa-miR-491-3p	0	0	1
chr1:20200545\|20200648	hsa-miR-637	1	0	0
chr1:20200545\|20200648	hsa-miR-762	1	0	0
chr1:20200545\|20200648	hsa-miR-4450	1	0	0
chr1:20200545\|20200648	hsa-miR-6075	1	0	0
chr1:20200545\|20200648	hsa-miR-7977	0	1	0
chr1:20200545\|20200648	hsa-miR-8089	1	0	0
chr1:20200545\|20200648	hsa-miR-18a-3p	0	1	0
chr1:20200545\|20200648	hsa-miR-4731-5p	1	0	0
chr1:20200545\|20200648	hsa-miR-3150a-3p	1	0	0
chr1:20200545\|20200648	hsa-miR-6500-3p	1	0	0
chr1:20200545\|20200648	hsa-miR-339-5p	1	1	0
chr1:20200545\|20200648	hsa-miR-3177-3p	1	0	0
chr1:20200545\|20200648	hsa-miR-6754-5p	0	1	0
chr1:20200545\|20200648	hsa-miR-6803-5p	1	0	0
chr1:20200545\|20200648	hsa-miR-6751-5p	1	0	0
chr1:20200545\|20200648	hsa-miR-6795-5p	1	0	0
chr1:20200545\|20200648	hsa-miR-6887-5p	1	0	0
chr1:20200545\|20200648	hsa-miR-4700-5p	1	0	0
chr1:20200545\|20200648	hsa-miR-324-3p	1	1	0
chr1:20200545\|20200648	hsa-miR-4667-5p	1	0	0
chr1:20200545\|20200648	hsa-miR-10400-3p	1	0	0
chr1:20200545\|20200648	hsa-miR-151a-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:20200545\|20200648
ORF Type	ORF1
Protein Length	33
Nucleotide Length	99
Protein Sequence	MPPCTGLGAPGGQCAHLSFCIPSALHKAGAQQV
Nucleotide Sequence	CTGCCTCCCTGCACTGGGCTGGGAGCTCCTGGAGGGCAGTGCGCACATCTTTCTTTTTGTATCCCCAGTGCTTTGCATAAAGCAGGTGCTCAGCAAGTG

CircID	chr1:20200545\|20200648
ORF Type	ORF2
Protein Length	29
Nucleotide Length	87
Protein Sequence	MGWELLEGSAHIFLFVSPVLCIKQVLSKC
Nucleotide Sequence	CTGGGCTGGGAGCTCCTGGAGGGCAGTGCGCACATCTTTCTTTTTGTATCCCCAGTGCTTTGCATAAAGCAGGTGCTCAGCAAGTGT

CircID	chr1:20200545\|20200648
ORF Type	ORF3
Protein Length	29
Nucleotide Length	87
Protein Sequence	MLYAKHWGYKKKDVRTALQELPAQCREAE
Nucleotide Sequence	CTGCTTTATGCAAAGCACTGGGGATACAAAAAGAAAGATGTGCGCACTGCCCTCCAGGAGCTCCCAGCCCAGTGCAGGGAGGCAGAG

CircID	chr1:20200545\|20200648
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MLSTCFMQSTGDTKRKMCALPSRSSQPSAGRQR
Nucleotide Sequence	TTGCTGAGCACCTGCTTTATGCAAAGCACTGGGGATACAAAAAGAAAGATGTGCGCACTGCCCTCCAGGAGCTCCCAGCCCAGTGCAGGGAGGCAGAGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information