CircRNA Information

General Information
circRNA Basic Information
CircID chr1:203341747|203342071
Strand +
CircType exon
Host Gene ENSG00000122176.10;
Algorism CIRI2;
Sequence GGCTCTTAAGTTCTTCCCAATGATCTGAGGTCATGGAACTTCAAAAGTGGCATGGGCAATAGTATATAACCATACTTTTCTAACAATCCCTGGCTGTCTGTGAGCAGCACTTGACAGCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCCCAGCTGCCTCTTCTGAAATCCACTTCACCCACTCCACTTTCCTCCACAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACCCACA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:203341747|203342071 hsa-miR-31-5p 0 0 1
chr1:203341747|203342071 hsa-miR-31-3p 0 0 1
chr1:203341747|203342071 hsa-miR-122-5p 0 0 1
chr1:203341747|203342071 hsa-miR-122-3p 0 0 1
chr1:203341747|203342071 hsa-miR-302a-5p 0 0 1
chr1:203341747|203342071 hsa-miR-302a-3p 0 0 1
chr1:203341747|203342071 hsa-miR-302b-5p 0 0 1
chr1:203341747|203342071 hsa-miR-302b-3p 0 0 1
chr1:203341747|203342071 hsa-miR-302c-5p 0 0 1
chr1:203341747|203342071 hsa-miR-302c-3p 0 0 1
chr1:203341747|203342071 hsa-miR-302d-5p 0 0 1
chr1:203341747|203342071 hsa-miR-302d-3p 0 0 1
chr1:203341747|203342071 hsa-miR-372-5p 0 0 1
chr1:203341747|203342071 hsa-miR-372-3p 0 0 1
chr1:203341747|203342071 hsa-miR-373-5p 0 0 1
chr1:203341747|203342071 hsa-miR-373-3p 0 0 1
chr1:203341747|203342071 hsa-miR-345-5p 0 0 1
chr1:203341747|203342071 hsa-miR-345-3p 0 0 1
chr1:203341747|203342071 hsa-miR-202-5p 0 0 1
chr1:203341747|203342071 hsa-miR-202-3p 0 0 1
chr1:203341747|203342071 hsa-miR-520e-5p 0 0 1
chr1:203341747|203342071 hsa-miR-520e-3p 0 0 1
chr1:203341747|203342071 hsa-miR-520b-5p 0 0 1
chr1:203341747|203342071 hsa-miR-520b-3p 0 0 1
chr1:203341747|203342071 hsa-miR-506-5p 0 0 1
chr1:203341747|203342071 hsa-miR-506-3p 0 0 1
chr1:203341747|203342071 hsa-miR-573 0 0 1
chr1:203341747|203342071 hsa-miR-580-5p 0 0 1
chr1:203341747|203342071 hsa-miR-580-3p 0 0 1
chr1:203341747|203342071 hsa-miR-584-5p 0 0 1
chr1:203341747|203342071 hsa-miR-584-3p 0 0 1
chr1:203341747|203342071 hsa-miR-612 1 0 1
chr1:203341747|203342071 hsa-miR-765 1 0 1
chr1:203341747|203342071 hsa-miR-920 0 0 1
chr1:203341747|203342071 hsa-miR-1178-5p 0 0 1
chr1:203341747|203342071 hsa-miR-1178-3p 0 0 1
chr1:203341747|203342071 hsa-miR-1290 0 0 1
chr1:203341747|203342071 hsa-miR-548l 0 0 1
chr1:203341747|203342071 hsa-miR-1253 0 0 1
chr1:203341747|203342071 hsa-miR-1262 0 0 1
chr1:203341747|203342071 hsa-miR-548n 0 0 1
chr1:203341747|203342071 hsa-miR-302e 0 0 1
chr1:203341747|203342071 hsa-miR-1324 0 0 1
chr1:203341747|203342071 hsa-miR-1827 0 0 1
chr1:203341747|203342071 hsa-miR-512-3p 0 0 1
chr1:203341747|203342071 hsa-miR-615-5p 0 0 1
chr1:203341747|203342071 hsa-miR-532-5p 0 0 1
chr1:203341747|203342071 hsa-miR-1207-3p 0 0 1
chr1:203341747|203342071 hsa-miR-767-3p 0 0 1
chr1:203341747|203342071 hsa-miR-520d-3p 0 0 1
chr1:203341747|203342071 hsa-miR-876-5p 0 0 1
chr1:203341747|203342071 hsa-miR-520a-3p 0 0 1
chr1:203341747|203342071 hsa-miR-520c-3p 0 0 1
chr1:203341747|203342071 hsa-miR-124 0 0 1
chr1:203341747|203342071 hsa-miR-1300 0 0 1
chr1:203341747|203342071 hsa-miR-1285 0 0 1
chr1:203341747|203342071 hsa-miR-453 0 0 1
chr1:203341747|203342071 hsa-miR-608 1 0 0
chr1:203341747|203342071 hsa-miR-762 1 0 0
chr1:203341747|203342071 hsa-miR-764 1 0 0
chr1:203341747|203342071 hsa-miR-3132 1 0 0
chr1:203341747|203342071 hsa-miR-3147 1 0 0
chr1:203341747|203342071 hsa-miR-3153 1 0 0
chr1:203341747|203342071 hsa-miR-3154 1 0 0
chr1:203341747|203342071 hsa-miR-4330 1 0 0
chr1:203341747|203342071 hsa-miR-3612 1 0 0
chr1:203341747|203342071 hsa-miR-3911 1 0 0
chr1:203341747|203342071 hsa-miR-3937 1 0 0
chr1:203341747|203342071 hsa-miR-4450 1 0 0
chr1:203341747|203342071 hsa-miR-4481 1 0 0
chr1:203341747|203342071 hsa-miR-4507 1 0 0
chr1:203341747|203342071 hsa-miR-1587 1 0 0
chr1:203341747|203342071 hsa-miR-3960 1 0 0
chr1:203341747|203342071 hsa-miR-4634 1 0 0
chr1:203341747|203342071 hsa-miR-4641 1 0 0
chr1:203341747|203342071 hsa-miR-4651 1 0 0
chr1:203341747|203342071 hsa-miR-4689 1 0 0
chr1:203341747|203342071 hsa-miR-5090 1 0 0
chr1:203341747|203342071 hsa-miR-5192 1 0 0
chr1:203341747|203342071 hsa-miR-5572 1 0 0
chr1:203341747|203342071 hsa-miR-5685 1 0 0
chr1:203341747|203342071 hsa-miR-5698 1 0 0
chr1:203341747|203342071 hsa-miR-6165 1 0 0
chr1:203341747|203342071 hsa-miR-6860 1 0 0
chr1:203341747|203342071 hsa-miR-12114 1 0 0
chr1:203341747|203342071 hsa-miR-12115 1 0 0
chr1:203341747|203342071 hsa-miR-12122 1 0 0
chr1:203341747|203342071 hsa-miR-12127 1 0 0
chr1:203341747|203342071 hsa-miR-4433b-3p 1 0 0
chr1:203341747|203342071 hsa-miR-504-3p 1 0 0
chr1:203341747|203342071 hsa-miR-6747-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6765-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6861-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6825-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6894-5p 1 0 0
chr1:203341747|203342071 hsa-miR-8071 1 0 0
chr1:203341747|203342071 hsa-miR-766-5p 1 0 0
chr1:203341747|203342071 hsa-miR-7114-5p 1 0 0
chr1:203341747|203342071 hsa-miR-1225-3p 1 0 0
chr1:203341747|203342071 hsa-miR-6880-5p 1 0 0
chr1:203341747|203342071 hsa-miR-7847-3p 1 0 0
chr1:203341747|203342071 hsa-miR-4695-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6730-5p 1 0 0
chr1:203341747|203342071 hsa-miR-7154-3p 1 0 0
chr1:203341747|203342071 hsa-miR-6721-5p 1 0 0
chr1:203341747|203342071 hsa-miR-197-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6742-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6871-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6748-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6772-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6793-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6796-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6827-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6782-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6514-5p 1 0 0
chr1:203341747|203342071 hsa-miR-3194-5p 1 0 0
chr1:203341747|203342071 hsa-miR-885-3p 1 0 0
chr1:203341747|203342071 hsa-miR-149-3p 1 0 0
chr1:203341747|203342071 hsa-miR-6781-5p 1 0 0
chr1:203341747|203342071 hsa-miR-1207-5p 1 0 0
chr1:203341747|203342071 hsa-miR-1233-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6769b-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6812-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6893-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6775-5p 1 0 0
chr1:203341747|203342071 hsa-miR-5001-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6737-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6756-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6769a-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6819-5p 1 0 0
chr1:203341747|203342071 hsa-miR-10401-5p 1 0 0
chr1:203341747|203342071 hsa-miR-11181-3p 1 0 0
chr1:203341747|203342071 hsa-miR-1249-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6774-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6780a-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6788-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6797-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6879-5p 1 0 0
chr1:203341747|203342071 hsa-miR-3620-5p 1 0 0
chr1:203341747|203342071 hsa-miR-5189-5p 1 0 0
chr1:203341747|203342071 hsa-miR-5196-5p 1 0 0
chr1:203341747|203342071 hsa-miR-4632-5p 1 0 0
chr1:203341747|203342071 hsa-miR-4649-5p 1 0 0
chr1:203341747|203342071 hsa-miR-4701-3p 1 0 0
chr1:203341747|203342071 hsa-miR-4726-5p 1 0 0
chr1:203341747|203342071 hsa-miR-4745-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6729-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6738-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6858-5p 1 0 0
chr1:203341747|203342071 hsa-miR-4436b-3p 1 0 0
chr1:203341747|203342071 hsa-miR-6831-5p 1 0 0
chr1:203341747|203342071 hsa-miR-939-5p 1 0 0
chr1:203341747|203342071 hsa-miR-4758-5p 1 0 0
chr1:203341747|203342071 hsa-miR-3198 1 0 0
chr1:203341747|203342071 hsa-miR-6856-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6736-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6855-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6876-5p 1 0 0
chr1:203341747|203342071 hsa-miR-4716-3p 1 0 0
chr1:203341747|203342071 hsa-miR-6849-5p 1 0 0
chr1:203341747|203342071 hsa-miR-6843-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:203341747|203342071
ORF Type ORF1
Protein Length 51
Nucleotide Length 156
Protein Sequence MVVQLLWAPICCFSKYTSCPAASSEIHFTHSTFLHRCLFCALSRVRRPQGM
Nucleotide Sequence CTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCCCAGCTGCCTCTTCTGAAATCCACTTCACCCACTCCACTTTCCTCCACAGATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGA
CircID chr1:203341747|203342071
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MGWSCSYSGLPFVASQNIPLAQLPLLKSTSPTPLSSTDASSVP
Nucleotide Sequence CTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCCCAGCTGCCTCTTCTGAAATCCACTTCACCCACTCCACTTTCCTCCACAGATGCCTCTTCTGTGCCTTAA
CircID chr1:203341747|203342071
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MAVCEQHLTALPLCWAGRAVTLGSHLLLLKIYLLPSCLF
Nucleotide Sequence CTGGCTGTCTGTGAGCAGCACTTGACAGCTCTCCCTCTGTGCTGGGCTGGTCGTGCAGTTACTCTGGGCTCCCATTTGTTGCTTCTCAAAATATACCTCTTGCCCAGCTGCCTCTTCTGA
CircID chr1:203341747|203342071
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MPLLCLKQSQETPRHVSICPATCGDNP
Nucleotide Sequence ATGCCTCTTCTGTGCCTTAAGCAGAGTCAGGAGACCCCAAGGCATGTGAGCATCTGCCCAGCAACCTGTGGAGACAACCCA
CircID chr1:203341747|203342071
ORF Type ORF5
Protein Length 38
Nucleotide Length 117
Protein Sequence MGKRYILRSNKWEPRVTARPAQHRGRAVKCCSQTARDC
Nucleotide Sequence CTGGGCAAGAGGTATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCTGTCAAGTGCTGCTCACAGACAGCCAGGGATTGTTAG
CircID chr1:203341747|203342071
ORF Type ORF6
Protein Length 38
Nucleotide Length 117
Protein Sequence MHDQPSTEGELSSAAHRQPGIVRKVWLYTIAHATFEVP
Nucleotide Sequence CTGCACGACCAGCCCAGCACAGAGGGAGAGCTGTCAAGTGCTGCTCACAGACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTTTGAAGTTCCATGA
CircID chr1:203341747|203342071
ORF Type ORF7
Protein Length 93
Nucleotide Length 282
Protein Sequence MPWGLLTLLKAQKRHLWRKVEWVKWISEEAAGQEVYFEKQQMGAQSNCTTSPAQRESCQVLLTDSQGLLEKYGYILLPMPLLKFHDLRSLGRT
Nucleotide Sequence ATGCCTTGGGGTCTCCTGACTCTGCTTAAGGCACAGAAGAGGCATCTGTGGAGGAAAGTGGAGTGGGTGAAGTGGATTTCAGAAGAGGCAGCTGGGCAAGAGGTATATTTTGAGAAGCAACAAATGGGAGCCCAGAGTAACTGCACGACCAGCCCAGCACAGAGGGAGAGCTGTCAAGTGCTGCTCACAGACAGCCAGGGATTGTTAGAAAAGTATGGTTATATACTATTGCCCATGCCACTTTTGAAGTTCCATGACCTCAGATCATTGGGAAGAACTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab