CircNet

General Information

circRNA Basic Information

CircID	chr1:202740674\|202746323
Strand	-
CircType	exon
Host Gene	ENSG00000117139.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGAGTGATTGATTCGGAAAGAATGGATTTTGAGCTGTTGCCAGATGATGAACGTCAGTGTGTAAAATGCAAAACTACATGCTTCATGTCTGCCATCTCCTGTTCTTGTAAACCTGGCCTTCTTGTTTGCCTGCATCATGTAAAAGAATTGTGTTCCTGTCCTCCTTACAAATATAAATTGCGGTATAGGTACACGCTGGATGATCTCTACCCTATGATGAATGCATTGAAGCTTCGAGCAGAATCTTACAACGAATGGGCCTTGAATGTGAATGAAGCTTTGGAGGCAAAGATCAACAAGAAGAAAAGCCTTGTCAGCTTCAAGGCTTTAATTGAAGAATCTGAAATGAAGAAATTCCCAGACAATGATCTTTTGCGACACCTTCGCCTAGTCACACAGGATGCAGAGAAGTGTGCCTCTGTTGCGCAGCAGTTGCTTAATGGCAAAAGGCAAACTAGATATCGATCTGGTGGAGGGAAATCCCAAAATCAGTTGACAGTGAATGAGCTCCGGCAGTTTGTAACACAGCTGTATGCTCTTCCATGTGTCCTCAGTCAGACACCATTACTAAAGGATCTCTTGAATCGTGTAGAAGATTTTCAACAGCATAGTCAGAAACTACTCTCTGAGGAAACGCCTAGTGCTGCGGAGCTGCAGGACTTGCTAGATGTCAGCTTTGAATTTGATGTTGAACTTCCACAGCTTGCTGAGATGCGTATCCGTTTGGAACAAGCCCGTTGGCTAGAAGAGGTGCAGCAAGCTTGCCTAGACCCCAGCTCCCTTACTTTAGATGATATGAGACGTCTCATAGACCTAGGGGTAGGGCTGGCCCCGTATTCAGCAGTGGAGAAAGCTATGGCCCGGCTGCAGGAACTGCTCACAGTGTCAGAGCACTGGGACGACAAAGCCAAGAGTCTCCTCAAGGCCAGGCCACGACATTCATTGAATAGCCTTGCTACGGCAGTAAAGGAAATCGAAGAGATCCCTGCATATCTGCCCAATGGTGCGGCTCTGAAAGACTCAGTGCAGAGAGCCAGAGACTGGCTTCAGGATGTAGAGGGCCTGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:202740674\|202746323	hsa-miR-604	1	1	1
chr1:202740674\|202746323	hsa-miR-658	1	1	1
chr1:202740674\|202746323	hsa-miR-2861	1	1	1
chr1:202740674\|202746323	hsa-miR-3135a	1	1	1
chr1:202740674\|202746323	hsa-miR-4734	1	1	1
chr1:202740674\|202746323	hsa-miR-4765	1	1	1
chr1:202740674\|202746323	hsa-miR-6069	1	1	1
chr1:202740674\|202746323	hsa-miR-146a-3p	1	1	1
chr1:202740674\|202746323	hsa-miR-26b-3p	1	1	1
chr1:202740674\|202746323	hsa-miR-6880-5p	1	1	1
chr1:202740674\|202746323	hsa-miR-28-3p	1	1	1
chr1:202740674\|202746323	hsa-miR-2467-3p	1	1	1
chr1:202740674\|202746323	hsa-miR-6782-5p	1	1	1
chr1:202740674\|202746323	hsa-miR-6894-3p	1	1	1
chr1:202740674\|202746323	hsa-miR-4776-3p	1	1	1
chr1:202740674\|202746323	hsa-miR-7152-5p	1	1	1
chr1:202740674\|202746323	hsa-miR-3670	1	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:202740674\|202746323
ORF Type	ORF1
Protein Length	349
Nucleotide Length	1047
Protein Sequence	MDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDWLQDVEGLQ
Nucleotide Sequence	ATGGATTTTGAGCTGTTGCCAGATGATGAACGTCAGTGTGTAAAATGCAAAACTACATGCTTCATGTCTGCCATCTCCTGTTCTTGTAAACCTGGCCTTCTTGTTTGCCTGCATCATGTAAAAGAATTGTGTTCCTGTCCTCCTTACAAATATAAATTGCGGTATAGGTACACGCTGGATGATCTCTACCCTATGATGAATGCATTGAAGCTTCGAGCAGAATCTTACAACGAATGGGCCTTGAATGTGAATGAAGCTTTGGAGGCAAAGATCAACAAGAAGAAAAGCCTTGTCAGCTTCAAGGCTTTAATTGAAGAATCTGAAATGAAGAAATTCCCAGACAATGATCTTTTGCGACACCTTCGCCTAGTCACACAGGATGCAGAGAAGTGTGCCTCTGTTGCGCAGCAGTTGCTTAATGGCAAAAGGCAAACTAGATATCGATCTGGTGGAGGGAAATCCCAAAATCAGTTGACAGTGAATGAGCTCCGGCAGTTTGTAACACAGCTGTATGCTCTTCCATGTGTCCTCAGTCAGACACCATTACTAAAGGATCTCTTGAATCGTGTAGAAGATTTTCAACAGCATAGTCAGAAACTACTCTCTGAGGAAACGCCTAGTGCTGCGGAGCTGCAGGACTTGCTAGATGTCAGCTTTGAATTTGATGTTGAACTTCCACAGCTTGCTGAGATGCGTATCCGTTTGGAACAAGCCCGTTGGCTAGAAGAGGTGCAGCAAGCTTGCCTAGACCCCAGCTCCCTTACTTTAGATGATATGAGACGTCTCATAGACCTAGGGGTAGGGCTGGCCCCGTATTCAGCAGTGGAGAAAGCTATGGCCCGGCTGCAGGAACTGCTCACAGTGTCAGAGCACTGGGACGACAAAGCCAAGAGTCTCCTCAAGGCCAGGCCACGACATTCATTGAATAGCCTTGCTACGGCAGTAAAGGAAATCGAAGAGATCCCTGCATATCTGCCCAATGGTGCGGCTCTGAAAGACTCAGTGCAGAGAGCCAGAGACTGGCTTCAGGATGTAGAGGGCCTGCAG

CircID	chr1:202740674\|202746323
ORF Type	ORF2
Protein Length	130
Nucleotide Length	390
Protein Sequence	LGRYAGISSISFTAVARLFNECRGLALRRLLALSSQCSDTVSSSCSRAIAFSTAEYGASPTPRSMRRLISSKVRELGSRQACCTSSSQRACSKRIRISASCGSSTSNSKLTSSKSCSSAALGVSSESSF*
Nucleotide Sequence	TTGGGCAGATATGCAGGGATCTCTTCGATTTCCTTTACTGCCGTAGCAAGGCTATTCAATGAATGTCGTGGCCTGGCCTTGAGGAGACTCTTGGCTTTGTCGTCCCAGTGCTCTGACACTGTGAGCAGTTCCTGCAGCCGGGCCATAGCTTTCTCCACTGCTGAATACGGGGCCAGCCCTACCCCTAGGTCTATGAGACGTCTCATATCATCTAAAGTAAGGGAGCTGGGGTCTAGGCAAGCTTGCTGCACCTCTTCTAGCCAACGGGCTTGTTCCAAACGGATACGCATCTCAGCAAGCTGTGGAAGTTCAACATCAAATTCAAAGCTGACATCTAGCAAGTCCTGCAGCTCCGCAGCACTAGGCGTTTCCTCAGAGAGTAGTTTCTGA

CircID	chr1:202740674\|202746323
ORF Type	ORF3
Protein Length	109
Nucleotide Length	327
Protein Sequence	SLEADKAFLLVDLCLQSFIHIQGPFVVRFCSKLQCIHHRVEIIQRVPIPQFIFVRRTGTQFFYMMQANKKARFTRTGDGRHEACSFAFYTLTFIIWQQLKIHSFRINHS
Nucleotide Sequence	AGCCTTGAAGCTGACAAGGCTTTTCTTCTTGTTGATCTTTGCCTCCAAAGCTTCATTCACATTCAAGGCCCATTCGTTGTAAGATTCTGCTCGAAGCTTCAATGCATTCATCATAGGGTAGAGATCATCCAGCGTGTACCTATACCGCAATTTATATTTGTAAGGAGGACAGGAACACAATTCTTTTACATGATGCAGGCAAACAAGAAGGCCAGGTTTACAAGAACAGGAGATGGCAGACATGAAGCATGTAGTTTTGCATTTTACACACTGACGTTCATCATCTGGCAACAGCTCAAAATCCATTCTTTCCGAATCAATCACTCC

CircID	chr1:202740674\|202746323
ORF Type	ORF4
Protein Length	32
Nucleotide Length	96
Protein Sequence	MQRSVPLLRSSCLMAKGKLDIDLVEGNPKIS*
Nucleotide Sequence	ATGCAGAGAAGTGTGCCTCTGTTGCGCAGCAGTTGCTTAATGGCAAAAGGCAAACTAGATATCGATCTGGTGGAGGGAAATCCCAAAATCAGTTGA

CircID	chr1:202740674\|202746323
ORF Type	ORF5
Protein Length	30
Nucleotide Length	90
Protein Sequence	MEEHTAVLQTAGAHSLSTDFGISLHQIDI*
Nucleotide Sequence	ATGGAAGAGCATACAGCTGTGTTACAAACTGCCGGAGCTCATTCACTGTCAACTGATTTTGGGATTTCCCTCCACCAGATCGATATCTAG

CircID	chr1:202740674\|202746323
ORF Type	ORF6
Protein Length	67
Nucleotide Length	201
Protein Sequence	LPLSNCCATEAHFSASCVTRRRCRKRSLSGNFFISDSSIKALKLTRLFFLLIFASKASFTFKAHSL*
Nucleotide Sequence	TTGCCATTAAGCAACTGCTGCGCAACAGAGGCACACTTCTCTGCATCCTGTGTGACTAGGCGAAGGTGTCGCAAAAGATCATTGTCTGGGAATTTCTTCATTTCAGATTCTTCAATTAAAGCCTTGAAGCTGACAAGGCTTTTCTTCTTGTTGATCTTTGCCTCCAAAGCTTCATTCACATTCAAGGCCCATTCGTTGTAA

CircID	chr1:202740674\|202746323
ORF Type	ORF7
Protein Length	52
Nucleotide Length	156
Protein Sequence	YETSHRPRGRAGPVFSSGESYGPAAGTAHSVRALGRQSQESPQGQATTFIE*
Nucleotide Sequence	TATGAGACGTCTCATAGACCTAGGGGTAGGGCTGGCCCCGTATTCAGCAGTGGAGAAAGCTATGGCCCGGCTGCAGGAACTGCTCACAGTGTCAGAGCACTGGGACGACAAAGCCAAGAGTCTCCTCAAGGCCAGGCCACGACATTCATTGAATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:202740674\|202746323	NOP56	1	0	0
chr1:202740674\|202746323	MOV10	0	1	0
chr1:202740674\|202746323	ELAVL1	4	0	2
chr1:202740674\|202746323	ELAVL3	1	0	0
chr1:202740674\|202746323	CELF2	0	0	1
chr1:202740674\|202746323	PRPF8	0	1	1
chr1:202740674\|202746323	UPF1	1	0	0
chr1:202740674\|202746323	TNRC6A	0	1	1
chr1:202740674\|202746323	FMR1	0	3	29
chr1:202740674\|202746323	CPSF6	0	0	1
chr1:202740674\|202746323	CNBP	0	1	0
chr1:202740674\|202746323	TROVE2	0	1	0
chr1:202740674\|202746323	FUS	2	0	1
chr1:202740674\|202746323	DGCR8	0	0	1
chr1:202740674\|202746323	SRSF1	0	0	5
chr1:202740674\|202746323	NOP58	1	0	4
chr1:202740674\|202746323	SRSF3	0	0	1
chr1:202740674\|202746323	U2AF1	0	1	2
chr1:202740674\|202746323	U2AF2	8	0	4
chr1:202740674\|202746323	SRSF9	0	0	2
chr1:202740674\|202746323	DDX54	0	0	26
chr1:202740674\|202746323	HNRNPK	1	0	0
chr1:202740674\|202746323	SF3A3	1	0	2
chr1:202740674\|202746323	PTBP1	0	0	2
chr1:202740674\|202746323	TRA2A	0	0	4
chr1:202740674\|202746323	HNRNPA1	1	0	0
chr1:202740674\|202746323	LARP7	0	0	1
chr1:202740674\|202746323	SMNDC1	0	0	2
chr1:202740674\|202746323	ACIN1	0	0	8
chr1:202740674\|202746323	LIN28B	1	1	2
chr1:202740674\|202746323	RANGAP1	0	1	1
chr1:202740674\|202746323	FXR1	0	0	11
chr1:202740674\|202746323	FXR2	0	1	11
chr1:202740674\|202746323	SND1	0	0	2
chr1:202740674\|202746323	IGF2BP1	0	0	4
chr1:202740674\|202746323	DICER1	1	0	0
chr1:202740674\|202746323	IGF2BP2	1	0	7
chr1:202740674\|202746323	TARDBP	1	0	4
chr1:202740674\|202746323	TAF15	0	1	0
chr1:202740674\|202746323	BUD13	1	0	2
chr1:202740674\|202746323	RBFOX2	2	1	0
chr1:202740674\|202746323	RBM47	1	0	1
chr1:202740674\|202746323	SLTM	0	0	1
chr1:202740674\|202746323	DDX42	0	1	0
chr1:202740674\|202746323	CSTF2T	0	0	4
chr1:202740674\|202746323	AGO2	0	0	4
chr1:202740674\|202746323	EIF4A3	4	2	15
chr1:202740674\|202746323	FBL	0	1	5

CircRNA Information