CircRNA Information

General Information
circRNA Basic Information
CircID chr1:203736726|203736907
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTCTTCACTAGCCCTGTCTTGTCCCCATACACTGCTCATGCACCAGGCATCATGCTCCAGGAAGGGGAGATGCCAGCCCTGGGTGGATTGGTGGTGATATAGTGCATGATTGTTCATCAGCATGTGTTCTCTGAGGCCAGTGCTGGAGTTGGGGCATCCTGGCACAGCCCCATGCCCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:203736726|203736907 hsa-miR-197-5p 0 0 1
chr1:203736726|203736907 hsa-miR-197-3p 0 0 1
chr1:203736726|203736907 hsa-miR-193b-5p 0 0 1
chr1:203736726|203736907 hsa-miR-193b-3p 0 0 1
chr1:203736726|203736907 hsa-miR-661 0 0 1
chr1:203736726|203736907 hsa-miR-766-5p 0 0 1
chr1:203736726|203736907 hsa-miR-766-3p 0 0 1
chr1:203736726|203736907 hsa-miR-1227-5p 0 0 1
chr1:203736726|203736907 hsa-miR-1227-3p 0 0 1
chr1:203736726|203736907 hsa-miR-1322 0 0 1
chr1:203736726|203736907 hsa-miR-508-5p 0 1 1
chr1:203736726|203736907 hsa-miR-338-3p 0 0 1
chr1:203736726|203736907 hsa-miR-193a-3p 0 1 1
chr1:203736726|203736907 hsa-miR-220b 0 0 1
chr1:203736726|203736907 hsa-miR-1254 0 0 1
chr1:203736726|203736907 hsa-miR-608 1 0 0
chr1:203736726|203736907 hsa-miR-637 1 0 0
chr1:203736726|203736907 hsa-miR-1261 1 0 0
chr1:203736726|203736907 hsa-miR-2110 1 0 0
chr1:203736726|203736907 hsa-miR-548q 0 1 0
chr1:203736726|203736907 hsa-miR-3176 0 1 0
chr1:203736726|203736907 hsa-miR-4436a 1 0 0
chr1:203736726|203736907 hsa-miR-4489 0 1 0
chr1:203736726|203736907 hsa-miR-4498 0 1 0
chr1:203736726|203736907 hsa-miR-4502 0 1 0
chr1:203736726|203736907 hsa-miR-4518 0 1 0
chr1:203736726|203736907 hsa-miR-4642 1 1 0
chr1:203736726|203736907 hsa-miR-4741 0 1 0
chr1:203736726|203736907 hsa-miR-7974 0 1 0
chr1:203736726|203736907 hsa-miR-8089 1 0 0
chr1:203736726|203736907 hsa-miR-500b-3p 0 1 0
chr1:203736726|203736907 hsa-miR-210-3p 1 0 0
chr1:203736726|203736907 hsa-miR-6857-5p 1 0 0
chr1:203736726|203736907 hsa-miR-6890-5p 1 0 0
chr1:203736726|203736907 hsa-miR-6727-5p 1 0 0
chr1:203736726|203736907 hsa-miR-3622b-5p 0 1 0
chr1:203736726|203736907 hsa-miR-4761-3p 0 1 0
chr1:203736726|203736907 hsa-miR-185-3p 1 1 0
chr1:203736726|203736907 hsa-miR-6810-5p 1 1 0
chr1:203736726|203736907 hsa-miR-6884-3p 1 0 0
chr1:203736726|203736907 hsa-miR-1226-5p 1 1 0
chr1:203736726|203736907 hsa-miR-3944-3p 1 0 0
chr1:203736726|203736907 hsa-miR-4640-5p 1 0 0
chr1:203736726|203736907 hsa-miR-3667-3p 0 1 0
chr1:203736726|203736907 hsa-miR-6823-5p 0 1 0
chr1:203736726|203736907 hsa-miR-4446-3p 1 1 0
chr1:203736726|203736907 hsa-miR-149-3p 0 1 0
chr1:203736726|203736907 hsa-miR-3191-3p 1 0 0
chr1:203736726|203736907 hsa-miR-6793-3p 0 1 0
chr1:203736726|203736907 hsa-miR-383-3p 0 1 0
chr1:203736726|203736907 hsa-miR-5004-5p 1 0 0
chr1:203736726|203736907 hsa-miR-3675-5p 0 1 0
chr1:203736726|203736907 hsa-miR-4763-3p 0 1 0
chr1:203736726|203736907 hsa-miR-6775-5p 1 0 0
chr1:203736726|203736907 hsa-miR-6756-5p 1 0 0
chr1:203736726|203736907 hsa-miR-6763-5p 1 0 0
chr1:203736726|203736907 hsa-miR-6797-5p 1 0 0
chr1:203736726|203736907 hsa-miR-3127-3p 0 1 0
chr1:203736726|203736907 hsa-miR-328-5p 1 0 0
chr1:203736726|203736907 hsa-miR-4649-5p 1 0 0
chr1:203736726|203736907 hsa-miR-4685-5p 1 1 0
chr1:203736726|203736907 hsa-miR-4749-5p 1 0 0
chr1:203736726|203736907 hsa-miR-6794-5p 1 0 0
chr1:203736726|203736907 hsa-miR-6795-5p 1 0 0
chr1:203736726|203736907 hsa-miR-6887-5p 1 0 0
chr1:203736726|203736907 hsa-miR-4758-5p 1 0 0
chr1:203736726|203736907 hsa-miR-6856-5p 0 1 0
chr1:203736726|203736907 hsa-miR-6756-3p 0 1 0
chr1:203736726|203736907 hsa-miR-6511b-3p 1 0 0
chr1:203736726|203736907 hsa-miR-6764-5p 0 1 0
chr1:203736726|203736907 hsa-miR-556-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:203736726|203736907
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MSPYTAHAPGIMLQEGEMPALGGLVVI
Nucleotide Sequence TTGTCCCCATACACTGCTCATGCACCAGGCATCATGCTCCAGGAAGGGGAGATGCCAGCCCTGGGTGGATTGGTGGTGATATAG
CircID chr1:203736726|203736907
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MIVHQHVFSEASAGVGASWHSPMPS
Nucleotide Sequence ATGATTGTTCATCAGCATGTGTTCTCTGAGGCCAGTGCTGGAGTTGGGGCATCCTGGCACAGCCCCATGCCCTCT
CircID chr1:203736726|203736907
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MSCPHTLLMHQASCSRKGRCQPWVDWW
Nucleotide Sequence CTGTCTTGTCCCCATACACTGCTCATGCACCAGGCATCATGCTCCAGGAAGGGGAGATGCCAGCCCTGGGTGGATTGGTGGTGA
CircID chr1:203736726|203736907
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MPQLQHWPQRTHADEQSCTISPPIHPGLASPLPGA
Nucleotide Sequence ATGCCCCAACTCCAGCACTGGCCTCAGAGAACACATGCTGATGAACAATCATGCACTATATCACCACCAATCCACCCAGGGCTGGCATCTCCCCTTCCTGGAGCATGA
CircID chr1:203736726|203736907
ORF Type ORF5
Protein Length 41
Nucleotide Length 123
Protein Sequence MLMNNHALYHHQSTQGWHLPFLEHDAWCMSSVWGQDRASEE
Nucleotide Sequence ATGCTGATGAACAATCATGCACTATATCACCACCAATCCACCCAGGGCTGGCATCTCCCCTTCCTGGAGCATGATGCCTGGTGCATGAGCAGTGTATGGGGACAAGACAGGGCTAGTGAAGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab