CircRNA Information

General Information
circRNA Basic Information
CircID chr1:202012724|202013847
Strand +
CircType exon
Host Gene ENSG00000163435.14;
Algorism CIRI2;
Sequence AGGTGGGTGCCTCTGGGCGCGTGCTTGCTCTTCTTGCCCTCGAGACAGTCCCAGTACTCTTTGCTCAGCTTTCGGGGCCGGCCTCGTTTCCGCTTCCCGTGCTTGGGATCCCCCTTCTTGCAGTCACGAAAACCATCTGTGGGGACGGTGGTGGAAGGTCAAGGAGGGGCAAGAGGGGAGTTAGGGAGAGTAGCCCCTCTACAGGAAAAGGCTGCAGGAAGAGCCGGGCCCCCTGTGCATTGCTAAATGGGACGCCCTCTTGGGGACCTCCCTCGACTCACCGCTGGGGAAGAGCTTGCCATCAGTGGGATCCAGGTCCACGTCACTTCCACCGGAGTCTGAGGAGTGGGAGCTCCGAGAAGCACCAGTCCCTGCGGTGGAGACGTCAGAGCTGCCAGGGGAGGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:202012724|202013847 hsa-miR-31-5p 0 0 1
chr1:202012724|202013847 hsa-miR-31-3p 0 0 1
chr1:202012724|202013847 hsa-miR-192-5p 0 0 1
chr1:202012724|202013847 hsa-miR-192-3p 0 0 1
chr1:202012724|202013847 hsa-miR-215-5p 0 0 1
chr1:202012724|202013847 hsa-miR-215-3p 0 0 1
chr1:202012724|202013847 hsa-miR-134-5p 0 0 1
chr1:202012724|202013847 hsa-miR-134-3p 0 0 1
chr1:202012724|202013847 hsa-miR-320a-5p 0 0 1
chr1:202012724|202013847 hsa-miR-320a-3p 0 0 1
chr1:202012724|202013847 hsa-miR-492 0 0 1
chr1:202012724|202013847 hsa-miR-619-5p 0 0 1
chr1:202012724|202013847 hsa-miR-619-3p 0 0 1
chr1:202012724|202013847 hsa-miR-631 1 0 1
chr1:202012724|202013847 hsa-miR-1236-5p 0 0 1
chr1:202012724|202013847 hsa-miR-1236-3p 0 0 1
chr1:202012724|202013847 hsa-miR-1278 0 0 1
chr1:202012724|202013847 hsa-miR-1321 0 0 1
chr1:202012724|202013847 hsa-miR-486-5p 0 0 1
chr1:202012724|202013847 hsa-miR-532-3p 0 1 1
chr1:202012724|202013847 hsa-miR-885-3p 0 0 1
chr1:202012724|202013847 hsa-miR-1184 0 0 1
chr1:202012724|202013847 hsa-miR-423-5p 0 0 1
chr1:202012724|202013847 hsa-miR-1224-3p 0 0 1
chr1:202012724|202013847 hsa-miR-331-3p 0 0 1
chr1:202012724|202013847 hsa-miR-516a-5p 1 1 1
chr1:202012724|202013847 hsa-miR-320b 1 1 1
chr1:202012724|202013847 hsa-miR-320c 1 1 1
chr1:202012724|202013847 hsa-miR-483-3p 0 1 1
chr1:202012724|202013847 hsa-miR-320d 1 1 1
chr1:202012724|202013847 hsa-miR-220b 0 0 1
chr1:202012724|202013847 hsa-miR-220c 0 0 1
chr1:202012724|202013847 hsa-miR-573 0 1 0
chr1:202012724|202013847 hsa-miR-638 1 0 0
chr1:202012724|202013847 hsa-miR-661 1 0 0
chr1:202012724|202013847 hsa-miR-762 1 0 0
chr1:202012724|202013847 hsa-miR-1538 1 1 0
chr1:202012724|202013847 hsa-miR-2861 1 0 0
chr1:202012724|202013847 hsa-miR-3154 0 1 0
chr1:202012724|202013847 hsa-miR-3196 1 0 0
chr1:202012724|202013847 hsa-miR-4281 1 0 0
chr1:202012724|202013847 hsa-miR-3661 0 1 0
chr1:202012724|202013847 hsa-miR-1268b 1 0 0
chr1:202012724|202013847 hsa-miR-4429 1 1 0
chr1:202012724|202013847 hsa-miR-4449 1 0 0
chr1:202012724|202013847 hsa-miR-4488 1 0 0
chr1:202012724|202013847 hsa-miR-4498 1 0 0
chr1:202012724|202013847 hsa-miR-4508 1 0 0
chr1:202012724|202013847 hsa-miR-4515 0 1 0
chr1:202012724|202013847 hsa-miR-4519 0 1 0
chr1:202012724|202013847 hsa-miR-4523 1 0 0
chr1:202012724|202013847 hsa-miR-4535 0 1 0
chr1:202012724|202013847 hsa-miR-4660 0 1 0
chr1:202012724|202013847 hsa-miR-4721 1 0 0
chr1:202012724|202013847 hsa-miR-4739 1 0 0
chr1:202012724|202013847 hsa-miR-4741 1 0 0
chr1:202012724|202013847 hsa-miR-4754 1 0 0
chr1:202012724|202013847 hsa-miR-5093 1 1 0
chr1:202012724|202013847 hsa-miR-6090 1 0 0
chr1:202012724|202013847 hsa-miR-6860 1 0 0
chr1:202012724|202013847 hsa-miR-8052 1 1 0
chr1:202012724|202013847 hsa-miR-8073 0 1 0
chr1:202012724|202013847 hsa-miR-197-3p 0 1 0
chr1:202012724|202013847 hsa-miR-4747-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6765-5p 1 0 0
chr1:202012724|202013847 hsa-miR-6836-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6822-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6799-5p 0 1 0
chr1:202012724|202013847 hsa-miR-6804-5p 1 0 0
chr1:202012724|202013847 hsa-miR-139-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6089 1 1 0
chr1:202012724|202013847 hsa-miR-4722-5p 1 0 0
chr1:202012724|202013847 hsa-miR-6875-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6762-3p 1 1 0
chr1:202012724|202013847 hsa-miR-8069 1 0 0
chr1:202012724|202013847 hsa-miR-6873-3p 0 1 0
chr1:202012724|202013847 hsa-miR-7110-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6845-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6796-3p 0 1 0
chr1:202012724|202013847 hsa-miR-1292-5p 1 0 0
chr1:202012724|202013847 hsa-miR-185-3p 1 1 0
chr1:202012724|202013847 hsa-miR-6805-5p 0 1 0
chr1:202012724|202013847 hsa-miR-6798-5p 0 1 0
chr1:202012724|202013847 hsa-miR-4713-5p 0 1 0
chr1:202012724|202013847 hsa-miR-1226-5p 1 0 0
chr1:202012724|202013847 hsa-miR-4640-5p 1 0 0
chr1:202012724|202013847 hsa-miR-7113-3p 1 1 0
chr1:202012724|202013847 hsa-miR-3677-3p 1 0 0
chr1:202012724|202013847 hsa-miR-4732-5p 1 0 0
chr1:202012724|202013847 hsa-miR-4713-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6749-5p 1 0 0
chr1:202012724|202013847 hsa-miR-7111-3p 1 1 0
chr1:202012724|202013847 hsa-miR-4743-5p 1 0 0
chr1:202012724|202013847 hsa-miR-4667-3p 1 1 0
chr1:202012724|202013847 hsa-miR-3616-3p 1 0 0
chr1:202012724|202013847 hsa-miR-4740-5p 1 0 0
chr1:202012724|202013847 hsa-miR-5010-5p 0 1 0
chr1:202012724|202013847 hsa-miR-4776-5p 1 0 0
chr1:202012724|202013847 hsa-miR-526b-5p 1 0 0
chr1:202012724|202013847 hsa-miR-6743-3p 1 0 0
chr1:202012724|202013847 hsa-miR-525-5p 0 1 0
chr1:202012724|202013847 hsa-miR-6730-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6867-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6887-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6741-3p 1 1 0
chr1:202012724|202013847 hsa-miR-6868-5p 0 1 0
chr1:202012724|202013847 hsa-miR-6826-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6886-3p 1 0 0
chr1:202012724|202013847 hsa-miR-4749-3p 1 1 0
chr1:202012724|202013847 hsa-miR-6770-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6777-3p 1 0 0
chr1:202012724|202013847 hsa-miR-1292-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6794-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6734-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6800-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6731-3p 1 0 0
chr1:202012724|202013847 hsa-miR-3156-3p 0 1 0
chr1:202012724|202013847 hsa-miR-5089-3p 1 1 0
chr1:202012724|202013847 hsa-miR-4740-3p 1 0 0
chr1:202012724|202013847 hsa-miR-4764-3p 0 1 0
chr1:202012724|202013847 hsa-miR-4763-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6778-5p 1 0 0
chr1:202012724|202013847 hsa-miR-6803-5p 1 0 0
chr1:202012724|202013847 hsa-miR-6813-5p 0 1 0
chr1:202012724|202013847 hsa-miR-3127-3p 1 0 0
chr1:202012724|202013847 hsa-miR-4685-3p 1 1 0
chr1:202012724|202013847 hsa-miR-1237-5p 1 0 0
chr1:202012724|202013847 hsa-miR-1909-3p 0 1 0
chr1:202012724|202013847 hsa-miR-328-5p 1 0 0
chr1:202012724|202013847 hsa-miR-4649-5p 1 0 0
chr1:202012724|202013847 hsa-miR-4745-3p 1 1 0
chr1:202012724|202013847 hsa-miR-4745-5p 1 0 0
chr1:202012724|202013847 hsa-miR-6846-5p 1 0 0
chr1:202012724|202013847 hsa-miR-4436b-3p 0 1 0
chr1:202012724|202013847 hsa-miR-6885-5p 1 0 0
chr1:202012724|202013847 hsa-miR-939-5p 1 0 0
chr1:202012724|202013847 hsa-miR-3199 0 1 0
chr1:202012724|202013847 hsa-miR-365a-5p 1 0 0
chr1:202012724|202013847 hsa-miR-1914-3p 1 0 0
chr1:202012724|202013847 hsa-miR-4716-3p 0 1 0
chr1:202012724|202013847 hsa-miR-3184-5p 0 1 0
chr1:202012724|202013847 hsa-miR-6753-3p 1 0 0
chr1:202012724|202013847 hsa-miR-6762-5p 1 0 0
chr1:202012724|202013847 hsa-miR-6805-3p 1 0 0
chr1:202012724|202013847 hsa-miR-10392-3p 0 1 0
chr1:202012724|202013847 hsa-miR-4723-3p 1 1 0
chr1:202012724|202013847 hsa-miR-6769b-3p 1 0 0
chr1:202012724|202013847 hsa-miR-4756-5p 0 1 0
chr1:202012724|202013847 hsa-miR-10397-5p 0 1 0
chr1:202012724|202013847 hsa-miR-3118 0 1 0
chr1:202012724|202013847 hsa-miR-3913-5p 0 1 0
chr1:202012724|202013847 hsa-miR-301a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:202012724|202013847
ORF Type ORF1
Protein Length 77
Nucleotide Length 234
Protein Sequence MGACLLFLPSRQSQYSLLSFRGRPRFRFPCLGSPFLQSRKPSVGTVVEGQGGARGELGRVAPLQEKAAGRAGPPVHC
Nucleotide Sequence CTGGGCGCGTGCTTGCTCTTCTTGCCCTCGAGACAGTCCCAGTACTCTTTGCTCAGCTTTCGGGGCCGGCCTCGTTTCCGCTTCCCGTGCTTGGGATCCCCCTTCTTGCAGTCACGAAAACCATCTGTGGGGACGGTGGTGGAAGGTCAAGGAGGGGCAAGAGGGGAGTTAGGGAGAGTAGCCCCTCTACAGGAAAAGGCTGCAGGAAGAGCCGGGCCCCCTGTGCATTGCTAA
CircID chr1:202012724|202013847
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MGRPLGDLPRLTAGEELAISGIQVHVTSTGV
Nucleotide Sequence ATGGGACGCCCTCTTGGGGACCTCCCTCGACTCACCGCTGGGGAAGAGCTTGCCATCAGTGGGATCCAGGTCCACGTCACTTCCACCGGAGTCTGA
CircID chr1:202012724|202013847
ORF Type ORF3
Protein Length 65
Nucleotide Length 195
Protein Sequence MQEEPGPLCIAKWDALLGTSLDSPLGKSLPSVGSRSTSLPPESEEWELREAPVPAVETSELPGEG
Nucleotide Sequence CTGCAGGAAGAGCCGGGCCCCCTGTGCATTGCTAAATGGGACGCCCTCTTGGGGACCTCCCTCGACTCACCGCTGGGGAAGAGCTTGCCATCAGTGGGATCCAGGTCCACGTCACTTCCACCGGAGTCTGAGGAGTGGGAGCTCCGAGAAGCACCAGTCCCTGCGGTGGAGACGTCAGAGCTGCCAGGGGAGGGG
CircID chr1:202012724|202013847
ORF Type ORF4
Protein Length 56
Nucleotide Length 168
Protein Sequence MLNGTPSWGPPSTHRWGRACHQWDPGPRHFHRSLRSGSSEKHQSLRWRRQSCQGRG
Nucleotide Sequence TTGCTAAATGGGACGCCCTCTTGGGGACCTCCCTCGACTCACCGCTGGGGAAGAGCTTGCCATCAGTGGGATCCAGGTCCACGTCACTTCCACCGGAGTCTGAGGAGTGGGAGCTCCGAGAAGCACCAGTCCCTGCGGTGGAGACGTCAGAGCTGCCAGGGGAGGGGG
CircID chr1:202012724|202013847
ORF Type ORF5
Protein Length 51
Nucleotide Length 156
Protein Sequence MAALTSPPQGLVLLGAPTPQTPVEVTWTWIPLMASSSPAVSRGRSPRGRPI
Nucleotide Sequence CTGGCAGCTCTGACGTCTCCACCGCAGGGACTGGTGCTTCTCGGAGCTCCCACTCCTCAGACTCCGGTGGAAGTGACGTGGACCTGGATCCCACTGATGGCAAGCTCTTCCCCAGCGGTGAGTCGAGGGAGGTCCCCAAGAGGGCGTCCCATTTAG
CircID chr1:202012724|202013847
ORF Type ORF6
Protein Length 50
Nucleotide Length 153
Protein Sequence MQPFPVEGLLSLTPLLPLLDLPPPSPQMVFVTARRGIPSTGSGNEAGPES
Nucleotide Sequence CTGCAGCCTTTTCCTGTAGAGGGGCTACTCTCCCTAACTCCCCTCTTGCCCCTCCTTGACCTTCCACCACCGTCCCCACAGATGGTTTTCGTGACTGCAAGAAGGGGGATCCCAAGCACGGGAAGCGGAAACGAGGCCGGCCCCGAAAGCTGA
CircID chr1:202012724|202013847
ORF Type ORF7
Protein Length 38
Nucleotide Length 117
Protein Sequence MDPTDGKLFPSGESREVPKRASHLAMHRGPGSSCSLFL
Nucleotide Sequence CTGGATCCCACTGATGGCAAGCTCTTCCCCAGCGGTGAGTCGAGGGAGGTCCCCAAGAGGGCGTCCCATTTAGCAATGCACAGGGGGCCCGGCTCTTCCTGCAGCCTTTTCCTGTAG
CircID chr1:202012724|202013847
ORF Type ORF8
Protein Length 41
Nucleotide Length 123
Protein Sequence MQEGGSQAREAETRPAPKAEQRVLGLSRGQEEQARAQRHPP
Nucleotide Sequence CTGCAAGAAGGGGGATCCCAAGCACGGGAAGCGGAAACGAGGCCGGCCCCGAAAGCTGAGCAAAGAGTACTGGGACTGTCTCGAGGGCAAGAAGAGCAAGCACGCGCCCAGAGGCACCCACCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab