CircRNA Information

General Information
circRNA Basic Information
CircID chr1:203341033|203341384
Strand -
CircType exon
Host Gene ENSG00000122176.10;
Algorism CIRI2;
Sequence CTTTTGAAATGGGAAGAATTAAGTGCTCCCCAGCCAAACTATAAAGCAAAAGCCACCTTCACTAATGAGGATATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAGGACAAACCAGGTGAAACAGATTAACCACATCCTCCTTCTTTGGGCTAGCAAGTCCAGGGCTGCCTGGAGTCTGTCTCTACCATCAGGATATAGAATCTTCCTGCTTGGATAAAAGGAGAGGACAAACTGTGTTTCTCATACTTTAAAAACCATGTGGCCGCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:203341033|203341384 hsa-miR-23a-5p 0 0 1
chr1:203341033|203341384 hsa-miR-23a-3p 0 0 1
chr1:203341033|203341384 hsa-miR-23b-5p 0 0 1
chr1:203341033|203341384 hsa-miR-23b-3p 0 0 1
chr1:203341033|203341384 hsa-miR-149-5p 0 0 1
chr1:203341033|203341384 hsa-miR-149-3p 0 0 1
chr1:203341033|203341384 hsa-miR-379-5p 0 0 1
chr1:203341033|203341384 hsa-miR-379-3p 0 0 1
chr1:203341033|203341384 hsa-miR-422a 0 1 1
chr1:203341033|203341384 hsa-miR-493-5p 0 0 1
chr1:203341033|203341384 hsa-miR-493-3p 0 0 1
chr1:203341033|203341384 hsa-miR-539-5p 0 0 1
chr1:203341033|203341384 hsa-miR-539-3p 0 0 1
chr1:203341033|203341384 hsa-miR-559 0 0 1
chr1:203341033|203341384 hsa-miR-607 0 0 1
chr1:203341033|203341384 hsa-miR-610 0 0 1
chr1:203341033|203341384 hsa-miR-612 0 0 1
chr1:203341033|203341384 hsa-miR-621 0 0 1
chr1:203341033|203341384 hsa-miR-634 0 0 1
chr1:203341033|203341384 hsa-miR-647 0 0 1
chr1:203341033|203341384 hsa-miR-921 0 0 1
chr1:203341033|203341384 hsa-miR-939-5p 0 0 1
chr1:203341033|203341384 hsa-miR-939-3p 0 0 1
chr1:203341033|203341384 hsa-miR-548j-5p 0 0 1
chr1:203341033|203341384 hsa-miR-548j-3p 0 0 1
chr1:203341033|203341384 hsa-miR-548k 0 0 1
chr1:203341033|203341384 hsa-miR-548l 0 0 1
chr1:203341033|203341384 hsa-miR-548n 0 0 1
chr1:203341033|203341384 hsa-miR-1265 0 1 1
chr1:203341033|203341384 hsa-miR-615-5p 0 1 1
chr1:203341033|203341384 hsa-miR-508-5p 0 0 1
chr1:203341033|203341384 hsa-miR-548b-5p 0 0 1
chr1:203341033|203341384 hsa-miR-548d-5p 0 0 1
chr1:203341033|203341384 hsa-miR-548c-5p 0 0 1
chr1:203341033|203341384 hsa-miR-548a-5p 0 0 1
chr1:203341033|203341384 hsa-miR-548i 0 0 1
chr1:203341033|203341384 hsa-miR-378 0 0 1
chr1:203341033|203341384 hsa-miR-1285 0 0 1
chr1:203341033|203341384 hsa-miR-548h 0 0 1
chr1:203341033|203341384 hsa-miR-588 1 0 0
chr1:203341033|203341384 hsa-miR-762 1 0 0
chr1:203341033|203341384 hsa-miR-378b 0 1 0
chr1:203341033|203341384 hsa-miR-378c 0 1 0
chr1:203341033|203341384 hsa-miR-3921 0 1 0
chr1:203341033|203341384 hsa-miR-378e 0 1 0
chr1:203341033|203341384 hsa-miR-378f 0 1 0
chr1:203341033|203341384 hsa-miR-378h 0 1 0
chr1:203341033|203341384 hsa-miR-4492 1 0 0
chr1:203341033|203341384 hsa-miR-4514 0 1 0
chr1:203341033|203341384 hsa-miR-4525 1 0 0
chr1:203341033|203341384 hsa-miR-378i 0 1 0
chr1:203341033|203341384 hsa-miR-3960 1 0 0
chr1:203341033|203341384 hsa-miR-4673 0 1 0
chr1:203341033|203341384 hsa-miR-5787 1 1 0
chr1:203341033|203341384 hsa-miR-8054 0 1 0
chr1:203341033|203341384 hsa-miR-8068 0 1 0
chr1:203341033|203341384 hsa-miR-12115 1 0 0
chr1:203341033|203341384 hsa-miR-4731-5p 0 1 0
chr1:203341033|203341384 hsa-miR-7155-5p 0 1 0
chr1:203341033|203341384 hsa-miR-4665-3p 1 0 0
chr1:203341033|203341384 hsa-miR-671-5p 1 1 0
chr1:203341033|203341384 hsa-miR-7106-5p 1 0 0
chr1:203341033|203341384 hsa-miR-6894-5p 1 0 0
chr1:203341033|203341384 hsa-miR-1972 0 1 0
chr1:203341033|203341384 hsa-miR-6799-5p 1 0 0
chr1:203341033|203341384 hsa-miR-3663-3p 1 0 0
chr1:203341033|203341384 hsa-miR-6515-5p 1 0 0
chr1:203341033|203341384 hsa-miR-6880-5p 1 0 0
chr1:203341033|203341384 hsa-miR-3677-5p 1 0 0
chr1:203341033|203341384 hsa-miR-4753-5p 0 1 0
chr1:203341033|203341384 hsa-miR-6842-3p 0 1 0
chr1:203341033|203341384 hsa-let-7c-3p 0 1 0
chr1:203341033|203341384 hsa-miR-6798-5p 1 0 0
chr1:203341033|203341384 hsa-miR-3126-5p 1 0 0
chr1:203341033|203341384 hsa-miR-6765-3p 0 1 0
chr1:203341033|203341384 hsa-miR-6728-3p 0 1 0
chr1:203341033|203341384 hsa-miR-1226-5p 1 0 0
chr1:203341033|203341384 hsa-miR-4743-5p 1 0 0
chr1:203341033|203341384 hsa-miR-3690 0 1 0
chr1:203341033|203341384 hsa-miR-6830-5p 1 1 0
chr1:203341033|203341384 hsa-miR-6811-3p 0 1 0
chr1:203341033|203341384 hsa-miR-2276-5p 0 1 0
chr1:203341033|203341384 hsa-miR-1914-5p 0 1 0
chr1:203341033|203341384 hsa-miR-6770-3p 1 0 0
chr1:203341033|203341384 hsa-miR-4524a-3p 0 1 0
chr1:203341033|203341384 hsa-miR-624-5p 0 1 0
chr1:203341033|203341384 hsa-miR-584-5p 1 1 0
chr1:203341033|203341384 hsa-miR-676-3p 1 1 0
chr1:203341033|203341384 hsa-miR-5585-5p 0 1 0
chr1:203341033|203341384 hsa-let-7b-3p 0 1 0
chr1:203341033|203341384 hsa-miR-6754-5p 1 0 0
chr1:203341033|203341384 hsa-miR-6756-5p 1 0 0
chr1:203341033|203341384 hsa-miR-6851-5p 1 0 0
chr1:203341033|203341384 hsa-miR-3620-5p 1 0 0
chr1:203341033|203341384 hsa-miR-6848-5p 1 0 0
chr1:203341033|203341384 hsa-miR-6885-5p 1 0 0
chr1:203341033|203341384 hsa-miR-3940-5p 1 0 0
chr1:203341033|203341384 hsa-miR-1285-3p 0 1 0
chr1:203341033|203341384 hsa-miR-6891-5p 1 1 0
chr1:203341033|203341384 hsa-miR-378a-3p 0 1 0
chr1:203341033|203341384 hsa-miR-4667-5p 0 1 0
chr1:203341033|203341384 hsa-miR-6790-5p 1 0 0
chr1:203341033|203341384 hsa-miR-9851-3p 1 0 0
chr1:203341033|203341384 hsa-miR-6504-5p 0 1 0
chr1:203341033|203341384 hsa-miR-4676-3p 1 0 0
chr1:203341033|203341384 hsa-miR-378d 0 1 0
chr1:203341033|203341384 hsa-let-7f-1-3p 0 1 0
chr1:203341033|203341384 hsa-let-7a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:203341033|203341384
ORF Type ORF1
Protein Length 98
Nucleotide Length 297
Protein Sequence MKWEELSAPQPNYKAKATFTNEDIAQRCESRGLYAQHRQDLAAWPGLHGPQPELVLFNYGLRTNQVKQINHILLLWASKSRAAWSLSLPSGYRIFLLG
Nucleotide Sequence TTGAAATGGGAAGAATTAAGTGCTCCCCAGCCAAACTATAAAGCAAAAGCCACCTTCACTAATGAGGATATAGCTCAGAGATGTGAAAGCAGAGGGTTGTATGCCCAGCACAGGCAAGATTTGGCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAGGACAAACCAGGTGAAACAGATTAACCACATCCTCCTTCTTTGGGCTAGCAAGTCCAGGGCTGCCTGGAGTCTGTCTCTACCATCAGGATATAGAATCTTCCTGCTTGGATAA

CircID chr1:203341033|203341384
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MPSTGKIWLPGLGFTDPSQSWYFLTMALGQTR
Nucleotide Sequence ATGCCCAGCACAGGCAAGATTTGGCTGCCTGGCCTGGGCTTCACGGACCCCAGCCAGAGCTGGTACTTTTTAACTATGGCCTTAGGACAAACCAGGTGA

CircID chr1:203341033|203341384
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MPGVCLYHQDIESSCLDKRRGQTVFLIL
Nucleotide Sequence CTGCCTGGAGTCTGTCTCTACCATCAGGATATAGAATCTTCCTGCTTGGATAAAAGGAGAGGACAAACTGTGTTTCTCATACTTTAA

CircID chr1:203341033|203341384
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MSSPFIQAGRFYILMVETDSRQPWTC
Nucleotide Sequence TTGTCCTCTCCTTTTATCCAAGCAGGAAGATTCTATATCCTGATGGTAGAGACAGACTCCAGGCAGCCCTGGACTTGCTAG

CircID chr1:203341033|203341384
ORF Type ORF5
Protein Length 32
Nucleotide Length 99
Protein Sequence MAGVREAQARQPNLACAGHTTLCFHISELYPH
Nucleotide Sequence CTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTATATCCTCATTAG

CircID chr1:203341033|203341384
ORF Type ORF6
Protein Length 62
Nucleotide Length 189
Protein Sequence MFHLVCPKAIVKKYQLWLGSVKPRPGSQILPVLGIQPSAFTSLSYILISEGGFCFIVWLGST
Nucleotide Sequence CTGTTTCACCTGGTTTGTCCTAAGGCCATAGTTAAAAAGTACCAGCTCTGGCTGGGGTCCGTGAAGCCCAGGCCAGGCAGCCAAATCTTGCCTGTGCTGGGCATACAACCCTCTGCTTTCACATCTCTGAGCTATATCCTCATTAGTGAAGGTGGCTTTTGCTTTATAGTTTGGCTGGGGAGCACTTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites