CircNet

General Information

circRNA Basic Information

CircID	chr1:202416787\|202569197
Strand	+
CircType	exon
Host Gene	ENSG00000077157.21;
Algorism	CIRI2;
Sequence	GCATGTATTGATGAAAATTTGGACATGGTGAAGTTTCTGGTGGAGAACAGAGCCAATGTAAACCAGCAAGACAACGAGGGCTGGACACCCCTTCATGCAGCAGCTTCCTGTGGCTATCTCAACATAGCAGAGAGTTGATCTAGAGCAGTCAAGAAAAGAAGAAGAGCAGCAGATGTTGCAGGATGCCCGCCAGTGGCTCAACAGTGGGAAAATAGAGGATGTGAGGCAGGCTCGCTCAGGGGCTACAGCCCTTCATGTGGCTGCTGCCAAGGGCTACTCTGAAGTCCTCAGCAGAAACAAGAAAAGACCTCTGACCGATCATCAGTGCTGGAGATGGAGAAACGGTCTCATTGTTCCGAAACAGGAGAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGGAGGAAGAAATGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr1:202416787\|202569197	hsa-miR-29b-1-5p	1	1
chr1:202416787\|202569197	hsa-miR-26b-3p	1	1
chr1:202416787\|202569197	hsa-miR-136-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:202416787\|202569197
ORF Type	ORF1
Protein Length	81
Nucleotide Length	243
Protein Sequence	MLQDARQWLNSGKIEDVRQARSGATALHVAAAKGYSEVLSRNKKRPLTDHQCWRWRNGLIVPKQERRALERKMSEMEEEMK
Nucleotide Sequence	ATGTTGCAGGATGCCCGCCAGTGGCTCAACAGTGGGAAAATAGAGGATGTGAGGCAGGCTCGCTCAGGGGCTACAGCCCTTCATGTGGCTGCTGCCAAGGGCTACTCTGAAGTCCTCAGCAGAAACAAGAAAAGACCTCTGACCGATCATCAGTGCTGGAGATGGAGAAACGGTCTCATTGTTCCGAAACAGGAGAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGGAGGAAGAAATGAAG

CircID	chr1:202416787\|202569197
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MVKFLVENRANVNQQDNEGWTPLHAAASCGYLNIAES*
Nucleotide Sequence	ATGGTGAAGTTTCTGGTGGAGAACAGAGCCAATGTAAACCAGCAAGACAACGAGGGCTGGACACCCCTTCATGCAGCAGCTTCCTGTGGCTATCTCAACATAGCAGAGAGTTGA

CircID	chr1:202416787\|202569197
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MKGCPALVVLLVYIGSVLHQKLHHVQIFINTC
Nucleotide Sequence	ATGAAGGGGTGTCCAGCCCTCGTTGTCTTGCTGGTTTACATTGGCTCTGTTCTCCACCAGAAACTTCACCATGTCCAAATTTTCATCAATACATGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:202416787\|202569197	ELAVL1	4	3	0
chr1:202416787\|202569197	NUMA1	0	1	0
chr1:202416787\|202569197	SF3B4	0	0	1
chr1:202416787\|202569197	PRPF8	0	1	3
chr1:202416787\|202569197	TAF15	1	4	0
chr1:202416787\|202569197	FMR1	0	0	2
chr1:202416787\|202569197	TIA1	0	1	0
chr1:202416787\|202569197	CPSF1	0	2	0
chr1:202416787\|202569197	FUS	0	2	0
chr1:202416787\|202569197	DGCR8	0	0	1
chr1:202416787\|202569197	SRSF1	0	0	5
chr1:202416787\|202569197	NOP58	0	2	2
chr1:202416787\|202569197	U2AF1	0	0	1
chr1:202416787\|202569197	U2AF2	0	4	1
chr1:202416787\|202569197	FIP1L1	0	1	0
chr1:202416787\|202569197	PTBP1	2	16	0
chr1:202416787\|202569197	HNRNPC	2	5	0
chr1:202416787\|202569197	TRA2A	0	0	6
chr1:202416787\|202569197	HNRNPA1	0	1	0
chr1:202416787\|202569197	RANGAP1	0	1	0
chr1:202416787\|202569197	BCCIP	0	0	1
chr1:202416787\|202569197	IGF2BP2	0	2	2
chr1:202416787\|202569197	HNRNPUL1	0	1	0
chr1:202416787\|202569197	TARDBP	1	2	0
chr1:202416787\|202569197	BUD13	1	0	4
chr1:202416787\|202569197	EIF4G2	0	0	1
chr1:202416787\|202569197	CSTF2T	1	1	0
chr1:202416787\|202569197	CSTF2	1	0	0
chr1:202416787\|202569197	RBM22	0	2	0
chr1:202416787\|202569197	TIAL1	0	1	0
chr1:202416787\|202569197	AGO2	0	2	0
chr1:202416787\|202569197	EIF4A3	1	5	8
chr1:202416787\|202569197	FBL	0	0	1

CircRNA Information