CircRNA Information

General Information
circRNA Basic Information
CircID chr1:202157831|202157947
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCCATCTAGGCCTACATACTATTGTCAAGAAGGAATGGCCAGAGTCCAGCTGTTCTAGAAAAAGGTAGAAGGAGAGAAAAGGAGGCTAGGAGTCAGCTGCTCACCCATTTCCTCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:202157831|202157947 hsa-miR-345-5p 0 0 1
chr1:202157831|202157947 hsa-miR-345-3p 0 0 1
chr1:202157831|202157947 hsa-miR-422a 0 1 1
chr1:202157831|202157947 hsa-miR-526b-5p 0 0 1
chr1:202157831|202157947 hsa-miR-526b-3p 0 0 1
chr1:202157831|202157947 hsa-miR-646 0 1 1
chr1:202157831|202157947 hsa-miR-1237-5p 0 0 1
chr1:202157831|202157947 hsa-miR-1237-3p 0 0 1
chr1:202157831|202157947 hsa-miR-1248 0 1 1
chr1:202157831|202157947 hsa-miR-1262 0 0 1
chr1:202157831|202157947 hsa-miR-1207-3p 0 0 1
chr1:202157831|202157947 hsa-miR-518d-5p 0 0 1
chr1:202157831|202157947 hsa-miR-519b-5p 0 0 1
chr1:202157831|202157947 hsa-miR-519c-5p 0 0 1
chr1:202157831|202157947 hsa-miR-520c-5p 0 0 1
chr1:202157831|202157947 hsa-miR-378 0 0 1
chr1:202157831|202157947 hsa-miR-526a 0 0 1
chr1:202157831|202157947 hsa-miR-612 1 0 0
chr1:202157831|202157947 hsa-miR-1281 1 0 0
chr1:202157831|202157947 hsa-miR-378c 0 1 0
chr1:202157831|202157947 hsa-miR-378e 0 1 0
chr1:202157831|202157947 hsa-miR-378f 0 1 0
chr1:202157831|202157947 hsa-miR-378h 0 1 0
chr1:202157831|202157947 hsa-miR-4506 0 1 0
chr1:202157831|202157947 hsa-miR-4522 1 0 0
chr1:202157831|202157947 hsa-miR-5093 0 1 0
chr1:202157831|202157947 hsa-miR-6825-5p 0 1 0
chr1:202157831|202157947 hsa-miR-766-5p 0 1 0
chr1:202157831|202157947 hsa-miR-6759-5p 1 0 0
chr1:202157831|202157947 hsa-miR-6873-3p 0 1 0
chr1:202157831|202157947 hsa-miR-3191-5p 1 0 0
chr1:202157831|202157947 hsa-miR-6878-3p 1 1 0
chr1:202157831|202157947 hsa-miR-6809-3p 1 0 0
chr1:202157831|202157947 hsa-miR-6797-5p 0 1 0
chr1:202157831|202157947 hsa-miR-6795-5p 1 1 0
chr1:202157831|202157947 hsa-miR-6736-5p 0 1 0
chr1:202157831|202157947 hsa-miR-6791-3p 1 1 0
chr1:202157831|202157947 hsa-miR-378a-3p 0 1 0
chr1:202157831|202157947 hsa-miR-6751-3p 1 0 0
chr1:202157831|202157947 hsa-miR-378d 0 1 0
chr1:202157831|202157947 hsa-miR-6764-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:202157831|202157947
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MSRRNGQSPAVLEKGRRREKEARSQLLTHFLP
Nucleotide Sequence TTGTCAAGAAGGAATGGCCAGAGTCCAGCTGTTCTAGAAAAAGGTAGAAGGAGAGAAAAGGAGGCTAGGAGTCAGCTGCTCACCCATTTCCTCCCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites