CircRNA Information

General Information
circRNA Basic Information
CircID chr1:202142816|202143024
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCGGGTACCTGTGGATCCCTGTCCCAGAGCACAGCTATAGTAACACCCTGGGGAACGAGGAGATACCTAGGCCCAGCTGCATTTCTCAGACCTAAACGCCTAGAACCCAAGCCACCTAGGCCTGCAGAGTCAGGTCAGAGTCCAGGTGTTATGTGCCTGCTCTGGGAATCCAAGAGCCTAAGTCAATGCCAAGTTTAACCAGAGGGTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:202142816|202143024 hsa-miR-326 0 0 1
chr1:202142816|202143024 hsa-miR-345-5p 0 0 1
chr1:202142816|202143024 hsa-miR-345-3p 0 0 1
chr1:202142816|202143024 hsa-miR-422a 0 0 1
chr1:202142816|202143024 hsa-miR-432-5p 0 0 1
chr1:202142816|202143024 hsa-miR-432-3p 0 0 1
chr1:202142816|202143024 hsa-miR-539-5p 0 0 1
chr1:202142816|202143024 hsa-miR-539-3p 0 0 1
chr1:202142816|202143024 hsa-miR-609 0 0 1
chr1:202142816|202143024 hsa-miR-619-5p 0 0 1
chr1:202142816|202143024 hsa-miR-619-3p 0 0 1
chr1:202142816|202143024 hsa-miR-631 0 0 1
chr1:202142816|202143024 hsa-miR-645 0 0 1
chr1:202142816|202143024 hsa-miR-1301-5p 0 0 1
chr1:202142816|202143024 hsa-miR-1301-3p 0 0 1
chr1:202142816|202143024 hsa-miR-1205 0 0 1
chr1:202142816|202143024 hsa-miR-1256 1 1 1
chr1:202142816|202143024 hsa-miR-941 0 0 1
chr1:202142816|202143024 hsa-miR-1184 0 0 1
chr1:202142816|202143024 hsa-miR-331-5p 0 0 1
chr1:202142816|202143024 hsa-miR-1207-3p 0 1 1
chr1:202142816|202143024 hsa-miR-330-5p 1 1 1
chr1:202142816|202143024 hsa-miR-1302 0 0 1
chr1:202142816|202143024 hsa-miR-378 0 0 1
chr1:202142816|202143024 hsa-miR-608 1 0 0
chr1:202142816|202143024 hsa-miR-614 1 0 0
chr1:202142816|202143024 hsa-miR-661 0 1 0
chr1:202142816|202143024 hsa-miR-1183 1 0 0
chr1:202142816|202143024 hsa-miR-2278 0 1 0
chr1:202142816|202143024 hsa-miR-3135a 1 0 0
chr1:202142816|202143024 hsa-miR-4298 0 1 0
chr1:202142816|202143024 hsa-miR-4314 0 1 0
chr1:202142816|202143024 hsa-miR-4256 0 1 0
chr1:202142816|202143024 hsa-miR-4259 1 1 0
chr1:202142816|202143024 hsa-miR-4269 0 1 0
chr1:202142816|202143024 hsa-miR-378f 0 1 0
chr1:202142816|202143024 hsa-miR-4507 1 0 0
chr1:202142816|202143024 hsa-miR-4518 0 1 0
chr1:202142816|202143024 hsa-miR-4522 0 1 0
chr1:202142816|202143024 hsa-miR-4538 1 0 0
chr1:202142816|202143024 hsa-miR-4642 1 0 0
chr1:202142816|202143024 hsa-miR-4656 1 0 0
chr1:202142816|202143024 hsa-miR-4688 1 0 0
chr1:202142816|202143024 hsa-miR-4734 1 0 0
chr1:202142816|202143024 hsa-miR-5047 0 1 0
chr1:202142816|202143024 hsa-miR-5093 1 1 0
chr1:202142816|202143024 hsa-miR-8058 0 1 0
chr1:202142816|202143024 hsa-miR-12114 1 0 0
chr1:202142816|202143024 hsa-miR-12115 1 0 0
chr1:202142816|202143024 hsa-miR-4687-3p 1 0 0
chr1:202142816|202143024 hsa-miR-7845-5p 1 0 0
chr1:202142816|202143024 hsa-miR-6772-5p 1 0 0
chr1:202142816|202143024 hsa-miR-6793-5p 1 1 0
chr1:202142816|202143024 hsa-miR-6765-3p 0 1 0
chr1:202142816|202143024 hsa-miR-6810-5p 1 0 0
chr1:202142816|202143024 hsa-miR-6735-3p 1 0 0
chr1:202142816|202143024 hsa-miR-615-5p 0 1 0
chr1:202142816|202143024 hsa-miR-939-3p 1 0 0
chr1:202142816|202143024 hsa-miR-5004-3p 0 1 0
chr1:202142816|202143024 hsa-miR-92b-5p 1 0 0
chr1:202142816|202143024 hsa-miR-6749-5p 1 0 0
chr1:202142816|202143024 hsa-miR-3690 0 1 0
chr1:202142816|202143024 hsa-miR-2276-5p 0 1 0
chr1:202142816|202143024 hsa-miR-6501-3p 0 1 0
chr1:202142816|202143024 hsa-miR-4714-5p 0 1 0
chr1:202142816|202143024 hsa-miR-4763-3p 1 0 0
chr1:202142816|202143024 hsa-miR-6743-5p 1 0 0
chr1:202142816|202143024 hsa-miR-6752-5p 1 0 0
chr1:202142816|202143024 hsa-miR-4685-5p 1 0 0
chr1:202142816|202143024 hsa-miR-6511b-5p 0 1 0
chr1:202142816|202143024 hsa-miR-4646-5p 0 1 0
chr1:202142816|202143024 hsa-miR-10394-5p 1 1 0
chr1:202142816|202143024 hsa-miR-10397-5p 1 0 0
chr1:202142816|202143024 hsa-miR-6764-5p 0 1 0
chr1:202142816|202143024 hsa-miR-6811-5p 0 1 0
chr1:202142816|202143024 hsa-miR-3922-3p 0 1 0
chr1:202142816|202143024 hsa-miR-7157-3p 0 1 0
chr1:202142816|202143024 hsa-miR-4724-3p 1 0 0
chr1:202142816|202143024 hsa-miR-301a-5p 0 1 0
chr1:202142816|202143024 hsa-miR-301b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:202142816|202143024
ORF Type ORF1
Protein Length 59
Nucleotide Length 180
Protein Sequence MSQSTAIVTPWGTRRYLGPAAFLRPKRLEPKPPRPAESGQSPGVMCLLWESKSLSQCQV
Nucleotide Sequence CTGTCCCAGAGCACAGCTATAGTAACACCCTGGGGAACGAGGAGATACCTAGGCCCAGCTGCATTTCTCAGACCTAAACGCCTAGAACCCAAGCCACCTAGGCCTGCAGAGTCAGGTCAGAGTCCAGGTGTTATGTGCCTGCTCTGGGAATCCAAGAGCCTAAGTCAATGCCAAGTTTAA

CircID chr1:202142816|202143024
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MWIPVPEHSYSNTLGNEEIPRPSCISQT
Nucleotide Sequence CTGTGGATCCCTGTCCCAGAGCACAGCTATAGTAACACCCTGGGGAACGAGGAGATACCTAGGCCCAGCTGCATTTCTCAGACCTAA

CircID chr1:202142816|202143024
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MGSRRLGLRNAAGPRYLLVPQGVTIAVLWDRDPQVP
Nucleotide Sequence TTGGGTTCTAGGCGTTTAGGTCTGAGAAATGCAGCTGGGCCTAGGTATCTCCTCGTTCCCCAGGGTGTTACTATAGCTGTGCTCTGGGACAGGGATCCACAGGTACCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites